version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1751 42.59 0 2256777..2256884 + 35 73669311 - Mbar_A1805 - type I site-specific deoxyribonuclease 1752 42.92 0 2257544..2258002 + 152 73669312 - Mbar_A1806 - small heat shock protein 1753 46.96 +1 2258486..2259094 - 202 73669313 - Mbar_A1807 - hypothetical protein 1754 44.39 0 2259572..2260810 - 412 73669314 pgk Mbar_A1808 - phosphoglycerate kinase 1755 44.32 0 2261111..2261656 + 181 73669315 - Mbar_A1809 - DNA polymerase 1756 42.09 0 2262158..2262454 + 98 73669316 - Mbar_A1810 - hypothetical protein 1757 44.62 0 2262668..2262862 + 64 73669317 - Mbar_A1811 - ferredoxin 1758 37.38 0 2262959..2264686 - 575 73669318 - Mbar_A1812 - hypothetical protein 1759 41.26 0 2265056..2265976 - 306 73669319 - Mbar_A1813 - hypothetical protein 1760 40.26 0 2266007..2266396 - 129 73669320 - Mbar_A1814 - hypothetical protein 1761 38.83 0 2266923..2268776 - 617 73669321 - Mbar_A1815 - hypothetical protein 1762 38.01 0 2269205..2270722 - 505 73669322 - Mbar_A1816 - hypothetical protein 1763 45.28 0 2270807..2272288 - 493 73669323 - Mbar_A1817 - phycocyanin alpha phycocyanobilin lyase 1764 42.40 0 2272288..2273136 - 282 73669324 - Mbar_A1818 - hypothetical protein 1765 45.65 0 2273133..2273741 - 202 73669325 - Mbar_A1819 - hypothetical protein 1766 46.05 0 2274639..2275865 - 408 73669326 - Mbar_A1820 - acetate kinase 1767 44.51 0 2275987..2276988 - 333 73669327 - Mbar_A1821 - phosphotransacetylase 1768 40.72 0 2277234..2277815 + 193 73669328 - Mbar_A1822 - iron-sulfur flavoprotein 1769 46.97 +1 2278110..2279891 + 593 73669329 - Mbar_A1823 - putative chloride channel 1770 43.18 0 2280017..2283691 + 1224 73669330 - Mbar_A1824 - hypothetical protein 1771 33.90 -1 2284097..2284804 - 235 73669331 - Mbar_A1825 - hypothetical protein 1772 37.69 0 2285098..2288382 + 1094 73669332 - Mbar_A1826 - hypothetical protein 1773 44.54 0 2288394..2288759 - 121 73669333 - Mbar_A1827 - hypothetical protein 1774 29.56 -2 2288942..2289259 + 105 73669334 - Mbar_A1828 - hypothetical protein 1775 43.22 0 2289524..2290039 - 171 73669335 - Mbar_A1829 - hypothetical protein 1776 42.34 0 2290510..2291442 - 310 73669336 - Mbar_A1830 - hypothetical protein 1777 44.06 0 2291439..2292296 - 285 73669337 - Mbar_A1831 - hypothetical protein 1778 41.69 0 2292398..2293630 - 410 73669338 - Mbar_A1832 - cation efflux system protein 1779 47.35 +1 2293774..2294151 - 125 73669339 - Mbar_A1833 - hypothetical protein 1780 46.53 +1 2294484..2294930 - 148 73669340 - Mbar_A1834 - hypothetical protein 1781 47.33 +1 2295514..2296842 - 442 73669341 - Mbar_A1835 - 2-methylthioadenine synthase 1782 49.00 +1 2297305..2298402 - 365 73669342 glpX Mbar_A1836 - fructose 1,6-bisphosphatase II 1783 42.49 0 2298827..2299558 + 243 73669343 - Mbar_A1837 - glutamine amidotransferase (class I) 1784 44.00 0 2299807..2300331 - 174 73669344 - Mbar_A1838 - hypothetical protein 1785 39.52 0 2300882..2301673 - 263 73669345 - Mbar_A1839 - methanophenazine-reducing hydrogenase, cytochrome B subunit 1786 46.06 0 2301688..2303478 - 596 73669346 - Mbar_A1840 - methanophenazine-reducing hydrogenase, large subunit 1787 43.85 0 2303478..2304713 - 411 73669347 - Mbar_A1841 - methanophenazine-reducing hydrogenase, small subunit 1788 46.15 0 2305065..2305985 + 306 73669348 - Mbar_A1842 - hypothetical protein 1789 45.06 0 2306210..2306533 - 107 73669349 - Mbar_A1843 - hypothetical protein 1790 45.47 0 2306989..2307474 - 161 73669350 - Mbar_A1844 - hydrogenase expression/formation protein 1791 44.44 0 2307574..2308347 - 257 73669351 - Mbar_A1845 - methanophenazine-reducing hydrogenase, cytochrome B subunit 1792 46.62 +1 2308372..2310147 - 591 73669352 - Mbar_A1846 - methanophenazine-reducing hydrogenase, large subunit 1793 47.37 +1 2310155..2311315 - 386 73669353 - Mbar_A1847 - methanophenazine-reducing hydrogenase, small subunit 1794 42.15 0 2312727..2312987 + 86 73669354 - Mbar_A1848 - hydrogenase expression/formation protein 1795 45.49 0 2313008..2314126 + 372 73669355 - Mbar_A1849 - hydrogenase expression/formation protein 1796 43.03 0 2314119..2314520 + 133 73669356 hypA Mbar_A1850 - hydrogenase nickel incorporation protein 1797 41.11 0 2314567..2315235 + 222 73669357 - Mbar_A1851 - hydrogenase expression/formation protein 1798 47.61 +1 2315465..2316508 + 347 73669358 - Mbar_A1852 - hydrogenase expression/formation protein 1799 35.34 -1 2316979..2317326 + 115 73669359 - Mbar_A1853 - hypothetical protein 1800 38.83 0 2317644..2318171 + 175 73669360 - Mbar_A1854 - hypothetical protein 1801 39.05 0 2318443..2318862 + 139 73669361 - Mbar_A1855 - hypothetical protein 1802 40.68 0 2319344..2320132 + 262 73669362 - Mbar_A1856 - hypothetical protein 1803 38.74 0 2321619..2322413 + 264 73669363 - Mbar_A1858 - putative ABC transport system permease protein 1804 42.49 0 2322504..2322896 - 130 73669364 - Mbar_A1859 - thioredoxin 1805 43.04 0 2323320..2323700 - 126 73669365 - Mbar_A1860 - hypothetical protein 1806 44.67 0 2324435..2325184 + 249 73669366 - Mbar_A1861 - hypothetical protein 1807 46.55 +1 2325626..2326858 + 410 73669367 - Mbar_A1862 - S-adenosylmethionine synthetase 1808 42.64 0 2326881..2327750 - 289 73669368 ubiA Mbar_A1863 - prenyltransferase 1809 40.18 0 2328604..2330574 + 656 73669369 - Mbar_A1864 - hypothetical protein 1810 45.14 0 2330689..2331603 - 304 73669370 - Mbar_A1865 - quinolinate synthetase 1811 46.45 0 2332305..2333120 - 271 73669371 - Mbar_A1866 - L-aspartate dehydrogenase 1812 43.84 0 2333317..2334144 + 275 73669372 - Mbar_A1867 - nicotinate-nucleotide pyrophosphorylase [carboxylating] 1813 43.86 0 2334805..2336010 + 401 73669373 - Mbar_A1868 - iron(III) dicitrate-binding protein 1814 44.36 0 2336509..2337714 + 401 73669374 - Mbar_A1869 - iron(III) dicitrate-binding protein 1815 44.55 0 2338156..2339367 + 403 73669375 - Mbar_A1870 - iron(III) dicitrate-binding protein 1816 47.06 +1 2339386..2340456 + 356 73669376 - Mbar_A1871 - iron(III) dicitrate