version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2482 47.30 +1 3236402..3236716 - 104 73670042 - Mbar_A2564 - cobalamin biosynthesis protein 2483 43.75 0 3236726..3237445 - 239 73670043 - Mbar_A2565 - cobalt transport protein CbiM 2484 43.89 0 3239024..3240577 - 517 73670044 - Mbar_A2567 - heteropolysaccharide repeat-containing protein 2485 39.95 0 3240599..3241006 - 135 73670045 - Mbar_A2568 - hypothetical protein 2486 42.03 0 3242491..3244008 - 505 73670046 - Mbar_A2569 - surface layer protein B 2487 39.50 0 3244686..3245204 + 172 73670047 - Mbar_A2570 - hypothetical protein 2488 29.60 -2 3246835..3248787 + 650 73670048 - Mbar_A2572 - hypothetical protein 2489 34.10 -1 3248771..3249553 + 260 73670049 - Mbar_A2573 - hypothetical protein 2490 33.33 -1 3250160..3250588 + 142 73670050 - Mbar_A2574 - helicase 2491 39.76 0 3250739..3251158 + 139 73670051 - Mbar_A2575 - MarR family transcriptional regulator 2492 46.41 0 3251244..3253652 + 802 73670052 - Mbar_A2576 - ATP-dependent protease La 2493 40.49 0 3254455..3254943 + 162 73670053 - Mbar_A2577 - thioredoxin 2494 40.12 0 3255324..3257003 - 559 73670054 - Mbar_A2578 - 2-octaprenylphenol hydroxylase 2495 42.78 0 3257197..3258096 - 299 73670055 - Mbar_A2579 - hypothetical protein 2496 41.41 0 3258763..3259431 + 222 73670056 - Mbar_A2580 - iron-sulfur flavoprotein 2497 44.86 0 3259601..3260815 - 404 73670057 - Mbar_A2581 - membrane transport protein 2498 43.73 0 3261199..3261996 + 265 73670058 - Mbar_A2582 - hypothetical protein 2499 44.66 0 3262156..3262782 + 208 73670059 - Mbar_A2583 - hypothetical protein 2500 40.62 0 3263043..3264482 - 479 73670060 - Mbar_A2584 - surface antigen gene 2501 30.84 -2 3264650..3265210 - 186 73670061 - Mbar_A2585 - hypothetical protein 2502 43.66 0 3266569..3266994 + 141 73670062 - Mbar_A2586 - universal stress protein 2503 37.50 0 3267076..3267291 - 71 73670063 - Mbar_A2587 - hypothetical protein 2504 48.94 +1 3267535..3268995 - 486 73670064 - Mbar_A2588 - formylmethanofuran dehydrogenase, subunit F 2505 49.05 +1 3268995..3271373 - 792 73670065 - Mbar_A2589 - CoB--CoM heterodisulfide reductase subunit A 2506 37.77 0 3274333..3275640 + 435 73670066 - Mbar_A2591 - transposase 2507 32.59 -1 3276062..3276466 + 134 73670067 - Mbar_A2592 - transposase 2508 38.94 0 3277218..3278447 + 409 73670068 - Mbar_A2593 - hypothetical protein 2509 38.50 0 3278659..3280632 + 657 73670069 - Mbar_A2594 - hypothetical protein 2510 37.82 0 3281893..3282360 + 155 73670070 - Mbar_A2595 - transposase 2511 47.44 +1 3282741..3283385 + 214 73670071 - Mbar_A2596 - hypothetical protein 2512 40.38 0 3283973..3287689 + 1238 73670072 - Mbar_A2597 - hypothetical protein 2513 39.00 0 3287892..3288350 + 152 73670073 - Mbar_A2598 - hypothetical protein 2514 45.80 0 3288489..3289916 + 475 73670074 - Mbar_A2599 - putrescine-ornithine antiporter 2515 39.85 0 3290043..3290579 + 178 73670075 - Mbar_A2600 - hypothetical protein 2516 42.38 0 3290886..3291692 + 268 73670076 - Mbar_A2601 - hypothetical protein 2517 35.53 -1 3294551..3295051 + 166 73670077 - Mbar_A2602 - hypothetical protein 2518 35.26 -1 3295056..3296354 + 432 73670078 - Mbar_A2603 - hypothetical protein 2519 35.42 -1 3296434..3299217 - 927 73670079 - Mbar_A2604 - TPR repeat-containing protein 2520 47.84 +1 3299758..3300915 + 385 73670080 - Mbar_A2605 - aspartate aminotransferase 2521 46.46 0 3301110..3301688 - 192 73670081 - Mbar_A2606 - hypothetical protein 2522 51.53 +2 3303132..3304538 + 468 73670082 - Mbar_A2608 - hypothetical protein 2523 47.57 +1 3304981..3306174 - 397 73670083 - Mbar_A2609 - mRNA 3-end processing factor 2524 39.39 0 3306289..3306651 + 120 73670084 - Mbar_A2610 - hypothetical protein 2525 43.94 0 3306692..3306955 + 87 73670085 - Mbar_A2611 - hypothetical protein 2526 36.55 -1 3307033..3307281 - 82 73670086 - Mbar_A2612 - hypothetical protein 2527 41.11 0 3307250..3307519 - 89 73670087 - Mbar_A2613 - hypothetical protein 2528 41.59 0 3307613..3307939 + 108 73670088 - Mbar_A2614 - hypothetical protein 2529 41.87 0 3308261..3309103 - 280 73670089 - Mbar_A2615 - ATP-binding protein involved in chromosome partitioning 2530 44.17 0 3310345..3311304 + 319 73670090 - Mbar_A2616 - hypothetical protein 2531 45.13 0 3311304..3311642 + 112 73670091 - Mbar_A2617 - branched chain amino acid transport protein AzlD 2532 45.22 0 3311954..3312811 + 285 73670092 - Mbar_A2618 - sulfite reductase, beta subunit 2533 39.09 0 3313304..3313807 + 167 73670093 - Mbar_A2619 - hypothetical protein 2534 39.44 0 3313894..3314613 + 239 73670094 - Mbar_A2620 - hypothetical protein 2535 32.91 -1 3314883..3318677 - 1264 73670095 - Mbar_A2621 - hypothetical protein 2536 42.72 0 3319274..3319486 - 70 73670096 - Mbar_A2622 - hypothetical protein 2537 47.29 +1 3321011..3321361 - 116 73670097 - Mbar_A2624 - hypothetical protein 2538 44.79 0 3322131..3322619 + 162 73670098 - Mbar_A2625 - hypothetical protein 2539 41.00 0 3323109..3323447 + 112 73670099 - Mbar_A2626 - 6-pyruvoyltetrahydropterin synthase 2540 46.44 0 3323605..3324672 - 355 73670100 - Mbar_A2627 - hypothetical protein 2541 38.83 0 3324871..3325143 + 90 73670101 - Mbar_A2628 - hypothetical protein 2542 43.49 0 3326036..3326557 + 173 73670102 - Mbar_A2630 - hypothetical protein 2543 34.83 -1 3328164..3328898 + 244 73670103 - Mbar_A2631 - hypothetical protein 2544 46.11 0 3329689..3331269 + 526 73670104 - Mbar_A2632 - phosphoenolpyruvate carboxylase 2545 38.75 0 3331390..3332127 - 245 73670105 - Mbar_A2633 - cell surface protein 2546 35.54 -1 3332704..3333246 - 180 73670106 - Mbar_A2635 - hypothetical protein 2547 47.60 +1 3333890..3335326 + 478 73670107 - Mbar_A2636 - integral membrane protein 2548 39.00 0 3336701..3337159 + 152 73670108 - Mbar_A2637 - MarR family transcriptional regulator 