version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1482 37.12 0 1882457..1882720 + 87 73669042 - Mbar_A1526 - transposase 1483 37.25 0 1883238..1884131 - 297 73669043 - Mbar_A1527 - surface layer protein B 1484 38.73 0 1884716..1885123 + 135 73669044 - Mbar_A1528 - hypothetical protein 1485 40.55 0 1886456..1887328 + 290 73669045 - Mbar_A1529 - hypothetical protein 1486 39.81 0 1887702..1889786 + 694 73669046 - Mbar_A1530 - glycosyltransferase 1487 37.58 0 1889801..1890577 + 258 73669047 - Mbar_A1531 - hypothetical protein 1488 40.71 0 1890828..1891505 - 225 73669048 - Mbar_A1532 - hypothetical protein 1489 45.26 0 1891593..1892246 - 217 73669049 - Mbar_A1533 - hypothetical protein 1490 37.92 0 1893595..1895643 + 682 73669050 - Mbar_A1535 - sensory transduction histidine kinase 1491 46.45 0 1897320..1898135 + 271 73669051 - Mbar_A1538 - hypothetical protein 1492 45.40 0 1898278..1899735 + 485 73669052 - Mbar_A1539 - hypothetical protein 1493 46.05 0 1900054..1901193 - 379 73669053 - Mbar_A1540 - hypothetical protein 1494 41.91 0 1901362..1901769 - 135 73669054 - Mbar_A1541 - hypothetical protein 1495 41.94 0 1902007..1902285 + 92 73669055 groES Mbar_A1542 - co-chaperonin GroES 1496 45.31 0 1902408..1904018 + 536 73669056 groEL Mbar_A1543 - chaperonin GroEL 1497 41.55 0 1904374..1905201 + 275 73669057 - Mbar_A1544 - hypothetical protein 1498 43.77 0 1905864..1906505 + 213 73669058 - Mbar_A1545 - hypothetical protein 1499 46.62 +1 1906776..1907972 + 398 73669059 - Mbar_A1546 - aspartate aminotransferase 1500 44.84 0 1908225..1908989 - 254 73669060 - Mbar_A1547 - hypothetical protein 1501 38.01 0 1910489..1911022 + 177 73669061 - Mbar_A1549 - antibiotic resistance protein 1502 32.10 -2 1911200..1911442 - 80 73669062 - Mbar_A1550 - hypothetical protein 1503 42.76 0 1911868..1913256 - 462 73669063 - Mbar_A1551 - nitrogenase, subunit K 1504 41.88 0 1913272..1913622 - 116 73669064 - Mbar_A1552 - nitrogenase, subunit delta 1505 42.56 0 1913615..1915207 - 530 73669065 - Mbar_A1553 - nitrogenase, subunit D 1506 40.21 0 1915229..1915606 - 125 73669066 - Mbar_A1554 - nitrogen regulatory protein P-II 1507 39.31 0 1915620..1915937 - 105 73669067 - Mbar_A1555 - P-II family nitrogen regulatory protein 1508 39.38 0 1916699..1917856 - 385 73669068 - Mbar_A1556 - molybdate ABC transporter, ATP-binding protein 1509 45.28 0 1917853..1918530 - 225 73669069 - Mbar_A1557 - molybdate ABC transporter, permease protein 1510 43.17 0 1918553..1919386 - 277 73669070 - Mbar_A1558 - molybdenum ABC transporter, solute-binding protein 1511 39.05 0 1920129..1920338 - 69 73669071 - Mbar_A1559 - molybdenum-pterin binding protein 1512 43.15 0 1920948..1922312 + 454 73669072 - Mbar_A1560 - formylmethanofuran dehydrogenase, subunit B 1513 48.80 +1 1922425..1924512 + 695 73669073 - Mbar_A1561 - formate dehydrogenase, alpha subunit (F420) 1514 46.52 0 1924509..1925714 + 401 73669074 - Mbar_A1562 - formate dehydrogenase, beta subunit (F420) 