transport system permease protein 1817 44.96 0 2340453..2341235 + 260 73669377 - Mbar_A1872 - iron(III) dicitrate transport ATP-binding protein 1818 44.66 0 2341417..2341875 - 152 73669378 rps15p Mbar_A1873 - 30S ribosomal protein S15P 1819 43.01 0 2342246..2343547 - 433 73669379 - Mbar_A1874 - hypothetical protein 1820 46.98 +1 2343760..2344389 - 209 73669380 - Mbar_A1875 - hypothetical protein 1821 45.24 0 2344364..2345077 - 237 73669381 - Mbar_A1876 - hypothetical protein 1822 44.88 0 2345116..2345652 - 178 73669382 - Mbar_A1877 - hypothetical protein 1823 43.06 0 2346169..2347824 + 551 73669383 - Mbar_A1878 - ubiquinone biosynthesis protein 1824 41.53 0 2347984..2348715 - 243 73669384 - Mbar_A1879 - hypothetical protein 1825 43.99 0 2349279..2350019 + 246 73669385 - Mbar_A1880 - hypothetical protein 1826 38.33 0 2350126..2350365 + 79 73669386 - Mbar_A1881 - hypothetical protein 1827 42.51 0 2350721..2350927 + 68 73669387 - Mbar_A1882 - mercury ion binding protein 1828 40.69 0 2351076..2351306 + 76 73669388 - Mbar_A1883 - heavy-metal-associated protein 1829 40.21 0 2351645..2352022 - 125 73669389 - Mbar_A1884 - hypothetical protein 1830 38.56 0 2352146..2352910 + 254 73669390 - Mbar_A1885 - CODH nickel-insertion accessory protein 1831 37.36 0 2353073..2353717 + 214 73669391 - Mbar_A1886 - FMN-binding protein 1832 35.53 -1 2353708..2354253 + 181 73669392 - Mbar_A1887 - dTDP-4-dehydrorhamnose 3,5-epimerase 1833 43.00 0 2354827..2355033 + 68 73669393 - Mbar_A1888 - mercury ion binding protein 1834 44.57 0 2355632..2358496 + 954 73669394 - Mbar_A1889 - P-type copper-transporting ATPase 1835 41.76 0 2358613..2358873 + 86 73669395 - Mbar_A1890 - hypothetical protein 1836 40.07 0 2359108..2359656 - 182 73669396 - Mbar_A1891 - rubrerythrin 1837 40.33 0 2359814..2360113 - 99 73669397 - Mbar_A1892 - putative small heat shock protein 1838 37.31 0 2360719..2361045 + 108 73669398 - Mbar_A1893 - hypothetical protein 1839 41.95 0 2361086..2361352 - 88 73669399 - Mbar_A1894 - hypothetical protein 1840 39.36 0 2361864..2362892 - 342 73669400 - Mbar_A1895 - hypothetical protein 1841 42.20 0 2363157..2364149 + 330 73669401 - Mbar_A1896 - hypothetical protein 1842 43.85 0 2364542..2365045 + 167 73669402 - Mbar_A1897 - hypothetical protein 1843 45.98 0 2365072..2366067 + 331 73669403 - Mbar_A1898 - homoserine dehydrogenase 1844 46.40 0 2366157..2367863 + 568 73669404 - Mbar_A1899 - DNA ligase (ATP) 1845 35.25 -1 2369018..2369383 + 121 73669405 - Mbar_A1900 - hypothetical protein 1846 35.61 -1 2369664..2370059 - 131 73669406 - Mbar_A1901 - hypothetical protein 1847 30.99 -2 2370281..2370877 - 198 73669407 - Mbar_A1902 - hypothetical protein 1848 35.01 -1 2371110..2372363 - 417 73669408 - Mbar_A1903 - transposase 1849 33.63 -1 2372823..2373161 - 112 73669409 - Mbar_A1904 - hypothetical protein 1850 37.44 0 2373218..2374117 - 299 73669410 - Mbar_A1905 - hypothetical protein 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0