version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2424 45.22 0 3161834..3163339 + 501 73669984 - Mbar_A2506 - exosome complex exonuclease 1 2425 46.49 0 3163332..3164114 + 260 73669985 - Mbar_A2507 - exosome complex RNA-binding protein Rrp42 2426 49.12 +1 3164297..3164581 + 94 73669986 rpl37ae Mbar_A2508 - 50S ribosomal protein L37Ae 2427 43.48 0 3164602..3164739 + 45 73669987 - Mbar_A2509 - DNA-directed RNA polymerase subunit P 2428 41.98 0 3165281..3165754 - 157 73669988 - Mbar_A2510 - transcriptional regulator 2429 35.18 -1 3166635..3167825 + 396 73669989 - Mbar_A2511 - transposase 2430 45.57 0 3168531..3169241 - 236 73669990 - Mbar_A2512 - 3-oxoacyl-(acyl-carrier protein) reductase 2431 33.24 -1 3170339..3171421 + 360 73669991 - Mbar_A2513 - hypothetical protein 2432 44.44 0 3171612..3171872 - 86 73669992 - Mbar_A2514 - hypothetical protein 2433 46.00 0 3171980..3172816 - 278 73669993 - Mbar_A2515 - ABC transporter, permease protein 2434 45.76 0 3172820..3173632 - 270 73669994 - Mbar_A2516 - multidrug ABC transporter, ATP-binding protein 2435 43.57 0 3174185..3176509 + 774 73669995 - Mbar_A2517 - glycogen debranching enzyme 2436 43.86 0 3176615..3178315 - 566 73669996 - Mbar_A2518 - sulfate transporter 2437 39.39 0 3179247..3179609 + 120 73669997 - Mbar_A2519 - hypothetical protein 2438 32.53 -1 3180010..3180507 + 165 73669998 - Mbar_A2520 - putative acetyltransferase 2439 34.22 -1 3180725..3181174 + 149 73669999 - Mbar_A2521 - hypothetical protein 2440 40.25 0 3181268..3182482 - 404 73670000 - Mbar_A2522 - hypothetical protein 2441 37.02 0 3182635..3185022 - 795 73670001 - Mbar_A2523 - hypothetical protein 2442 43.87 0 3185115..3185522 + 135 73670002 - Mbar_A2524 - hypothetical protein 2443 30.03 -2 3185541..3185873 - 110 73670003 - Mbar_A2525 - hypothetical protein 2444 39.56 0 3186022..3188220 - 732 73670004 - Mbar_A2526 - hypothetical protein 2445 40.00 0 3188551..3188655 - 34 73670005 - Mbar_A2527 - hypothetical protein 2446 36.90 -1 3188930..3189517 - 195 73670006 - Mbar_A2528 - hypothetical protein 2447 47.44 +1 3190138..3191151 + 337 73670007 - Mbar_A2529 - hypothetical protein 2448 39.58 0 3191869..3192204 + 111 73670008 - Mbar_A2530 - hypothetical protein 2449 42.74 0 3192820..3193776 + 318 73670009 - Mbar_A2531 - hypothetical protein 2450 32.28 -1 3193870..3194058 - 62 73670010 - Mbar_A2532 - hypothetical protein 2451 38.00 0 3194897..3195196 - 99 73670011 - Mbar_A2533 - hypothetical protein 2452 38.27 0 3195397..3195801 - 134 73670012 - Mbar_A2534 - hypothetical protein 2453 50.00 +1 3197608..3197829 + 73 73670013 - Mbar_A2535 - DNA-directed RNA polymerase I, II, and III, 7.3 kDa polypeptide 2454 50.72 +1 3198225..3198431 + 68 73670014 - Mbar_A2536 - DNA-directed RNA polymerase I, II, and III, 7.3 kDa polypeptide 2455 46.74 +1 3199003..3199293 + 96 73670015 - Mbar_A2537 - translation initiation factor IF-1A 2456 46.57 +1 3199867..3200070 + 67 73670016 - Mbar_A2538 - hypothetical protein 2457 42.39 0 3200747..3200989 + 80 73670017 - Mbar_A2539 - hypothetical protein 2458 43.39 0 3201290..3201637 + 115 73670018 - Mbar_A2540 - translation initiation factor IF-1A 2459 45.93 0 3202315..3203949 - 544 73670019 - Mbar_A2541 - acetolactate synthase 2460 43.74 0 3204249..3205613 - 454 73670020 - Mbar_A2542 - aldehyde dehydrogenase 2461 43.12 0 3205903..3206280 + 125 73670021 - Mbar_A2543 - acidic integral membrane protein 2462 45.28 0 3206809..3212475 - 1888 73670022 - Mbar_A2544 - hypothetical protein 2463 41.21 0 3212817..3213743 - 308 73670023 - Mbar_A2545 - integral membrane protein 2464 41.63 0 3214453..3215235 - 260 73670024 - Mbar_A2546 - sec-independent protein translocase, protein 2465 44.57 0 3216096..3216878 + 260 73670025 - Mbar_A2547 - sec-independent protein translocase, protein 2466 45.04 0 3217008..3217400 + 130 73670026 - Mbar_A2548 - sec-independent protein translocase, protein 2467 44.44 0 3217675..3217980 + 101 73670027 - Mbar_A2549 - Sec-independent protein translocase TatA 2468 40.36 0 3218044..3218655 + 203 73670028 - Mbar_A2550 - hypothetical protein 2469 45.26 0 3218843..3219907 - 354 73670029 - Mbar_A2551 - pyruvate formate-lyase activating enzyme-like protein 2470 40.98 0 3220514..3222973 - 819 73670030 - Mbar_A2552 - sensory transduction histidine kinase 2471 42.20 0 3223271..3224545 - 424 73670031 - Mbar_A2553 - methyltransferase 2472 36.03 -1 3225153..3225449 - 98 73670032 - Mbar_A2554 - hypothetical protein 2473 31.08 -2 3225875..3226939 + 354 73670033 - Mbar_A2555 - transposase, putative 2474 35.47 -1 3227276..3227509 + 77 73670034 - Mbar_A2556 - hypothetical protein 2475 44.67 0 3227689..3227988 - 99 73670035 - Mbar_A2557 - hypothetical protein 2476 42.10 0 3228571..3229152 - 193 73670036 - Mbar_A2558 - hypothetical protein 2477 43.42 0 3230507..3231190 - 227 73670037 - Mbar_A2559 - molybdate ABC transporter, permease protein 2478 42.81 0 3231213..3232046 - 277 73670038 - Mbar_A2560 - molybdenum ABC transporter, solute-binding protein 2479 34.30 -1 3232533..3233363 - 276 73670039 - Mbar_A2561 - ribonuclease RN 2480 40.61 0 3234056..3234880 - 274 73670040 - Mbar_A2562 - ABC transporter, ATP-binding protein 2481 43.20 0 3234888..3235769 - 293 73670041 - Mbar_A2563 - cobalt transport protein 2482 47.30 +1 3236402..3236716 - 104 73670042 - Mbar_A2564 - cobalamin biosynthesis protein 2483 43.75 0 3236726..3237445 - 239 73670043 - Mbar_A2565 - cobalt transport protein CbiM 2484 43.89 0 3239024..3240577 - 517 73670044 - Mbar_A2567 - heteropolysaccharide repeat-containing protein 2485 39.95 0 3240599..3241006 - 135 73670045 - Mbar_A2568 - hypothetical protein 2486 42.03 0 3242491..3244008 - 505 73670046 - Mbar_A2569 - surface layer protein B 2487 39.50 0 3244686..3245204 + 172 73670047 - Mbar_A2570 - hypothetical protein 2488 29.60 -2 3246835..3248787 + 650 73670048 - Mbar_A2572 - hypothetical protein 2489 34.10 -1 3248771..3249553 + 260 