version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2045 39.09 0 2665469..2666563 + 364 73669605 - Mbar_A2109 - hypothetical protein 2046 29.22 -2 2666995..2667432 + 145 73669606 - Mbar_A2110 - hypothetical protein 2047 46.73 +1 2667813..2669171 + 452 73669607 - Mbar_A2111 - hypothetical protein 2048 38.82 0 2669255..2669509 + 84 73669608 - Mbar_A2112 - hypothetical protein 2049 45.36 0 2669760..2671937 - 725 73669609 - Mbar_A2113 - cell surface protein 2050 36.59 -1 2672423..2672698 + 91 73669610 - Mbar_A2114 - hypothetical protein 2051 46.05 0 2672740..2673195 + 151 73669611 - Mbar_A2115 - hypothetical protein 2052 43.01 0 2673314..2673685 + 123 73669612 - Mbar_A2116 - hypothetical protein 2053 45.76 0 2673678..2674337 + 219 73669613 - Mbar_A2117 - hypothetical protein 2054 33.45 -1 2674489..2675322 - 277 73669614 - Mbar_A2118 - hypothetical protein 2055 39.67 0 2675731..2676030 + 99 73669615 - Mbar_A2119 - hypothetical protein 2056 46.34 0 2676343..2676588 + 81 73669616 - Mbar_A2120 - hypothetical protein 2057 34.16 -1 2676685..2676927 - 80 73669617 - Mbar_A2121 - hypothetical protein 2058 40.18 0 2676928..2677146 - 72 73669618 - Mbar_A2122 - hypothetical protein 2059 33.83 -1 2677655..2678461 + 268 73669619 - Mbar_A2123 - hypothetical protein 2060 35.12 -1 2678534..2678869 - 111 73669620 - Mbar_A2124 - hypothetical protein 2061 48.04 +1 2679348..2680190 + 280 73669621 - Mbar_A2125 - metallo-beta-lactamase superfamily protein 2062 50.36 +1 2680822..2682330 + 502 73669622 - Mbar_A2126 - seryl-tRNA synthetase 2063 47.44 +1 2682948..2683571 + 207 73669623 - Mbar_A2127 - 30S ribosomal protein S3Ae 2064 46.11 0 2683737..2686304 - 855 73669624 - Mbar_A2128 - DNA topoisomerase, type I 2065 48.72 +1 2686866..2688152 + 428 73669625 - Mbar_A2129 - thiamine biosynthesis protein ThiC 2066 42.08 0 2689047..2689778 + 243 73669626 - Mbar_A2130 - hypothetical protein 2067 47.10 +1 2690617..2691531 - 304 73669627 - Mbar_A2131 - hypothetical protein 2068 43.20 0 2691712..2692248 + 178 73669628 - Mbar_A2132 - diamine acetyltransferase 2069 39.90 0 2692433..2692843 - 136 73669629 - Mbar_A2133 - hypothetical protein 2070 43.44 0 2694215..2697577 + 1120 73669630 - Mbar_A2136 - cell surface protein 2071 30.90 -2 2698877..2699617 + 246 73669631 - Mbar_A2137 - hypothetical protein 2072 32.95 -1 2699614..2700903 + 429 73669632 - Mbar_A2138 - amylovoran biosynthesis AmsK 2073 32.30 -1 2701180..2702628 - 482 73669633 - Mbar_A2139 - polysaccharide biosynthesis protein 2074 39.08 0 2702695..2703756 - 353 73669634 - Mbar_A2140 - UDP-N-acetylglucosamine 2-epimerase 2075 33.01 -1 2703849..2705099 - 416 73669635 - Mbar_A2141 - glycosyltransferase 2076 44.50 0 2707371..2707925 - 184 73669636 - Mbar_A2142 - corrinoid protein 2077 41.00 0 2707980..2709896 - 638 73669637 - Mbar_A2143 - cell surface protein 2078 42.55 0 2710362..2714876 - 1504 73669638 - Mbar_A2144 - hydrogenobyrinic acid