version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1952 33.70 -1 2540906..2541175 - 89 73669512 - Mbar_A2013 - hypothetical protein 1953 46.45 0 2541701..2543065 - 454 73669513 - Mbar_A2014 - tRNA CCA-pyrophosphorylase 1954 30.68 -2 2543267..2543605 - 112 73669514 - Mbar_A2015 - hypothetical protein 1955 44.69 0 2543732..2546338 + 868 73669515 - Mbar_A2016 - hypothetical protein 1956 42.98 0 2546800..2547255 + 151 73669516 - Mbar_A2017 - hypothetical protein 1957 38.39 0 2547825..2548358 + 177 73669517 - Mbar_A2018 - hypothetical protein 1958 37.47 0 2549364..2550860 - 498 73669518 - Mbar_A2019 - hypothetical protein 1959 44.05 0 2552095..2553288 - 397 73669519 - Mbar_A2020 - glucose-1-phosphate thymidylyltransferase 1960 48.28 +1 2553285..2554589 - 434 73669520 - Mbar_A2021 - phosphoglucomutase 1961 45.09 0 2554668..2556521 - 617 73669521 - Mbar_A2022 - glutamine--fructose-6-phosphate transaminase 1962 41.54 0 2556540..2557757 - 405 73669522 - Mbar_A2023 - glucose-1-phosphate thymidylyltransferase 1963 44.77 0 2558540..2558845 + 101 73669523 - Mbar_A2024 - hypothetical protein 1964 40.48 0 2558959..2559909 + 316 73669524 - Mbar_A2025 - hypothetical protein 1965 44.85 0 2560408..2561709 + 433 73669525 - Mbar_A2026 - replication factor A 1966 45.96 0 2561710..2562279 + 189 73669526 - Mbar_A2027 - hypothetical protein 1967 38.26 0 2562582..2563292 - 236 73669527 - Mbar_A2028 - ABC transporter, ATP-binding protein 1968 41.85 0 2563280..2564347 - 355 73669528 - Mbar_A2029 - ABC transporter, ATP-binding protein 1969 41.53 0 2564344..2565246 - 300 73669529 - Mbar_A2030 - ABC transporter, permease protein 1970 42.99 0 2565239..2566180 - 313 73669530 - Mbar_A2031 - ABC transporter, permease protein 1971 42.98 0 2566416..2567990 - 524 73669531 - Mbar_A2032 - ABC transporter, periplasmic binding protein 1972 42.35 0 2568620..2569528 + 302 73669532 - Mbar_A2033 - methyltransferase 1973 45.05 0 2570750..2570971 + 73 73669533 - Mbar_A2034 - hypothetical protein 1974 42.60 0 2571169..2571729 - 186 73669534 - Mbar_A2035 - hypothetical protein 1975 44.74 0 2572158..2572946 - 262 73669535 - Mbar_A2036 - hypothetical protein 1976 41.19 0 2572946..2573467 - 173 73669536 - Mbar_A2037 - ArsR family transcriptional regulator 1977 45.66 0 2573528..2574565 - 345 73669537 - Mbar_A2038 - putative deoxyhypusine synthase 1978 42.57 0 2574867..2575364 - 165 73669538 - Mbar_A2039 - pyruvoyl-dependent arginine decarboxylase 1979 45.01 0 2575848..2576498 + 216 73669539 - Mbar_A2040 - hypothetical protein 1980 48.67 +1 2577387..2578886 + 499 73669540 - Mbar_A2041 - hypothetical protein 1981 50.80 +1 2579156..2579905 + 249 73669541 - Mbar_A2042 - glycerol uptake facilitator, MIP channel 1982 34.86 -1 2580293..2581405 + 370 73669542 - Mbar_A2043 - transposase 1983 43.52 0 2581859..2582722 + 287 73669543 - Mbar_A2044 - putative amidohydrolase 1984 36.53 -1 2583285..2584160 + 291 73669544 - Mbar_A2045 - hypothetical protein 1985 35.71 -1 2584161..2585507 + 448 73669545 - Mbar_A2046 - hypothetical protein 1986 34.93 -1 2585904..2586845 - 313 73669546 - Mbar_A2047 - hypothetical protein 1987 47.16 +1 2587242..2590142 - 966 73669547 leuS Mbar_A2048 - leucyl-tRNA synthetase 1988 46.63 +1 2590508..2591725 - 405 73669548 - Mbar_A2049 - threonine synthase 1989 34.72 -1 2592235..2592594 - 119 73669549 - Mbar_A2050 - hypothetical protein 1990 36.34 -1 2592796..2593128 - 110 73669550 - Mbar_A2051 - hypothetical protein 1991 42.74 0 2593578..2594513 - 311 73669551 - Mbar_A2052 - hypothetical protein 1992 47.54 +1 2595028..2597898 - 956 73669552 - Mbar_A2053 - membrane alanine aminopeptidase 1993 35.86 -1 2598769..2599797 + 342 73669553 - Mbar_A2054 - hypothetical protein 1994 43.56 0 2600017..2600544 - 175 73669554 - Mbar_A2055 - hypothetical protein 1995 43.33 0 2601175..2601414 + 79 73669555 - Mbar_A2056 - hypothetical protein 1996 41.92 0 2601860..2602150 + 96 73669556 - Mbar_A2057 - hypothetical protein 1997 42.58 0 2602412..2603233 + 273 73669557 - Mbar_A2058 - hypothetical protein 1998 39.86 0 2603412..2603702 + 96 73669558 - Mbar_A2059 - hypothetical protein 1999 44.51 0 2604014..2604550 + 178 73669559 - Mbar_A2060 - formaldehyde-activating enzyme 2000 37.07 0 2606565..2607314 + 249 73669560 - Mbar_A2063 - hypothetical protein 2001 37.38 0 2607346..2608086 + 246 73669561 - Mbar_A2064 - hypothetical protein 2002 28.21 -2 2608779..2609207 + 142 73669562 - Mbar_A2065 - hypothetical protein 2003 42.40 0 2610653..2611060 + 135 73669563 - Mbar_A2067 - hypothetical protein 2004 39.97 0 2611507..2612304 + 265 73669564 - Mbar_A2068 - hypothetical protein 2005 47.71 +1 2613069..2614730 - 553 73669565 - Mbar_A2069 - dihydroxy-acid dehydratase 2006 40.90 0 2616141..2617925 + 594 73669566 - Mbar_A2070 - sensory transduction histidine kinase 2007 43.95 0 2618138..2618608 + 156 73669567 - Mbar_A2071 - flavodoxin 2008 46.20 0 2619024..2619956 - 310 73669568 - Mbar_A2072 - tetrahydromethanopterin S-methyltransferase subunit H 2009 43.43 0 2620071..2620664 - 197 73669569 - Mbar_A2073 - tetrahydromethanopterin S-methyltransferase subunit A 2010 47.90 +1 2620661..2621518 - 285 73669570 - Mbar_A2074 - N5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase subunit X 2011 45.62 0 2622097..2624025 + 642 73669571 - Mbar_A2075 - replication factor C large subunit 2012 33.97 -1 2626604..2626918 + 104 73669572 - Mbar_A2076 - hypothetical protein 2013 42.86 0 2627191..2627841 + 216 73669573 - Mbar_A2077 - BRAMP 2014 46.07 0 2627920..2630211 + 763 73669574 - Mbar_A2078 - cell division cycle protein 2015 43.85 0 2630573..2631133 + 186 73669575 - Mbar_A2079 - XRE family transcriptional regulator 2016 46.27 0 2631590..2632741 + 383 73669576 - Mbar_A2080 - phosphoserine aminotransferase / L-aspartate aminotransferase 2017 44.95 0 2632843..2633307 + 154 73669577 - Mbar_A2081 - riboflavin synthase 2018 48.64 +1 2633346..2633750 + 134 73669578 ribH Mbar_A2082 - riboflavin synthase subunit beta 2019 44.97 0 2633797..2634939 + 380 73669579 - Mbar_A2083 - aspartate aminotransferase 2020 44.29 0 2635029..2635448 - 139 73669580 - Mbar_A2084 - glycerol-3-phosphate cytidyltransferase 2021 45.84 0 2635811..2637313 + 500 73669581 - Mbar_A2085 - hypothetical protein 2022 42.12 0 2637316..2637702 + 128 73669582 - Mbar_A2086 - ferredoxin 2023 45.85 0 2638168..2638974 + 268 73669583 - Mbar_A2087 - thymidylate synthase 2024 35.91 -1 2639313..2639777 - 154 73669584 - Mbar_A2088 - hypothetical protein 2025 40.77 0 2640600..2640962 + 120 73669585 - Mbar_A2089 - hypothetical protein 2026 39.07 0 2641044..2641949 - 301 73669586 - Mbar_A2090 - hypothetical protein 2027 41.90 0 2642346..2643653 + 435 73669587 - Mbar_A2091 - hypothetical protein 2028 43.17 0 2643974..2644705 + 243 73669588 - Mbar_A2092 - Ala-tRNA(Pro) hydrolase 2029 38.76 0 2644851..2645882 - 343 73669589 - Mbar_A2093 - sodium/calcium exchanger protein 2030 39.68 0 2647021..2647209 + 62 73669590 - Mbar_A2094 - hypothetical protein 2031 40.21 0 2647228..2647416 + 62 73669591 - Mbar_A2095 - hypothetical protein 2032 50.26 +1 2648196..2648390 + 64 73669592 - Mbar_A2096 - hypothetical protein 2033 40.96 0 2648648..2649001 - 117 73669593 - Mbar_A2097 - hypothetical protein 2034 45.63 0 2649046..2649606 - 186 73669594 - Mbar_A2098 - hypothetical protein 2035 40.88 0 2650028..2650345 - 105 73669595 - Mbar_A2099 - hypothetical protein 2036 49.43 +1 2650514..2651296 + 260 73669596 - Mbar_A2100 - ribulose-1,5-biphosphate synthetase 2037 48.03 +1 2651733..2653460 + 575 73669597 - Mbar_A2101 - hypothetical protein 2038 39.44 0 2653761..2653973 + 70 73669598 - Mbar_A2102 - hypothetical protein 2039 41.83 0 2654030..2656558 - 842 73669599 - Mbar_A2103 - magnesium transport P-type atpase 2040 40.97 0 2656592..2657665 - 357 73669600 - Mbar_A2104 - hypothetical protein 2041 43.32 0 2658669..2661821 + 1050 73669601 - Mbar_A2105 - hypothetical protein 2042 42.09 0 2661906..2662670 + 254 73669602 - Mbar_A2106 - hypothetical protein 2043 44.24 0 2662726..2663550 + 274 73669603 - Mbar_A2107 - hypothetical protein 2044 46.43 0 2663547..2664668 + 373 73669604 - Mbar_A2108 - hypothetical protein 2045 39.09 0 2665469..2666563 + 364 73669605 - Mbar_A2109 - hypothetical protein 2046 29.22 -2 2666995..2667432 + 145 73669606 - Mbar_A2110 - hypothetical protein 2047 46.73 +1 2667813..2669171 + 452 73669607 - Mbar_A2111 - hypothetical protein 2048 38.82 0 2669255..2669509 + 84 73669608 - Mbar_A2112 - hypothetical protein 2049 45.36 0 2669760..2671937 - 725 73669609 - Mbar_A2113 - cell surface protein 2050 36.59 -1 2672423..2672698 + 91 73669610 - Mbar_A2114 - hypothetical protein 2051 46.05 0 2672740..2673195 + 151 73669611 - Mbar_A2115 - hypothetical protein 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.