version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1432 46.21 0 1804159..1805874 + 571 73668992 gltX Mbar_A1470 - glutamyl-tRNA synthetase 1433 40.67 0 1806344..1808401 + 685 73668993 - Mbar_A1471 - cell surface protein 1434 39.35 0 1808933..1810909 + 658 73668994 - Mbar_A1472 - cell surface protein 1435 41.27 0 1811446..1813485 + 679 73668995 - Mbar_A1473 - cell surface protein 1436 39.06 0 1814018..1815763 + 581 73668996 - Mbar_A1474 - cell surface protein 1437 42.72 0 1817252..1818220 + 322 73668997 - Mbar_A1476 - hypothetical protein 1438 40.91 0 1819547..1820602 + 351 73668998 - Mbar_A1477 - hypothetical protein 1439 39.89 0 1821150..1823177 + 675 73668999 - Mbar_A1478 - cell surface protein 1440 39.20 0 1823881..1825890 + 669 73669000 - Mbar_A1479 - cell surface protein 1441 36.55 -1 1827972..1828469 + 165 73669001 - Mbar_A1481 - inorganic pyrophosphatase 1442 41.27 0 1829533..1830351 + 272 73669002 - Mbar_A1482 - hypothetical protein 1443 39.39 0 1831201..1833315 + 704 73669003 - Mbar_A1483 - sensory transduction histidine kinase 1444 38.49 0 1833790..1834914 + 374 73669004 - Mbar_A1484 - hypothetical protein 1445 39.64 0 1834790..1835344 + 184 73669005 - Mbar_A1485 - putative surface layer protein 1446 42.92 0 1835846..1836523 + 225 73669006 - Mbar_A1486 - hypothetical protein 1447 35.12 -1 1836945..1839239 - 764 73669007 - Mbar_A1487 - hypothetical protein 1448 38.62 0 1839565..1839810 + 81 73669008 - Mbar_A1488 - hypothetical protein 1449 36.53 -1 1839839..1840213 + 124 73669009 - Mbar_A1489 - hypothetical protein 1450 28.82 -2 1840374..1842014 + 546 73669010 - Mbar_A1490 - hypothetical protein 1451 42.22 0 1843003..1843767 + 254 73669011 - Mbar_A1491 - hypothetical protein 1452 46.77 +1 1843998..1844585 - 195 73669012 - Mbar_A1492 - cobalt-precorrin-6Y C(5)-methyltransferase 1453 47.75 +1 1844624..1845643 - 339 73669013 cbiD Mbar_A1493 - cobalt-precorrin-6A synthase 1454 44.44 0 1846299..1848377 - 692 73669014 - Mbar_A1494 - DNA mismatch repair protein MutL 1455 44.91 0 1848453..1851155 - 900 73669015 - Mbar_A1495 - DNA mismatch repair protein 1456 34.76 -1 1851875..1852576 - 233 73669016 - Mbar_A1496 - hypothetical protein 1457 38.89 0 1852573..1852896 - 107 73669017 - Mbar_A1497 - PadR family transcriptional regulator 1458 51.12 +1 1854537..1855070 - 177 73669018 - Mbar_A1498 - CDP-diacylglycerol-inositol 3-phosphatidyltransferase 1459 46.13 0 1855678..1856826 + 382 73669019 - Mbar_A1499 - heterodisulfide reductase, subunit D 1460 40.94 0 1857184..1857354 + 56 73669020 - Mbar_A1500 - nitrogenase iron protein 1461 45.77 0 1857822..1858448 + 208 73669021 - Mbar_A1501 - dimethylamine corrinoid protein 1462 46.48 0 1859993..1860646 + 217 73669022 - Mbar_A1503 - dimethylamine corrinoid protein 1463 44.99 0 1861067..1862113 + 348 73669023 - Mbar_A1504 - trimethylamine permease 1464 42.42 0 1862115..1862411 + 98 73669024 - Mbar_A1505 - hypothetical protein 1465 45.79 0 1865051..1866664 + 537 73669025 lysK Mbar_A1507 - lysyl-tRNA synthetase 1466 43.17 0 1866700..1867380 + 226 73669026 - Mbar_A1508 - hypothetical protein 1467 40.70 0 1867595..1867852 - 85 73669027 - Mbar_A1509 - hypothetical protein 1468 45.42 0 1867998..1868477 - 159 73669028 - Mbar_A1510 - deoxynucleoside 5'-monophosphate N-glycosidase 1469 45.13 0 1868521..1871181 - 886 73669029 - Mbar_A1511 - peptidase family protein U32 1470 45.77 0 1871387..1871788 - 133 73669030 - Mbar_A1512 - hypothetical protein 1471 48.72 +1 1872080..1872313 - 77 73669031 - Mbar_A1513 - hypothetical protein 1472 46.59 +1 1872539..1873360 - 273 73669032 - Mbar_A1514 - imidazole glycerol phosphate synthase subunit HisF 1473 43.44 0 1873745..1874209 - 154 73669033 - Mbar_A1515 - hypothetical protein 1474 46.46 0 1874611..1875090 - 159 73669034 - Mbar_A1517 - protein-L-isoaspartate O-methyltransferase 1475 47.01 +1 1875065..1875700 - 211 73669035 - Mbar_A1518 - hypothetical protein 1476 30.52 -2 1876148..1876396 - 82 73669036 - Mbar_A1519 - hypothetical protein 1477 34.39 -1 1876415..1877452 - 345 73669037 - Mbar_A1520 - hypothetical protein 1478 42.47 0 1878565..1878969 + 134 73669038 - Mbar_A1522 - hypothetical protein 1479 43.07 0 1880094..1880771 + 225 73669039 - Mbar_A1523 - hypothetical protein 1480 47.10 +1 1880768..1881508 + 246 73669040 ribB Mbar_A1524 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 1481 37.96 0 1881756..1882382 + 208 73669041 - Mbar_A1525 - transposase 1482 37.12 0 1882457..1882720 + 87 73669042 - Mbar_A1526 - transposase 1483 37.25 0 1883238..1884131 - 297 73669043 - Mbar_A1527 - surface layer protein B 1484 38.73 0 1884716..1885123 + 135 73669044 - Mbar_A1528 - hypothetical protein 1485 40.55 0 1886456..1887328 + 290 73669045 - Mbar_A1529 - hypothetical protein 1486 39.81 0 1887702..1889786 + 694 73669046 - Mbar_A1530 - glycosyltransferase 1487 37.58 0 1889801..1890577 + 258 73669047 - Mbar_A1531 - hypothetical protein 1488 40.71 0 1890828..1891505 - 225 73669048 - Mbar_A1532 - hypothetical protein 1489 45.26 0 1891593..1892246 - 217 73669049 - Mbar_A1533 - hypothetical protein 1490 37.92 0 1893595..1895643 + 682 73669050 - Mbar_A1535 - sensory transduction histidine kinase 1491 46.45 0 1897320..1898135 + 271 73669051 - Mbar_A1538 - hypothetical protein 1492 45.40 0 1898278..1899735 + 485 73669052 - Mbar_A1539 - hypothetical protein 1493 46.05 0 1900054..1901193 - 379 73669053 - Mbar_A1540 - hypothetical protein 1494 41.91 0 1901362..1901769 - 135 73669054 - Mbar_A1541 - hypothetical protein 1495 41.94 0 1902007..1902285 + 92 73669055 groES Mbar_A1542 - co-chaperonin GroES 1496 45.31 0 1902408..1904018 + 536 73669056 groEL Mbar_A1543 - chaperonin GroEL 1497 41.55 0 1904374..1905201 + 275 73669057 - Mbar_A1544 - hypothetical protein 1498 43.77 0 1905864..1906505 + 213 73669058 - Mbar_A1545 - hypothetical protein 1499 46.62 +1 1906776..1907972 + 398 73669059 - Mbar_A1546 - aspartate aminotransferase 