version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1554 44.27 0 1973774..1974898 + 374 73669114 - Mbar_A1603 - geranylgeranyl reductase 1555 43.88 0 1975038..1976213 + 391 73669115 - Mbar_A1604 - geranylgeranyl reductase 1556 46.67 +1 1977078..1978217 + 379 73669116 - Mbar_A1605 - hypothetical protein 1557 46.46 0 1978204..1979247 + 347 73669117 - Mbar_A1606 - putative triphosphoribosyl-dephospho-CoA synthase 1558 44.91 0 1979244..1979891 + 215 73669118 - Mbar_A1607 - hypothetical protein 1559 34.72 -1 1979973..1980551 - 192 73669119 - Mbar_A1608 - hypothetical protein 1560 34.16 -1 1980564..1981286 - 240 73669120 - Mbar_A1609 - hypothetical protein 1561 47.64 +1 1981983..1982702 + 239 73669121 - Mbar_A1610 - flavoprotein 1562 45.35 0 1982892..1983590 - 232 73669122 - Mbar_A1611 - oligopeptide ABC transporter, ATP-binding protein 1563 44.54 0 1983572..1984615 - 347 73669123 - Mbar_A1612 - oligopeptide ABC transporter, ATP-binding protein 1564 42.50 0 1984612..1985571 - 319 73669124 - Mbar_A1613 - oligopeptide ABC transporter, permease protein 1565 44.59 0 1985558..1986472 - 304 73669125 - Mbar_A1614 - oligopeptide ABC transporter, permease protein 1566 43.93 0 1986731..1988494 - 587 73669126 - Mbar_A1615 - oligopeptide ABC transporter, solute-binding protein 1567 41.59 0 1988858..1989862 - 334 73669127 - Mbar_A1616 - hypothetical protein 1568 37.54 0 1990520..1991089 + 189 73669128 - Mbar_A1618 - hypothetical protein 1569 44.82 0 1991245..1992132 - 295 73669129 - Mbar_A1619 - hypothetical protein 1570 44.84 0 1992468..1993832 + 454 73669130 - Mbar_A1620 - aldehyde dehydrogenase 1571 39.42 0 1993898..1994275 + 125 73669131 - Mbar_A1621 - hypothetical protein 1572 32.85 -1 1995587..1996210 - 207 73669132 - Mbar_A1622 - hypothetical protein 1573 28.01 -2 1997097..1998092 + 331 73669133 - Mbar_A1623 - hypothetical protein 1574 44.49 0 1998243..1999577 + 444 73669134 - Mbar_A1624 - hypothetical protein 1575 43.32 0 1999567..2001918 + 783 73669135 - Mbar_A1625 - hypothetical protein 1576 41.09 0 2002090..2004024 - 644 73669136 - Mbar_A1626 - hypothetical protein 1577 39.12 0 2005431..2007278 - 615 73669137 - Mbar_A1627 - hypothetical protein 1578 47.10 +1 2009643..2010194 - 183 73669138 - Mbar_A1628 - phenylacrylic acid decarboxylase 1579 44.72 0 2010375..2010734 - 119 73669139 - Mbar_A1629 - hypothetical protein 1580 43.92 0 2010906..2012105 - 399 73669140 - Mbar_A1630 - hypothetical protein 1581 45.05 0 2012216..2013145 + 309 73669141 - Mbar_A1631 - LPPG:FO 2-phospho-L-lactate transferase 1582 42.16 0 2013518..2014639 + 373 73669142 - Mbar_A1632 - hypothetical protein 1583 41.88 0 2015011..2015583 + 190 73669143 - Mbar_A1633 - adenine phosphoribosyltransferase 1584 47.02 +1 2015564..2016571 + 335 73669144 - Mbar_A1634 - diphthamide synthase subunit 1585 41.75 0 2016756..2017349 + 197 73669145 - Mbar_A1635 - methyltransferase 1586 45.35 0 2017680..2018636 + 318 73669146 - Mbar_A1636 - putative