version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2375 41.67 0 3099258..3099605 + 115 73669935 - Mbar_A2454 - hypothetical protein 2376 41.26 0 3100209..3100700 + 163 73669936 - Mbar_A2455 - ech hydrogenase subunit C 2377 48.28 +1 3102170..3103801 + 543 73669937 - Mbar_A2456 - secreted metalloprotease 2378 39.55 0 3104544..3104720 + 58 73669938 - Mbar_A2457 - ferredoxin 2379 38.40 0 3106484..3106720 - 78 73669939 - Mbar_A2459 - dihydropteroate synthase 2380 45.04 0 3107457..3108302 - 281 73669940 - Mbar_A2460 - hypothetical protein 2381 45.61 0 3108742..3109938 + 398 73669941 - Mbar_A2461 - hypothetical protein 2382 39.46 0 3110723..3111832 + 369 73669942 - Mbar_A2462 - hypothetical protein 2383 37.23 0 3112040..3112450 + 136 73669943 - Mbar_A2463 - hypothetical protein 2384 36.94 -1 3112371..3112814 + 147 73669944 - Mbar_A2464 - hypothetical protein 2385 42.86 0 3113469..3114077 + 202 73669945 - Mbar_A2465 - nitroreductase 2386 42.18 0 3115158..3115304 - 48 73669946 - Mbar_A2468 - hypothetical protein 2387 49.24 +1 3115470..3116324 - 284 73669947 - Mbar_A2469 - hypothetical protein 2388 40.53 0 3116985..3117470 - 161 73669948 - Mbar_A2470 - hypothetical protein 2389 39.88 0 3117540..3118196 - 218 73669949 - Mbar_A2471 - hypothetical protein 2390 45.57 0 3118680..3118916 - 78 73669950 - Mbar_A2472 - hypothetical protein 2391 43.49 0 3119249..3120124 + 291 73669951 - Mbar_A2473 - hypothetical protein 2392 44.52 0 3121270..3122154 + 294 73669952 - Mbar_A2474 - hypothetical protein 2393 44.05 0 3122151..3125351 + 1066 73669953 - Mbar_A2475 - hypothetical protein 2394 42.82 0 3125317..3126855 + 512 73669954 - Mbar_A2476 - hypothetical protein 2395 41.54 0 3126836..3128248 + 470 73669955 - Mbar_A2477 - hypothetical protein 2396 45.60 0 3128933..3130261 + 442 73669956 - Mbar_A2478 - hypothetical protein 2397 44.00 0 3130975..3131808 + 277 73669957 - Mbar_A2479 - hypothetical protein 2398 44.77 0 3132058..3133368 - 436 73669958 - Mbar_A2480 - hemolysin 2399 42.04 0 3133754..3134557 - 267 73669959 - Mbar_A2481 - hypothetical protein 2400 38.60 0 3135430..3135771 - 113 73669960 - Mbar_A2482 - hypothetical protein 2401 35.44 -1 3135991..3136512 - 173 73669961 - Mbar_A2483 - hypothetical protein 2402 42.01 0 3136794..3137531 - 245 73669962 - Mbar_A2484 - hypothetical protein 2403 42.97 0 3137786..3138553 - 255 73669963 - Mbar_A2485 - hypothetical protein 2404 42.74 0 3138540..3139496 - 318 73669964 - Mbar_A2486 - ATP-binding protein 2405 41.49 0 3139677..3139958 - 93 73669965 - Mbar_A2487 - hypothetical protein 2406 40.74 0 3139955..3140143 - 62 73669966 - Mbar_A2488 - hypothetical protein 2407 38.97 0 3140733..3141122 - 129 73669967 - Mbar_A2489 - hypothetical protein 2408 45.58 0 3141667..3143577 + 636 73669968 - Mbar_A2490 - hydantoinase 2409 45.87 0 3143976..3146081 + 701 73669969 - Mbar_A2491 - hydantoinase 2410 44.14 0 3146390..3146935 + 