version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2520 47.84 +1 3299758..3300915 + 385 73670080 - Mbar_A2605 - aspartate aminotransferase 2521 46.46 0 3301110..3301688 - 192 73670081 - Mbar_A2606 - hypothetical protein 2522 51.53 +2 3303132..3304538 + 468 73670082 - Mbar_A2608 - hypothetical protein 2523 47.57 +1 3304981..3306174 - 397 73670083 - Mbar_A2609 - mRNA 3-end processing factor 2524 39.39 0 3306289..3306651 + 120 73670084 - Mbar_A2610 - hypothetical protein 2525 43.94 0 3306692..3306955 + 87 73670085 - Mbar_A2611 - hypothetical protein 2526 36.55 -1 3307033..3307281 - 82 73670086 - Mbar_A2612 - hypothetical protein 2527 41.11 0 3307250..3307519 - 89 73670087 - Mbar_A2613 - hypothetical protein 2528 41.59 0 3307613..3307939 + 108 73670088 - Mbar_A2614 - hypothetical protein 2529 41.87 0 3308261..3309103 - 280 73670089 - Mbar_A2615 - ATP-binding protein involved in chromosome partitioning 2530 44.17 0 3310345..3311304 + 319 73670090 - Mbar_A2616 - hypothetical protein 2531 45.13 0 3311304..3311642 + 112 73670091 - Mbar_A2617 - branched chain amino acid transport protein AzlD 2532 45.22 0 3311954..3312811 + 285 73670092 - Mbar_A2618 - sulfite reductase, beta subunit 2533 39.09 0 3313304..3313807 + 167 73670093 - Mbar_A2619 - hypothetical protein 2534 39.44 0 3313894..3314613 + 239 73670094 - Mbar_A2620 - hypothetical protein 2535 32.91 -1 3314883..3318677 - 1264 73670095 - Mbar_A2621 - hypothetical protein 2536 42.72 0 3319274..3319486 - 70 73670096 - Mbar_A2622 - hypothetical protein 2537 47.29 +1 3321011..3321361 - 116 73670097 - Mbar_A2624 - hypothetical protein 2538 44.79 0 3322131..3322619 + 162 73670098 - Mbar_A2625 - hypothetical protein 2539 41.00 0 3323109..3323447 + 112 73670099 - Mbar_A2626 - 6-pyruvoyltetrahydropterin synthase 2540 46.44 0 3323605..3324672 - 355 73670100 - Mbar_A2627 - hypothetical protein 2541 38.83 0 3324871..3325143 + 90 73670101 - Mbar_A2628 - hypothetical protein 2542 43.49 0 3326036..3326557 + 173 73670102 - Mbar_A2630 - hypothetical protein 2543 34.83 -1 3328164..3328898 + 244 73670103 - Mbar_A2631 - hypothetical protein 2544 46.11 0 3329689..3331269 + 526 73670104 - Mbar_A2632 - phosphoenolpyruvate carboxylase 2545 38.75 0 3331390..3332127 - 245 73670105 - Mbar_A2633 - cell surface protein 2546 35.54 -1 3332704..3333246 - 180 73670106 - Mbar_A2635 - hypothetical protein 2547 47.60 +1 3333890..3335326 + 478 73670107 - Mbar_A2636 - integral membrane protein 2548 39.00 0 3336701..3337159 + 152 73670108 - Mbar_A2637 - MarR family transcriptional regulator 2549 37.39 0 3337877..3338344 - 155 73670109 - Mbar_A2638 - transposase 2550 43.97 0 3338894..3340096 + 400 73670110 - Mbar_A2639 - aldo/keto reductase 2551 36.21 -1 3340409..3341902 - 497 73670111 - Mbar_A2640 - hypothetical protein 2552 37.00 0 3342272..3342598 - 108 73670112 - Mbar_A2641 - hypothetical protein 2553 43.01 0 3342723..3344438 - 