1515 38.30 0 1926495..1927178 + 227 73669075 - Mbar_A1563 - hypothetical protein 1516 47.31 +1 1927571..1928944 - 457 73669076 - Mbar_A1564 - hypothetical protein 1517 44.88 0 1929049..1929819 - 256 73669077 - Mbar_A1565 - 3-isopropylmalate dehydratase 1518 46.15 0 1929829..1929984 - 51 73669078 - Mbar_A1566 - H/ACA RNA-protein complex component Nop10p 1519 44.61 0 1929991..1930797 - 268 73669079 - Mbar_A1567 - translation initiation factor IF-2 subunit alpha 1520 43.39 0 1930871..1931059 - 62 73669080 rps27e Mbar_A1568 - 30S ribosomal protein S27e 1521 45.88 0 1931066..1931344 - 92 73669081 rpl44e Mbar_A1569 - 50S ribosomal protein L44e 1522 41.91 0 1931905..1932627 - 240 73669082 - Mbar_A1570 - hypothetical protein 1523 43.13 0 1932593..1933837 - 414 73669083 - Mbar_A1571 - DNA primase small subunit 1524 44.78 0 1934917..1935720 + 267 73669084 - Mbar_A1572 - hypothetical protein 1525 39.05 0 1936142..1936456 + 104 73669085 - Mbar_A1573 - hypothetical protein 1526 39.91 0 1936473..1938236 + 587 73669086 - Mbar_A1574 - hypothetical protein 1527 45.70 0 1938410..1940803 + 797 73669087 - Mbar_A1575 - hypothetical protein 1528 47.20 +1 1940800..1941852 + 350 73669088 - Mbar_A1576 - cell division protein pelota 1529 42.06 0 1942949..1945183 + 744 73669089 - Mbar_A1577 - hypothetical protein 1530 43.89 0 1945508..1946227 - 239 73669090 - Mbar_A1578 - hypothetical protein 1531 44.75 0 1946481..1947356 - 291 73669091 - Mbar_A1579 - hypothetical protein 1532 43.04 0 1947777..1948322 + 181 73669092 - Mbar_A1580 - 2'-5' RNA ligase 1533 45.74 0 1948443..1949522 - 359 73669093 - Mbar_A1581 - hypothetical protein 1534 46.47 0 1950165..1951169 + 334 73669094 rfc Mbar_A1582 - replication factor C small subunit 1535 47.17 +1 1951289..1951801 + 170 73669095 - Mbar_A1583 - putative small multi-drug export protein 1536 37.62 0 1951985..1952194 - 69 73669096 - Mbar_A1584 - histone 1537 45.87 0 1952823..1953779 + 318 73669097 - Mbar_A1585 - hypothetical protein 1538 45.18 0 1954402..1956123 + 573 73669098 - Mbar_A1586 - pyruvate carboxylase subunit B 1539 47.64 +1 1956145..1957626 + 493 73669099 - Mbar_A1587 - pyruvate carboxylase subunit A 1540 44.75 0 1957734..1958714 + 326 73669100 - Mbar_A1588 - biotin--(acetyl-COA-carboxylase) synthetase 1541 38.77 0 1958698..1959378 + 226 73669101 - Mbar_A1589 - hypothetical protein 1542 41.04 0 1959862..1960821 - 319 73669102 - Mbar_A1590 - phosphoserine phosphatase 1543 40.54 0 1960853..1961476 - 207 73669103 - Mbar_A1591 - hypothetical protein 1544 41.92 0 1961600..1961890 - 96 73669104 - Mbar_A1592 - hypothetical protein 1545 44.03 0 1962171..1964273 - 700 73669105 - Mbar_A1593 - replicative DNA helicase Mcm 1546 42.90 0 1964434..1965165 - 243 73669106 - Mbar_A1594 - SpoU rRNA methylase 1547 44.53 0 1965869..1966252 + 127 73669107 - Mbar_A1596 - hypothetical protein 1548 45.58 0 1966959..1967636 + 225 73669108 - Mbar_A1597 - sulfite reductase, assimilatory-type 1549 41.15 0 1968353..1969132 + 259 73669109 - Mbar_A1598 - CoB-CoM heterodisulfide reductase, subunit E 1550 48.05 +1 1969137..1970366 + 409 73669110 - Mbar_A1599 - CoB-CoM heterodisulfide reductase, subunit D 1551 41.67 0 1970472..1971107 + 211 73669111 - Mbar_A1600 - hypothetical protein 1552 38.33 0 1971100..1971720 + 206 73669112 - Mbar_A1601 - hypothetical protein 1553 34.45 -1 1972084..1973247 + 387 73669113 - Mbar_A1602 - hypothetical protein 1554 44.27 0 1973774..1974898 + 374 73669114 - Mbar_A1603 - geranylgeranyl reductase 1555 43.88 0 1975038..1976213 + 391 73669115 - Mbar_A1604 - geranylgeranyl reductase 1556 46.67 +1 1977078..1978217 + 379 73669116 - Mbar_A1605 - hypothetical protein 1557 46.46 0 1978204..1979247 + 347 73669117 - Mbar_A1606 - putative triphosphoribosyl-dephospho-CoA synthase 1558 44.91 0 1979244..1979891 + 215 73669118 - Mbar_A1607 - hypothetical protein 1559 34.72 -1 1979973..1980551 - 192 73669119 - Mbar_A1608 - hypothetical protein 1560 34.16 -1 1980564..1981286 - 240 73669120 - Mbar_A1609 - hypothetical protein 1561 47.64 +1 1981983..1982702 + 239 73669121 - Mbar_A1610 - flavoprotein 1562 45.35 0 1982892..1983590 - 232 73669122 - Mbar_A1611 - oligopeptide ABC transporter, ATP-binding protein 1563 44.54 0 1983572..1984615 - 347 73669123 - Mbar_A1612 - oligopeptide ABC transporter, ATP-binding protein 1564 42.50 0 1984612..1985571 - 319 73669124 - Mbar_A1613 - oligopeptide ABC transporter, permease protein 1565 44.59 0 1985558..1986472 - 304 73669125 - Mbar_A1614 - oligopeptide ABC transporter, permease protein 1566 43.93 0 1986731..1988494 - 587 73669126 - Mbar_A1615 - oligopeptide ABC transporter, solute-binding protein 1567 41.59 0 1988858..1989862 - 334 73669127 - Mbar_A1616 - hypothetical protein 1568 37.54 0 1990520..1991089 + 189 73669128 - Mbar_A1618 - hypothetical protein 1569 44.82 0 1991245..1992132 - 295 73669129 - Mbar_A1619 - hypothetical protein 1570 44.84 0 1992468..1993832 + 454 73669130 - Mbar_A1620 - aldehyde dehydrogenase 1571 39.42 0 1993898..1994275 + 125 73669131 - Mbar_A1621 - hypothetical protein 1572 32.85 -1 1995587..1996210 - 207 73669132 - Mbar_A1622 - hypothetical protein 1573 28.01 -2 1997097..1998092 + 331 73669133 - Mbar_A1623 - hypothetical protein 1574 44.49 0 1998243..1999577 + 444 73669134 - Mbar_A1624 - hypothetical protein 1575 43.32 0 1999567..2001918 + 783 73669135 - Mbar_A1625 - hypothetical protein 1576 41.09 0 2002090..2004024 - 644 73669136 - Mbar_A1626 - hypothetical protein 1577 39.12 0 2005431..2007278 - 615 73669137 - Mbar_A1627 - hypothetical protein 1578 47.10 +1 2009643..2010194 - 183 73669138 - Mbar_A1628 - phenylacrylic acid decarboxylase 1579 44.72 0 2010375..2010734 - 119 73669139 - Mbar_A1629 - hypothetical protein 1580 43.92 0 2010906..2012105 - 399 73669140 - Mbar_A1630 - hypothetical protein 1581 45.05 0 2012216..2013145 + 309 73669141 - Mbar_A1631 - LPPG:FO 2-phospho-L-lactate transferase 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0