2549 37.39 0 3337877..3338344 - 155 73670109 - Mbar_A2638 - transposase 2550 43.97 0 3338894..3340096 + 400 73670110 - Mbar_A2639 - aldo/keto reductase 2551 36.21 -1 3340409..3341902 - 497 73670111 - Mbar_A2640 - hypothetical protein 2552 37.00 0 3342272..3342598 - 108 73670112 - Mbar_A2641 - hypothetical protein 2553 43.01 0 3342723..3344438 - 571 73670113 - Mbar_A2642 - hypothetical protein 2554 45.60 0 3344599..3346074 - 491 73670114 - Mbar_A2643 - DNA repair helicase RAD25 2555 36.69 -1 3346647..3347033 + 128 73670115 - Mbar_A2644 - hypothetical protein 2556 39.68 0 3347178..3347366 + 62 73670116 - Mbar_A2645 - hypothetical protein 2557 43.13 0 3348875..3351508 - 877 73670117 - Mbar_A2646 - hypothetical protein 2558 43.21 0 3351505..3353508 - 667 73670118 - Mbar_A2647 - hypothetical protein 2559 42.18 0 3353517..3354443 - 308 73670119 - Mbar_A2648 - hypothetical protein 2560 44.90 0 3354619..3355638 - 339 73670120 - Mbar_A2649 - moxR-like ATPase 2561 38.60 0 3355655..3356509 - 284 73670121 - Mbar_A2650 - hypothetical protein 2562 24.55 -2 3357006..3358223 + 405 73670122 - Mbar_A2651 - hypothetical protein 2563 33.51 -1 3358595..3361354 - 919 73670123 - Mbar_A2652 - hypothetical protein 2564 50.08 +1 3362031..3362675 - 214 73670124 - Mbar_A2653 - ABC transporter, ATP-binding protein 2565 46.35 0 3362864..3364069 - 401 73670125 - Mbar_A2654 - ABC transporter, permease protein 2566 43.50 0 3364315..3365868 - 517 73670126 - Mbar_A2655 - hypothetical protein 2567 46.76 +1 3366189..3367469 - 426 73670127 - Mbar_A2656 - Na(+)-linked D-alanine glycine permease 2568 34.88 -1 3367842..3368099 + 85 73670128 - Mbar_A2657 - hypothetical protein 2569 42.42 0 3368258..3368851 - 197 73670129 - Mbar_A2658 - hypothetical protein 2570 39.02 0 3369234..3369497 - 87 73670130 - Mbar_A2659 - hypothetical protein 2571 42.47 0 3369590..3369808 - 72 73670131 - Mbar_A2660 - hypothetical protein 2572 37.59 0 3369805..3369945 - 46 73670132 - Mbar_A2661 - hypothetical protein 2573 40.76 0 3370021..3373251 - 1076 73670133 - Mbar_A2662 - putative type I restriction enzyme R protein 2574 33.59 -1 3373408..3374172 + 254 73670134 - Mbar_A2663 - hypothetical protein 2575 38.57 0 3374459..3375031 - 190 73670135 - Mbar_A2664 - hypothetical protein 2576 34.60 -1 3375000..3376340 - 446 73670136 - Mbar_A2665 - type I restriction-modification system specificity subunit 2577 45.65 0 3376340..3377866 - 508 73670137 - Mbar_A2666 - type I restriction-modification system specificity subunit 2578 44.65 0 3378199..3378516 + 105 73670138 - Mbar_A2667 - hypothetical protein 2579 44.56 0 3378757..3379878 - 373 73670139 - Mbar_A2668 - hypothetical protein 2580 49.02 +1 3382454..3382963 - 169 73670140 - Mbar_A2669 - hypothetical protein 2581 39.15 0 3383206..3385113 - 635 73670141 - Mbar_A2670 - hypothetical protein 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0