1500 44.84 0 1908225..1908989 - 254 73669060 - Mbar_A1547 - hypothetical protein 1501 38.01 0 1910489..1911022 + 177 73669061 - Mbar_A1549 - antibiotic resistance protein 1502 32.10 -2 1911200..1911442 - 80 73669062 - Mbar_A1550 - hypothetical protein 1503 42.76 0 1911868..1913256 - 462 73669063 - Mbar_A1551 - nitrogenase, subunit K 1504 41.88 0 1913272..1913622 - 116 73669064 - Mbar_A1552 - nitrogenase, subunit delta 1505 42.56 0 1913615..1915207 - 530 73669065 - Mbar_A1553 - nitrogenase, subunit D 1506 40.21 0 1915229..1915606 - 125 73669066 - Mbar_A1554 - nitrogen regulatory protein P-II 1507 39.31 0 1915620..1915937 - 105 73669067 - Mbar_A1555 - P-II family nitrogen regulatory protein 1508 39.38 0 1916699..1917856 - 385 73669068 - Mbar_A1556 - molybdate ABC transporter, ATP-binding protein 1509 45.28 0 1917853..1918530 - 225 73669069 - Mbar_A1557 - molybdate ABC transporter, permease protein 1510 43.17 0 1918553..1919386 - 277 73669070 - Mbar_A1558 - molybdenum ABC transporter, solute-binding protein 1511 39.05 0 1920129..1920338 - 69 73669071 - Mbar_A1559 - molybdenum-pterin binding protein 1512 43.15 0 1920948..1922312 + 454 73669072 - Mbar_A1560 - formylmethanofuran dehydrogenase, subunit B 1513 48.80 +1 1922425..1924512 + 695 73669073 - Mbar_A1561 - formate dehydrogenase, alpha subunit (F420) 1514 46.52 0 1924509..1925714 + 401 73669074 - Mbar_A1562 - formate dehydrogenase, beta subunit (F420) 1515 38.30 0 1926495..1927178 + 227 73669075 - Mbar_A1563 - hypothetical protein 1516 47.31 +1 1927571..1928944 - 457 73669076 - Mbar_A1564 - hypothetical protein 1517 44.88 0 1929049..1929819 - 256 73669077 - Mbar_A1565 - 3-isopropylmalate dehydratase 1518 46.15 0 1929829..1929984 - 51 73669078 - Mbar_A1566 - H/ACA RNA-protein complex component Nop10p 1519 44.61 0 1929991..1930797 - 268 73669079 - Mbar_A1567 - translation initiation factor IF-2 subunit alpha 1520 43.39 0 1930871..1931059 - 62 73669080 rps27e Mbar_A1568 - 30S ribosomal protein S27e 1521 45.88 0 1931066..1931344 - 92 73669081 rpl44e Mbar_A1569 - 50S ribosomal protein L44e 1522 41.91 0 1931905..1932627 - 240 73669082 - Mbar_A1570 - hypothetical protein 1523 43.13 0 1932593..1933837 - 414 73669083 - Mbar_A1571 - DNA primase small subunit 1524 44.78 0 1934917..1935720 + 267 73669084 - Mbar_A1572 - hypothetical protein 1525 39.05 0 1936142..1936456 + 104 73669085 - Mbar_A1573 - hypothetical protein 1526 39.91 0 1936473..1938236 + 587 73669086 - Mbar_A1574 - hypothetical protein 1527 45.70 0 1938410..1940803 + 797 73669087 - Mbar_A1575 - hypothetical protein 1528 47.20 +1 1940800..1941852 + 350 73669088 - Mbar_A1576 - cell division protein pelota 1529 42.06 0 1942949..1945183 + 744 73669089 - Mbar_A1577 - hypothetical protein 1530 43.89 0 1945508..1946227 - 239 73669090 - Mbar_A1578 - hypothetical protein 1531 44.75 0 1946481..1947356 - 291 73669091 - Mbar_A1579 - hypothetical protein 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0