181 73669970 - Mbar_A2492 - pyruvoyl-dependent arginine decarboxylase 2411 37.57 0 3147171..3149390 - 739 73669971 - Mbar_A2493 - hypothetical protein 2412 35.21 -1 3149485..3150069 - 194 73669972 - Mbar_A2494 - hypothetical protein 2413 33.33 -1 3150398..3151291 - 297 73669973 - Mbar_A2495 - hypothetical protein 2414 37.37 0 3151269..3152210 - 313 73669974 - Mbar_A2496 - glycosyltransferase 2415 36.06 -1 3153386..3155146 + 586 73669975 - Mbar_A2497 - hypothetical protein 2416 32.21 -1 3155339..3155962 + 207 73669976 - Mbar_A2498 - hypothetical protein 2417 50.17 +1 3156228..3156827 + 199 73669977 - Mbar_A2499 - 50S ribosomal protein L15e 2418 47.75 +1 3156824..3157267 + 147 73669978 - Mbar_A2500 - hypothetical protein 2419 47.08 +1 3157260..3157979 + 239 73669979 - Mbar_A2501 - ribonuclease P protein component 3 2420 43.63 0 3157976..3158383 + 135 73669980 - Mbar_A2502 - putative ribonuclease P subunit P14 2421 47.73 +1 3159446..3160195 + 249 73669981 - Mbar_A2503 - proteasome subunit alpha 2422 46.32 0 3160274..3160966 + 230 73669982 - Mbar_A2504 - putative RNA-associated protein 2423 42.53 0 3160978..3161760 + 260 73669983 - Mbar_A2505 - exosome complex RNA-binding protein Rrp4 2424 45.22 0 3161834..3163339 + 501 73669984 - Mbar_A2506 - exosome complex exonuclease 1 2425 46.49 0 3163332..3164114 + 260 73669985 - Mbar_A2507 - exosome complex RNA-binding protein Rrp42 2426 49.12 +1 3164297..3164581 + 94 73669986 rpl37ae Mbar_A2508 - 50S ribosomal protein L37Ae 2427 43.48 0 3164602..3164739 + 45 73669987 - Mbar_A2509 - DNA-directed RNA polymerase subunit P 2428 41.98 0 3165281..3165754 - 157 73669988 - Mbar_A2510 - transcriptional regulator 2429 35.18 -1 3166635..3167825 + 396 73669989 - Mbar_A2511 - transposase 2430 45.57 0 3168531..3169241 - 236 73669990 - Mbar_A2512 - 3-oxoacyl-(acyl-carrier protein) reductase 2431 33.24 -1 3170339..3171421 + 360 73669991 - Mbar_A2513 - hypothetical protein 2432 44.44 0 3171612..3171872 - 86 73669992 - Mbar_A2514 - hypothetical protein 2433 46.00 0 3171980..3172816 - 278 73669993 - Mbar_A2515 - ABC transporter, permease protein 2434 45.76 0 3172820..3173632 - 270 73669994 - Mbar_A2516 - multidrug ABC transporter, ATP-binding protein 2435 43.57 0 3174185..3176509 + 774 73669995 - Mbar_A2517 - glycogen debranching enzyme 2436 43.86 0 3176615..3178315 - 566 73669996 - Mbar_A2518 - sulfate transporter 2437 39.39 0 3179247..3179609 + 120 73669997 - Mbar_A2519 - hypothetical protein 2438 32.53 -1 3180010..3180507 + 165 73669998 - Mbar_A2520 - putative acetyltransferase 2439 34.22 -1 3180725..3181174 + 149 73669999 - Mbar_A2521 - hypothetical protein 2440 40.25 0 3181268..3182482 - 404 73670000 - Mbar_A2522 - hypothetical protein 2441 37.02 0 3182635..3185022 - 795 73670001 - Mbar_A2523 - hypothetical protein 2442 43.87 0 3185115..3185522 + 135 73670002 - Mbar_A2524 - hypothetical protein 2443 30.03 -2 3185541..3185873 - 110 73670003 - Mbar_A2525 - hypothetical protein 2444 39.56 0 3186022..3188220 - 732 73670004 - Mbar_A2526 - hypothetical protein 2445 40.00 0 3188551..3188655 - 34 73670005 - Mbar_A2527 - hypothetical protein 2446 36.90 -1 3188930..3189517 - 195 73670006 - Mbar_A2528 - hypothetical protein 2447 47.44 +1 3190138..3191151 + 337 73670007 - Mbar_A2529 - hypothetical protein 2448 39.58 0 3191869..3192204 + 111 73670008 - Mbar_A2530 - hypothetical protein 2449 42.74 0 3192820..3193776 + 318 73670009 - Mbar_A2531 - hypothetical protein 2450 32.28 -1 3193870..3194058 - 62 73670010 - Mbar_A2532 - hypothetical protein 2451 38.00 0 3194897..3195196 - 99 73670011 - Mbar_A2533 - hypothetical protein 2452 38.27 0 3195397..3195801 - 134 73670012 - Mbar_A2534 - hypothetical protein 2453 50.00 +1 3197608..3197829 + 73 73670013 - Mbar_A2535 - DNA-directed RNA polymerase I, II, and III, 7.3 kDa polypeptide 2454 50.72 +1 3198225..3198431 + 68 73670014 - Mbar_A2536 - DNA-directed RNA polymerase I, II, and III, 7.3 kDa polypeptide 2455 46.74 +1 3199003..3199293 + 96 73670015 - Mbar_A2537 - translation initiation factor IF-1A 2456 46.57 +1 3199867..3200070 + 67 73670016 - Mbar_A2538 - hypothetical protein 2457 42.39 0 3200747..3200989 + 80 73670017 - Mbar_A2539 - hypothetical protein 2458 43.39 0 3201290..3201637 + 115 73670018 - Mbar_A2540 - translation initiation factor IF-1A 2459 45.93 0 3202315..3203949 - 544 73670019 - Mbar_A2541 - acetolactate synthase 2460 43.74 0 3204249..3205613 - 454 73670020 - Mbar_A2542 - aldehyde dehydrogenase 2461 43.12 0 3205903..3206280 + 125 73670021 - Mbar_A2543 - acidic integral membrane protein 2462 45.28 0 3206809..3212475 - 1888 73670022 - Mbar_A2544 - hypothetical protein 2463 41.21 0 3212817..3213743 - 308 73670023 - Mbar_A2545 - integral membrane protein 2464 41.63 0 3214453..3215235 - 260 73670024 - Mbar_A2546 - sec-independent protein translocase, protein 2465 44.57 0 3216096..3216878 + 260 73670025 - Mbar_A2547 - sec-independent protein translocase, protein 2466 45.04 0 3217008..3217400 + 130 73670026 - Mbar_A2548 - sec-independent protein translocase, protein 2467 44.44 0 3217675..3217980 + 101 73670027 - Mbar_A2549 - Sec-independent protein translocase TatA 2468 40.36 0 3218044..3218655 + 203 73670028 - Mbar_A2550 - hypothetical protein 2469 45.26 0 3218843..3219907 - 354 73670029 - Mbar_A2551 - pyruvate formate-lyase activating enzyme-like protein 2470 40.98 0 3220514..3222973 - 819 73670030 - Mbar_A2552 - sensory transduction histidine kinase 2471 42.20 0 3223271..3224545 - 424 73670031 - Mbar_A2553 - methyltransferase 2472 36.03 -1 3225153..3225449 - 98 73670032 - Mbar_A2554 - hypothetical protein 2473 31.08 -2 3225875..3226939 + 354 73670033 - Mbar_A2555 - transposase, putative 2474 35.47 -1 3227276..3227509 + 77 73670034 - Mbar_A2556 - hypothetical protein 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0