a,c-diamide cobaltochelatase 2079 41.53 0 2715760..2716467 + 235 73669639 - Mbar_A2145 - cobalt transport protein CbiM 2080 40.48 0 2716464..2716799 + 111 73669640 - Mbar_A2146 - cobalt transport protein CbiN 2081 44.09 0 2718106..2719248 + 380 73669641 - Mbar_A2147 - cation efflux system protein 2082 42.66 0 2719370..2720152 + 260 73669642 - Mbar_A2148 - cobalt transport protein 2083 44.20 0 2720164..2721525 + 453 73669643 - Mbar_A2149 - cobalt ABC transporter, ATP-binding protein 2084 40.00 0 2722236..2722415 - 59 73669644 - Mbar_A2150 - hypothetical protein 2085 37.62 0 2723469..2723888 + 139 73669645 - Mbar_A2151 - hypothetical protein 2086 47.46 +1 2726177..2726452 + 91 73669646 - Mbar_A2152 - carbon-monoxide dehydrogenase, subunit delta 2087 36.31 -1 2727658..2728026 + 122 73669647 - Mbar_A2153 - hypothetical protein 2088 44.00 0 2728920..2729144 - 74 73669648 - Mbar_A2154 - hypothetical protein 2089 45.59 0 2730170..2731189 - 339 73669649 - Mbar_A2155 - hypothetical protein 2090 40.56 0 2731541..2731720 - 59 73669650 - Mbar_A2156 - hypothetical protein 2091 48.91 +1 2732076..2732441 - 121 73669651 - Mbar_A2157 - hypothetical protein 2092 43.79 0 2732495..2733814 + 439 73669652 - Mbar_A2158 - cobyrinate a,c-diamide synthase / hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) 2093 41.99 0 2733874..2734104 - 76 73669653 - Mbar_A2159 - hypothetical protein 2094 43.33 0 2735421..2735600 + 59 73669654 - Mbar_A2160 - translation initiation factor IF-1A 2095 44.27 0 2735931..2736122 + 63 73669655 - Mbar_A2161 - hypothetical protein 2096 36.48 -1 2737573..2737890 + 105 73669656 - Mbar_A2163 - transposase 2097 42.61 0 2738107..2739108 - 333 73669657 - Mbar_A2164 - GTP-binding protein 2098 41.89 0 2739467..2740342 + 291 73669658 - Mbar_A2165 - hypothetical protein 2099 40.95 0 2740524..2740838 - 104 73669659 - Mbar_A2166 - phosphoribosyl-ATP pyrophosphatase 2100 46.99 +1 2740926..2742221 - 431 73669660 - Mbar_A2167 - 3-isopropylmalate dehydratase, large subunit 2101 44.49 0 2742373..2743179 - 268 73669661 - Mbar_A2168 - hypothetical protein 2102 44.64 0 2743336..2743839 + 167 73669662 - Mbar_A2169 - hypothetical protein 2103 41.83 0 2743988..2745565 - 525 73669663 - Mbar_A2170 - hypothetical protein 2104 41.08 0 2746246..2746800 + 184 73669664 - Mbar_A2171 - transcriptional regulator 2105 44.52 0 2747231..2748910 + 559 73669665 - Mbar_A2172 - AMP-binding protein 2106 46.18 0 2749526..2749774 + 82 73669666 - Mbar_A2173 - ketoisovalerate ferredoxin oxidoreductase, delta subunit 2107 46.40 0 2749795..2750850 + 351 73669667 - Mbar_A2174 - 2-ketoisovalerate ferredoxin reductase 2108 47.99 +1 2750853..2752298 + 481 73669668 - Mbar_A2175 - ketoisovalerate ferredoxin oxidoreductase, gamma subunit 2109 41.33 0 2753923..2754222 + 99 73669669 - Mbar_A2176 - hypothetical protein 2110 43.14 0 2754230..2755402 - 390 73669670 - Mbar_A2177 - ornithine decarboxylase 2111 42.24 0 2755929..2757197 - 422 73669671 - Mbar_A2178 - amino acid transporter 2112 45.85 0 2757512..2758693 - 393 73669672 - Mbar_A2179 - flavodoxin 2113 46.75 +1 2759153..2760673 + 506 73669673 - Mbar_A2180 - L-glutamine synthetase 2114 44.30 0 2761168..2762088 + 306 73669674 - Mbar_A2181 - hypothetical protein 2115 45.18 0 2762179..2762541 + 120 73669675 - Mbar_A2182 - hypothetical protein 2116 45.33 0 2763348..2766290 + 980 73669676 - Mbar_A2183 - hypothetical protein 2117 37.57 0 2767040..2769070 + 676 73669677 - Mbar_A2184 - hypothetical protein 2118 43.69 0 2769471..2769866 + 131 73669678 - Mbar_A2185 - hypothetical protein 2119 40.74 0 2770080..2770241 - 53 73669679 - Mbar_A2186 - hypothetical protein 2120 42.52 0 2770618..2771499 + 293 73669680 - Mbar_A2187 - hypothetical protein 2121 44.97 0 2771774..2771962 + 62 73669681 - Mbar_A2188 - hypothetical protein 2122 45.82 0 2772516..2773532 + 338 73669682 - Mbar_A2189 - glyceraldehyde-3-phosphate dehydrogenase 2123 45.23 0 2773763..2774569 + 268 73669683 - Mbar_A2190 - bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase 2124 45.65 0 2774571..2775398 + 275 73669684 - Mbar_A2191 - inorganic polyphosphate/ATP-NAD kinase 2125 46.80 +1 2775975..2777192 + 405 73669685 aksA Mbar_A2192 - trans-homoaconitate synthase 2126 41.83 0 2777281..2778186 - 301 73669686 - Mbar_A2193 - hypothetical protein 2127 44.28 0 2778297..2780726 - 809 73669687 - Mbar_A2194 - hypothetical protein 2128 43.33 0 2781120..2783570 - 816 73669688 - Mbar_A2195 - hypothetical protein 2129 43.91 0 2783883..2786312 - 809 73669689 - Mbar_A2196 - hypothetical protein 2130 40.37 0 2788228..2790471 + 747 73669690 - Mbar_A2198 - hypothetical protein 2131 28.00 -2 2791659..2791808 - 49 73669691 - Mbar_A2199 - hypothetical protein 2132 37.35 0 2792243..2792491 + 82 73669692 - Mbar_A2200 - hypothetical protein 2133 38.69 0 2792488..2792823 + 111 73669693 - Mbar_A2201 - hypothetical protein 2134 27.96 -2 2793079..2793264 - 61 73669694 - Mbar_A2202 - transposase 2135 42.25 0 2794912..2795898 + 328 73669695 - Mbar_A2204 - putative magnesium chelatase 2136 39.73 0 2796003..2796878 + 291 73669696 - Mbar_A2205 - hypothetical protein 2137 38.26 0 2796880..2797833 + 317 73669697 - Mbar_A2206 - BatA 2138 39.05 0 2797830..2799404 + 524 73669698 - Mbar_A2207 - hypothetical protein 2139 37.84 0 2801727..2803034 + 435 73669699 - Mbar_A2208 - transposase 2140 33.97 -1 2802984..2804231 - 415 73669700 - Mbar_A2209 - DNA methylase (modification methylase) (methyltransferase) 2141 29.71 -2 2804744..2807254 - 836 73669701 - Mbar_A2210 - type II restriction enzyme, methylase subunit 2142 34.15 -1 2807311..2807799 - 162 73669702 - Mbar_A2211 - hypothetical protein 2143 29.55 -2 2808173..2808463 - 96 73669703 - Mbar_A2212 - hypothetical protein 2144 48.75 +1 2808994..2810433 + 479 73669704 - Mbar_A2213 - heme biosynthesis protein (NirJ-2) 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0