version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2650 49.37 +1 3483363..3484958 + 531 73670210 - Mbar_A2742 - hypothetical protein 2651 35.01 -1 3486213..3486629 + 138 73670211 - Mbar_A2743 - CopG family transcriptional regulator 2652 41.22 0 3487929..3489335 + 468 73670212 - Mbar_A2744 - glutamate decarboxylase 2653 36.69 -1 3489922..3490665 + 247 73670213 - Mbar_A2745 - hypothetical protein 2654 31.90 -2 3490715..3490924 + 69 73670214 - Mbar_A2746 - hypothetical protein 2655 42.73 0 3491738..3492748 - 336 73670215 - Mbar_A2747 - hypothetical protein 2656 42.23 0 3493242..3494039 + 265 73670216 - Mbar_A2748 - hypothetical protein 2657 41.27 0 3494106..3494420 + 104 73670217 - Mbar_A2749 - hypothetical protein 2658 41.95 0 3494945..3495571 + 208 73670218 - Mbar_A2750 - hypothetical protein 2659 42.66 0 3495687..3497873 - 728 73670219 - Mbar_A2751 - cell surface protein 2660 46.61 +1 3498494..3500128 - 544 73670220 pheT Mbar_A2752 - phenylalanyl-tRNA synthetase subunit beta 2661 45.19 0 3500465..3501139 + 224 73670221 rnhB Mbar_A2753 - ribonuclease HII 2662 39.28 0 3501288..3502313 - 341 73670222 - Mbar_A2754 - cell surface glycoprotein (S-layer protein) 2663 48.93 +1 3502798..3503496 - 232 73670223 - Mbar_A2755 - phosphoribosylformylglycinamidine synthase subunit I 2664 43.25 0 3503559..3503810 - 83 73670224 - Mbar_A2756 - phosphoribosylformylglycinamidine synthase subunit PurS 2665 31.08 -2 3504872..3505936 - 354 73670225 - Mbar_A2758 - transposase, putative 2666 46.99 +1 3507060..3508055 + 331 73670226 - Mbar_A2759 - hypothetical protein 2667 40.58 0 3508328..3508603 + 91 73670227 - Mbar_A2760 - hypothetical protein 2668 28.25 -2 3508977..3509468 - 163 73670228 - Mbar_A2761 - hypothetical protein 2669 41.67 0 3509814..3510605 + 263 73670229 - Mbar_A2762 - hypothetical protein 2670 47.41 +1 3510816..3511724 - 302 73670230 - Mbar_A2763 - hypothetical protein 2671 39.19 0 3511763..3512803 - 346 73670231 - Mbar_A2764 - hypothetical protein 2672 45.11 0 3513015..3514118 - 367 73670232 - Mbar_A2765 - DNA polymerase IV 2673 33.74 -1 3514441..3515670 - 409 73670233 - Mbar_A2766 - cell surface protein 2674 38.61 0 3516326..3516856 + 176 73670234 - Mbar_A2767 - hypothetical protein 2675 37.47 0 3516857..3518233 + 458 73670235 - Mbar_A2768 - hypothetical protein 2676 50.00 +1 3518259..3518522 + 87 73670236 - Mbar_A2769 - L-sorbosone dehydrogenase 2677 39.97 0 3519992..3520609 + 205 73670237 - Mbar_A2770 - hypothetical protein 2678 47.38 +1 3520722..3521867 + 381 73670238 - Mbar_A2771 - L-sorbosone dehydrogenase 2679 38.95 0 3521952..3522236 + 94 73670239 - Mbar_A2772 - methyltransferase 2680 37.27 0 3523029..3523409 - 126 73670240 - Mbar_A2774 - transposase 2681 41.06 0 3523974..3525461 + 495 73670241 - Mbar_A2775 - MoaA/NifB/PqqE family protein 2682 42.68 0 3526255..3527217 + 320 73670242 - Mbar_A2776 - hypothetical protein 2683 43.24 0 3527834..3530053 + 739 73670243 - Mbar_A2777 - H(+)-transporting ATPase 2684 43.03 0 3530865..3533297 + 810 73670244 - Mbar_A2778 - H(+)-transporting ATPase 2685 39.28 0 3533580..3534521 + 313 73670245 - Mbar_A2779 - hypothetical protein 2686 39.74 0 3534688..3535593 - 301 73670246 - Mbar_A2780 - hypothetical protein 2687 35.82 -1 3535594..3536640 - 348 73670247 - Mbar_A2781 - hypothetical protein 2688 44.47 0 3538015..3544383 - 2122 73670248 - Mbar_A2782 - cell surface protein 2689 44.19 0 3545597..3551599 - 2000 73670249 - Mbar_A2783 - cell surface protein 2690 40.65 0 3552425..3553504 - 359 73670250 - Mbar_A2784 - cell surface glycoprotein 2691 44.78 0 3555451..3556542 - 363 73670251 - Mbar_A2785 - hypothetical protein 2692 43.55 0 3556718..3557647 - 309 73670252 - Mbar_A2786 - hypothetical protein 2693 42.87 0 3557682..3558866 - 394 73670253 - Mbar_A2787 - putative ABC transport system permease protein 2694 41.50 0 3559308..3560483 + 391 73670254 - Mbar_A2788 - hypothetical protein 2695 27.34 -2 3561428..3561844 + 138 73670255 - Mbar_A2789 - transposase 2696 31.61 -2 3561894..3562241 - 115 73670256 - Mbar_A2790 - hypothetical protein 2697 37.43 0 3562367..3563221 + 284 73670257 - Mbar_A2791 - hypothetical protein 2698 37.17 0 3563792..3564991 - 399 73670258 - Mbar_A2792 - hypothetical protein 2699 40.58 0 3565091..3566815 - 574 73670259 - Mbar_A2793 - hypothetical protein 2700 39.67 0 3567701..3569356 + 551 73670260 - Mbar_A2794 - hypothetical protein 2701 43.21 0 3570555..3573440 + 961 73670261 - Mbar_A2795 - hypothetical protein 2702 35.96 -1 3573489..3573755 - 88 73670262 - Mbar_A2796 - hypothetical protein 2703 43.15 0 3574085..3574909 + 274 73670263 - Mbar_A2797 - hypothetical protein 2704 45.41 0 3574971..3575591 - 206 73670264 - Mbar_A2798 - hypothetical protein 2705 37.31 0 3576455..3578617 + 720 73670265 - Mbar_A2800 - hypothetical protein 2706 32.07 -2 3578630..3579655 + 341 73670266 - Mbar_A2801 - hypothetical protein 2707 41.32 0 3580100..3581389 + 429 73670267 - Mbar_A2802 - hypothetical protein 2708 32.58 -1 3582014..3582544 + 176 73670268 - Mbar_A2803 - hypothetical protein 2709 46.18 0 3583914..3586763 - 949 73670269 - Mbar_A2804 - DNA gyrase subunit A 2710 46.00 0 3586775..3588676 - 633 73670270 - Mbar_A2805 - DNA gyrase subunit B 2711 46.94 +1 3589714..3590823 - 369 73670271 - Mbar_A2806 - DNA topoisomerase VI subunit A 2712 45.50 0 3590825..3592690 - 621 73670272 - Mbar_A2807 - DNA topoisomerase VI subunit B 2713 38.53 0 3593356..3593586 - 76 73670273 - Mbar_A2808 - AsnC family transcriptional regulator 2714 44.18 0 3593777..3594403 + 208 73670274 - Mbar_A2809 - divalent cation transporter 2715 44.04 0 3594400..3594978 + 192 73670275 - Mbar_A2810 - divalent cation transporter 2716 46.33 0 3595138..3596337 + 399 73670276 - Mbar_A2811 - potassium channel protein 2717 44.63 0 3596628..3596804 + 58 73670277 - Mbar_A2812 - hypothetical protein 2718 44.93 0 3597301..3597507 + 68 73670278 - Mbar_A2813 - hypothetical protein 2719 41.37 0 3597831..3598415 + 194 73670279 - Mbar_A2814 - PBP family phospholipid-binding protein 2720 44.32 0 3598438..3598983 + 181 73670280 - Mbar_A2815 - methionine sulfoxide reductase A 2721 36.74 -1 3599188..3600009 + 273 73670281 - Mbar_A2816 - hypothetical protein 2722 34.56 -1 3600227..3601201 + 324 73670282 - Mbar_A2817 - hypothetical protein 2723 44.90 0 3601317..3602414 + 365 73670283 - Mbar_A2818 - NADH peroxidase 2724 47.32 +1 3602682..3603260 + 192 73670284 - Mbar_A2819 - MerR family transcriptional regulator 2725 46.85 +1 3603365..3603808 + 147 73670285 - Mbar_A2820 - hypothetical protein 2726 43.76 0 3603917..3605575 + 552 73670286 - Mbar_A2821 - acyl-CoA synthetase 2727 47.84 +1 3607446..3608231 - 261 73670287 - Mbar_A2822 - cobalt transport protein 2728 44.82 0 3608228..3609733 - 501 73670288 - Mbar_A2823 - putative cobalt transport system ATP-binding protein 2729 51.85 +2 3609730..3609891 - 53 73670289 - Mbar_A2824 - hypothetical protein 2730 45.79 0 3609981..3610253 - 90 73670290 - Mbar_A2825 - hypothetical protein 2731 45.67 0 3610764..3611687 + 307 73670291 - Mbar_A2826 - hypothetical protein 2732 36.98 0 3611982..3613106 + 374 73670292 - Mbar_A2827 - hypothetical protein 2733 34.64 -1 3613146..3613451 + 101 73670293 - Mbar_A2828 - hypothetical protein 2734 46.55 +1 3613583..3614452 + 289 73670294 - Mbar_A2829 - phosphohydrolase 2735 30.75 -2 3614667..3615092 + 141 73670295 - Mbar_A2830 - hypothetical protein 2736 34.78 -1 3615590..3616141 - 183 73670296 - Mbar_A2831 - hypothetical protein 2737 36.16 -1 3617078..3617608 + 176 73670297 - Mbar_A2832 - hypothetical protein 2738 32.58 -1 3617919..3618182 - 87 73670298 - Mbar_A2833 - hypothetical protein 2739 45.71 0 3618451..3620535 - 694 73670299 - Mbar_A2834 - PgPepO oligopeptidase 2740 48.22 +1 3621182..3622162 - 326 73670300 - Mbar_A2835 - sodium-dependent transporter 2741 32.34 -1 3622831..3623031 + 66 73670301 - Mbar_A2836 - transposase 2742 30.72 -2 3623180..3623485 - 101 73670302 - Mbar_A2837 - hypothetical protein 2743 44.00 0 3623965..3624939 + 324 73670303 - Mbar_A2838 - fructokinase 2744 43.83 0 3625066..3625665 - 199 73670304 - Mbar_A2839 - hypothetical protein 2745 46.44 0 3625845..3626729 - 294 73670305 - Mbar_A2840 - heat shock protein HtpX 2746 42.23 0 3627723..3628868 - 381 73670306 - Mbar_A2841 - serine/threonine protein kinase 2747 38.46 0 3629846..3631873 + 675 73670307 - Mbar_A2842 - hypothetical protein 2748 45.75 0 3632006..3634744 + 912 73670308 - Mbar_A2843 - ATP-dependant helicase 2749 38.39 0 3634896..3637901 - 1001 73670309 - Mbar_A2844 - hypothetical protein 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0