571 73670113 - Mbar_A2642 - hypothetical protein 2554 45.60 0 3344599..3346074 - 491 73670114 - Mbar_A2643 - DNA repair helicase RAD25 2555 36.69 -1 3346647..3347033 + 128 73670115 - Mbar_A2644 - hypothetical protein 2556 39.68 0 3347178..3347366 + 62 73670116 - Mbar_A2645 - hypothetical protein 2557 43.13 0 3348875..3351508 - 877 73670117 - Mbar_A2646 - hypothetical protein 2558 43.21 0 3351505..3353508 - 667 73670118 - Mbar_A2647 - hypothetical protein 2559 42.18 0 3353517..3354443 - 308 73670119 - Mbar_A2648 - hypothetical protein 2560 44.90 0 3354619..3355638 - 339 73670120 - Mbar_A2649 - moxR-like ATPase 2561 38.60 0 3355655..3356509 - 284 73670121 - Mbar_A2650 - hypothetical protein 2562 24.55 -2 3357006..3358223 + 405 73670122 - Mbar_A2651 - hypothetical protein 2563 33.51 -1 3358595..3361354 - 919 73670123 - Mbar_A2652 - hypothetical protein 2564 50.08 +1 3362031..3362675 - 214 73670124 - Mbar_A2653 - ABC transporter, ATP-binding protein 2565 46.35 0 3362864..3364069 - 401 73670125 - Mbar_A2654 - ABC transporter, permease protein 2566 43.50 0 3364315..3365868 - 517 73670126 - Mbar_A2655 - hypothetical protein 2567 46.76 +1 3366189..3367469 - 426 73670127 - Mbar_A2656 - Na(+)-linked D-alanine glycine permease 2568 34.88 -1 3367842..3368099 + 85 73670128 - Mbar_A2657 - hypothetical protein 2569 42.42 0 3368258..3368851 - 197 73670129 - Mbar_A2658 - hypothetical protein 2570 39.02 0 3369234..3369497 - 87 73670130 - Mbar_A2659 - hypothetical protein 2571 42.47 0 3369590..3369808 - 72 73670131 - Mbar_A2660 - hypothetical protein 2572 37.59 0 3369805..3369945 - 46 73670132 - Mbar_A2661 - hypothetical protein 2573 40.76 0 3370021..3373251 - 1076 73670133 - Mbar_A2662 - putative type I restriction enzyme R protein 2574 33.59 -1 3373408..3374172 + 254 73670134 - Mbar_A2663 - hypothetical protein 2575 38.57 0 3374459..3375031 - 190 73670135 - Mbar_A2664 - hypothetical protein 2576 34.60 -1 3375000..3376340 - 446 73670136 - Mbar_A2665 - type I restriction-modification system specificity subunit 2577 45.65 0 3376340..3377866 - 508 73670137 - Mbar_A2666 - type I restriction-modification system specificity subunit 2578 44.65 0 3378199..3378516 + 105 73670138 - Mbar_A2667 - hypothetical protein 2579 44.56 0 3378757..3379878 - 373 73670139 - Mbar_A2668 - hypothetical protein 2580 49.02 +1 3382454..3382963 - 169 73670140 - Mbar_A2669 - hypothetical protein 2581 39.15 0 3383206..3385113 - 635 73670141 - Mbar_A2670 - hypothetical protein 2582 39.62 0 3385693..3386598 + 301 73670142 - Mbar_A2671 - hypothetical protein 2583 46.31 0 3386776..3387684 - 302 73670143 - Mbar_A2672 - hypothetical protein 2584 42.63 0 3388661..3389854 - 397 73670144 - Mbar_A2674 - molybdenum cofactor biosynthesis protein MoeA2 2585 41.90 0 3390133..3390774 + 213 73670145 - Mbar_A2675 - molybdopterin converting factor, subunit 2 2586 40.44 0 3390771..3390953 + 60 73670146 - Mbar_A2676 - hypothetical protein 2587 33.33 -1 3390925..3391086 + 53 73670147 - Mbar_A2677 - hypothetical protein 2588 28.75 -2 3391222..3391548 - 108 73670148 - Mbar_A2678 - hypothetical protein 2589 43.40 0 3393252..3395912 - 886 73670149 - Mbar_A2680 - sensory transduction histidine kinase 2590 37.22 0 3396433..3396792 + 119 73670150 - Mbar_A2681 - hypothetical protein 2591 29.67 -2 3396965..3397237 + 90 73670151 - Mbar_A2682 - putative transposase 2592 35.39 -1 3397433..3398161 - 242 73670152 - Mbar_A2683 - hypothetical protein 2593 41.00 0 3399471..3400748 - 425 73670153 - Mbar_A2684 - hypothetical protein 2594 42.31 0 3401334..3402782 + 482 73670154 - Mbar_A2685 - homospermidine synthase 2595 32.69 -1 3403503..3404276 - 257 73670155 - Mbar_A2686 - hypothetical protein 2596 39.32 0 3404483..3405667 - 394 73670156 - Mbar_A2687 - hypothetical protein 2597 40.74 0 3406067..3406552 + 161 73670157 - Mbar_A2688 - hypothetical protein 2598 42.01 0 3406638..3408377 + 579 73670158 - Mbar_A2689 - uncharacterized ABC transporter, ATPase component 2599 44.05 0 3408364..3410211 + 615 73670159 - Mbar_A2690 - multidrug resistance ABC transporter 2600 42.86 0 3410769..3413171 - 800 73670160 - Mbar_A2691 - hypothetical protein 2601 34.81 -1 3414286..3416865 + 859 73670161 - Mbar_A2692 - hypothetical protein 2602 40.10 0 3416868..3417059 + 63 73670162 - Mbar_A2693 - hypothetical protein 2603 36.03 -1 3417365..3418477 - 370 73670163 - Mbar_A2694 - transposase 2604 31.91 -2 3418637..3418918 + 93 73670164 - Mbar_A2695 - transposase 2605 43.33 0 3419074..3420504 + 476 73670165 - Mbar_A2696 - dihydrolipoamide dehydrogenase 2606 36.43 -1 3421000..3422388 - 462 73670166 - Mbar_A2697 - hypothetical protein 2607 38.10 0 3422504..3423322 + 272 73670167 - Mbar_A2698 - hypothetical protein 2608 40.69 0 3423670..3424077 + 135 73670168 - Mbar_A2699 - putative inorganic pyrophosphatase 2609 45.32 0 3424584..3425726 + 380 73670169 - Mbar_A2700 - arylsulfatase regulator 2610 38.66 0 3426009..3426365 + 118 73670170 - Mbar_A2701 - hypothetical protein 2611 47.99 +1 3426879..3428174 - 431 73670171 - Mbar_A2702 - nitrogenase-related protein 2612 48.77 +1 3428171..3430411 - 746 73670172 - Mbar_A2703 - nitrogen fixation protein NifH/NifE 2613 32.47 -1 3430955..3432700 - 581 73670173 - Mbar_A2704 - hypothetical protein 2614 37.67 0 3433123..3433491 + 122 73670174 - Mbar_A2705 - iron-sulfur cluster-binding protein 2615 35.99 -1 3433518..3435398 - 626 73670175 - Mbar_A2706 - hypothetical protein 2616 37.48 0 3435670..3436392 - 240 73670176 - Mbar_A2707 - hypothetical protein 2617 46.35 0 3436983..3438995 - 670 73670177 - Mbar_A2708 - excinuclease ABC subunit B 2618 44.23 0 3439130..3440689 - 519 73670178 uvrC Mbar_A2709 - excinuclease ABC subunit C 2619 47.31 +1 3440912..3443938 - 1008 73670179 - Mbar_A2710 - excinuclease ABC subunit A 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0