RNA-binding protein 1587 39.78 0 2018715..2018993 + 92 73669147 - Mbar_A1637 - DNA-directed RNA polymerase, subunit L 1588 47.11 +1 2019491..2020651 + 386 73669148 - Mbar_A1638 - Sep-tRNA:Cys-tRNA synthetase 1589 40.41 0 2021006..2021344 - 112 73669149 - Mbar_A1639 - hypothetical protein 1590 36.89 -1 2022489..2022854 + 121 73669150 - Mbar_A1640 - hypothetical protein 1591 43.86 0 2023061..2024323 - 420 73669151 - Mbar_A1641 - diaminopimelate decarboxylase 1592 43.48 0 2024847..2026601 - 584 73669152 - Mbar_A1642 - bifunctional DNA polymerase X family protein/ histidinol phosphatase 1593 43.15 0 2026807..2028456 - 549 73669153 - Mbar_A1643 - DNA ligase (ATP) 1594 35.42 -1 2028460..2028555 - 31 73669154 - Mbar_A1644 - DNA ligase (ATP) 1595 38.44 0 2029356..2029766 - 136 73669155 - Mbar_A1645 - phenylacetic acid degradation protein 1596 41.27 0 2030236..2031420 + 394 73669156 - Mbar_A1646 - hypothetical protein 1597 46.09 0 2033220..2033462 + 80 73669157 - Mbar_A1648 - hypothetical protein 1598 38.89 0 2034492..2035013 + 173 73669158 - Mbar_A1649 - hypothetical protein 1599 44.87 0 2035722..2036111 + 129 73669159 - Mbar_A1650 - hypothetical protein 1600 40.67 0 2036460..2038475 + 671 73669160 - Mbar_A1651 - glutathione-regulated potassium-efflux system protein 1601 44.44 0 2038605..2039198 + 197 73669161 - Mbar_A1652 - Maf protein 1602 41.24 0 2039435..2040850 + 471 73669162 - Mbar_A1653 - cysteinyl-tRNA synthetase 1603 36.07 -1 2041206..2041424 + 72 73669163 - Mbar_A1654 - hypothetical protein 1604 32.10 -2 2041666..2042070 - 134 73669164 - Mbar_A1655 - transposase 1605 32.08 -2 2042107..2042265 + 52 73669165 - Mbar_A1656 - transposase 1606 35.36 -1 2042283..2043218 + 311 73669166 - Mbar_A1657 - transposase 1607 43.40 0 2043481..2044404 + 307 73669167 - Mbar_A1658 - ATP-dependent protease La 1608 39.16 0 2044577..2045074 - 165 73669168 - Mbar_A1659 - hypothetical protein 1609 53.47 +2 2045260..2046918 - 552 73669169 - Mbar_A1660 - hypothetical protein 1610 54.39 +2 2046932..2048242 - 436 73669170 - Mbar_A1661 - hypothetical protein 1611 50.12 +1 2049308..2050552 + 414 73669171 - Mbar_A1662 - hypothetical protein 1612 54.34 +2 2050767..2052056 - 429 73669172 - Mbar_A1663 - hypothetical protein 1613 45.69 0 2052557..2053414 + 285 73669173 - Mbar_A1664 - putative phosphoesterase 1614 44.85 0 2053961..2054125 + 54 73669174 - Mbar_A1665 - sensory transduction histidine kinase 1615 41.09 0 2054203..2057040 + 945 73669175 - Mbar_A1666 - sensory transduction histidine kinase 1616 41.99 0 2057553..2059100 + 515 73669176 lysS Mbar_A1667 - lysyl-tRNA synthetase 1617 32.54 -1 2061235..2061738 - 167 73669177 - Mbar_A1669 - hypothetical protein 1618 48.15 +1 2062060..2064927 + 955 73669178 - Mbar_A1670 - ATP-dependent RNA helicase 1619 36.13 -1 2066352..2067317 + 321 73669179 - Mbar_A1672 - hypothetical protein 1620 35.85 -1 2067767..2068282 + 171 73669180 - Mbar_A1673 - hypothetical protein 1621 45.17 0 2068234..2069247 - 337 73669181 - Mbar_A1674 - ABC transporter, ATP-binding protein 1622 44.01 0 2069307..2069999 - 230 73669182 - Mbar_A1675 - hypothetical protein 1623 38.93 0 2069996..2071228 - 410 73669183 - Mbar_A1676 - hypothetical protein 1624 40.16 0 2072190..2072702 + 170 73669184 - Mbar_A1677 - hypothetical protein 1625 38.10 0 2072863..2072988 + 41 73669185 - Mbar_A1678 - nucleotidyltransferase 1626 39.95 0 2073028..2073450 - 140 73669186 - Mbar_A1679 - hypothetical protein 1627 36.48 -1 2073895..2074434 + 179 73669187 - Mbar_A1680 - hypothetical protein 1628 34.09 -1 2074627..2075022 - 131 73669188 - Mbar_A1681 - hypothetical protein 1629 36.92 -1 2075130..2075519 - 129 73669189 - Mbar_A1682 - hypothetical protein 1630 46.71 +1 2075755..2076681 - 308 73669190 - Mbar_A1683 - NADPH:quinone reductase 1631 40.21 0 2077510..2080125 + 871 73669191 - Mbar_A1684 - cell surface glycoprotein 1632 41.48 0 2080385..2080924 - 179 73669192 - Mbar_A1685 - phosphinothricin acetyltransferase 1633 41.69 0 2081266..2082342 + 358 73669193 - Mbar_A1686 - hypothetical protein 1634 38.75 0 2083291..2084988 + 565 73669194 - Mbar_A1687 - signal-transducing histidine kinase 1635 46.30 0 2085504..2086529 + 341 73669195 - Mbar_A1688 - methylcobalamin:coenzyme M methyltransferase 1636 43.64 0 2086607..2087314 + 235 73669196 - Mbar_A1689 - hypothetical protein 1637 37.76 0 2087490..2088008 - 172 73669197 - Mbar_A1690 - hypothetical protein 1638 43.49 0 2088491..2088874 + 127 73669198 - Mbar_A1691 - hypothetical protein 1639 41.39 0 2089437..2090330 + 297 73669199 ubiA Mbar_A1692 - prenyltransferase 1640 41.41 0 2090394..2091371 - 325 73669200 - Mbar_A1693 - arginine deiminase 1641 41.72 0 2091404..2092429 - 341 73669201 - Mbar_A1694 - hypothetical protein 1642 44.75 0 2092560..2093435 - 291 73669202 - Mbar_A1695 - tungsten-containing aldehyde ferredoxin oxidoreductase cofactor modifying protein 1643 45.77 0 2093463..2093663 - 66 73669203 - Mbar_A1696 - tungsten-containing aldehyde ferredoxin oxidoreductase cofactor modifying protein 1644 39.83 0 2093974..2094804 + 276 73669204 - Mbar_A1697 - hypothetical protein 1645 39.98 0 2095068..2096045 + 325 73669205 - Mbar_A1698 - transporter 1646 38.98 0 2096143..2097612 - 489 73669206 - Mbar_A1699 - hypothetical protein 1647 43.54 0 2097719..2098051 - 110 73669207 - Mbar_A1700 - hypothetical protein 1648 31.40 -2 2098431..2099000 - 189 73669208 - Mbar_A1701 - GCN5-related N-acetyltransferase 1649 37.41 0 2099197..2100987 - 596 73669209 - Mbar_A1702 - hypothetical protein 1650 36.74 -1 2101064..2101768 - 234 73669210 - Mbar_A1703 - hypothetical protein 1651 39.19 0 2102687..2103745 - 352 73669211 - Mbar_A1704 - heavy metal resistance membrane protein 1652 34.20 -1 2103816..2104163 - 115 73669212 - Mbar_A1705 - ArsR family transcriptional regulator 1653 37.40 0 2104442..2104834 + 130 73669213 - Mbar_A1706 - universal stress protein 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0