73670049 - Mbar_A2573 - hypothetical protein 2490 33.33 -1 3250160..3250588 + 142 73670050 - Mbar_A2574 - helicase 2491 39.76 0 3250739..3251158 + 139 73670051 - Mbar_A2575 - MarR family transcriptional regulator 2492 46.41 0 3251244..3253652 + 802 73670052 - Mbar_A2576 - ATP-dependent protease La 2493 40.49 0 3254455..3254943 + 162 73670053 - Mbar_A2577 - thioredoxin 2494 40.12 0 3255324..3257003 - 559 73670054 - Mbar_A2578 - 2-octaprenylphenol hydroxylase 2495 42.78 0 3257197..3258096 - 299 73670055 - Mbar_A2579 - hypothetical protein 2496 41.41 0 3258763..3259431 + 222 73670056 - Mbar_A2580 - iron-sulfur flavoprotein 2497 44.86 0 3259601..3260815 - 404 73670057 - Mbar_A2581 - membrane transport protein 2498 43.73 0 3261199..3261996 + 265 73670058 - Mbar_A2582 - hypothetical protein 2499 44.66 0 3262156..3262782 + 208 73670059 - Mbar_A2583 - hypothetical protein 2500 40.62 0 3263043..3264482 - 479 73670060 - Mbar_A2584 - surface antigen gene 2501 30.84 -2 3264650..3265210 - 186 73670061 - Mbar_A2585 - hypothetical protein 2502 43.66 0 3266569..3266994 + 141 73670062 - Mbar_A2586 - universal stress protein 2503 37.50 0 3267076..3267291 - 71 73670063 - Mbar_A2587 - hypothetical protein 2504 48.94 +1 3267535..3268995 - 486 73670064 - Mbar_A2588 - formylmethanofuran dehydrogenase, subunit F 2505 49.05 +1 3268995..3271373 - 792 73670065 - Mbar_A2589 - CoB--CoM heterodisulfide reductase subunit A 2506 37.77 0 3274333..3275640 + 435 73670066 - Mbar_A2591 - transposase 2507 32.59 -1 3276062..3276466 + 134 73670067 - Mbar_A2592 - transposase 2508 38.94 0 3277218..3278447 + 409 73670068 - Mbar_A2593 - hypothetical protein 2509 38.50 0 3278659..3280632 + 657 73670069 - Mbar_A2594 - hypothetical protein 2510 37.82 0 3281893..3282360 + 155 73670070 - Mbar_A2595 - transposase 2511 47.44 +1 3282741..3283385 + 214 73670071 - Mbar_A2596 - hypothetical protein 2512 40.38 0 3283973..3287689 + 1238 73670072 - Mbar_A2597 - hypothetical protein 2513 39.00 0 3287892..3288350 + 152 73670073 - Mbar_A2598 - hypothetical protein 2514 45.80 0 3288489..3289916 + 475 73670074 - Mbar_A2599 - putrescine-ornithine antiporter 2515 39.85 0 3290043..3290579 + 178 73670075 - Mbar_A2600 - hypothetical protein 2516 42.38 0 3290886..3291692 + 268 73670076 - Mbar_A2601 - hypothetical protein 2517 35.53 -1 3294551..3295051 + 166 73670077 - Mbar_A2602 - hypothetical protein 2518 35.26 -1 3295056..3296354 + 432 73670078 - Mbar_A2603 - hypothetical protein 2519 35.42 -1 3296434..3299217 - 927 73670079 - Mbar_A2604 - TPR repeat-containing protein 2520 47.84 +1 3299758..3300915 + 385 73670080 - Mbar_A2605 - aspartate aminotransferase 2521 46.46 0 3301110..3301688 - 192 73670081 - Mbar_A2606 - hypothetical protein 2522 51.53 +2 3303132..3304538 + 468 73670082 - Mbar_A2608 - hypothetical protein 2523 47.57 +1 3304981..3306174 - 397 73670083 - Mbar_A2609 - mRNA 3-end processing factor 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0