version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1414 40.19 0 1784066..1786063 + 665 73668974 - Mbar_A1452 - ferrous iron transport protein B 1415 42.63 0 1786076..1786516 + 146 73668975 - Mbar_A1453 - hypothetical protein 1416 38.10 0 1786576..1786890 + 104 73668976 - Mbar_A1454 - hypothetical protein 1417 36.00 -1 1787269..1787493 - 74 73668977 - Mbar_A1455 - hypothetical protein 1418 32.77 -1 1787661..1788017 - 118 73668978 - Mbar_A1456 - hypothetical protein 1419 37.89 0 1791399..1791881 + 160 73668979 - Mbar_A1457 - hypothetical protein 1420 47.52 +1 1792392..1793441 + 349 73668980 - Mbar_A1458 - heme biosynthesis protein 1421 42.08 0 1793453..1794001 + 182 73668981 - Mbar_A1459 - AsnC family transcriptional regulator 1422 44.44 0 1794007..1794465 + 152 73668982 - Mbar_A1460 - AsnC family transcriptional regulator 1423 45.48 0 1794541..1795215 + 224 73668983 - Mbar_A1461 - precorrin-2 oxidase / ferrochelatase 1424 42.44 0 1795656..1797005 + 449 73668984 hemA Mbar_A1462 - glutamyl-tRNA reductase 1425 45.85 0 1797260..1798234 + 324 73668985 - Mbar_A1463 - delta-aminolevulinic acid dehydratase 1426 47.53 +1 1798765..1800039 + 424 73668986 - Mbar_A1464 - glutamate-1-semialdehyde aminotransferase 1427 49.21 +1 1800088..1801038 + 316 73668987 hemC Mbar_A1465 - porphobilinogen deaminase 1428 49.01 +1 1801127..1802032 + 301 73668988 - Mbar_A1466 - dihydroorotate dehydrogenase 1B 1429 48.46 +1 1802032..1802811 + 259 73668989 - Mbar_A1467 - dihydroorotate dehydrogenase electron transfer subunit 1430 46.26 0 1802885..1803619 + 244 73668990 - Mbar_A1468 - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 1431 45.75 0 1803619..1803924 + 101 73668991 - Mbar_A1469 - hypothetical protein 1432 46.21 0 1804159..1805874 + 571 73668992 gltX Mbar_A1470 - glutamyl-tRNA synthetase 1433 40.67 0 1806344..1808401 + 685 73668993 - Mbar_A1471 - cell surface protein 1434 39.35 0 1808933..1810909 + 658 73668994 - Mbar_A1472 - cell surface protein 1435 41.27 0 1811446..1813485 + 679 73668995 - Mbar_A1473 - cell surface protein 1436 39.06 0 1814018..1815763 + 581 73668996 - Mbar_A1474 - cell surface protein 1437 42.72 0 1817252..1818220 + 322 73668997 - Mbar_A1476 - hypothetical protein 1438 40.91 0 1819547..1820602 + 351 73668998 - Mbar_A1477 - hypothetical protein 1439 39.89 0 1821150..1823177 + 675 73668999 - Mbar_A1478 - cell surface protein 1440 39.20 0 1823881..1825890 + 669 73669000 - Mbar_A1479 - cell surface protein 1441 36.55 -1 1827972..1828469 + 165 73669001 - Mbar_A1481 - inorganic pyrophosphatase 1442 41.27 0 1829533..1830351 + 272 73669002 - Mbar_A1482 - hypothetical protein 1443 39.39 0 1831201..1833315 + 704 73669003 - Mbar_A1483 - sensory transduction histidine kinase 1444 38.49 0 1833790..1834914 + 374 73669004 - Mbar_A1484 - hypothetical protein 1445 39.64 0 1834790..1835344 + 184 73669005 - Mbar_A1485 - putative surface layer protein 1446 42.92 0 1835846..1836523 + 225 73669006 - Mbar_A1486 - hypothetical protein 1447 35.12 -1 1836945..1839239 - 764 73669007 - Mbar_A1487 - hypothetical protein 1448 38.62 0 1839565..1839810 + 81 73669008 - Mbar_A1488 - hypothetical protein 1449 36.53 -1 1839839..1840213 + 124 73669009 - Mbar_A1489 - hypothetical protein 1450 28.82 -2 1840374..1842014 + 546 73669010 - Mbar_A1490 - hypothetical protein 1451 42.22 0 1843003..1843767 + 254 73669011 - Mbar_A1491 - hypothetical protein 1452 46.77 +1 1843998..1844585 - 195 73669012 - Mbar_A1492 - cobalt-precorrin-6Y C(5)-methyltransferase 1453 47.75 +1 1844624..1845643 - 339 73669013 cbiD Mbar_A1493 - cobalt-precorrin-6A synthase 1454 44.44 0 1846299..1848377 - 692 73669014 - Mbar_A1494 - DNA mismatch repair protein MutL 1455 44.91 0 1848453..1851155 - 900 73669015 - Mbar_A1495 - DNA mismatch repair protein 1456 34.76 -1 1851875..1852576 - 233 73669016 - Mbar_A1496 - hypothetical protein 1457 38.89 0 1852573..1852896 - 107 73669017 - Mbar_A1497 - PadR family transcriptional regulator 1458 51.12 +1 1854537..1855070 - 177 73669018 - Mbar_A1498 - CDP-diacylglycerol-inositol 3-phosphatidyltransferase 1459 46.13 0 1855678..1856826 + 382 73669019 - Mbar_A1499 - heterodisulfide reductase, subunit D 1460 40.94 0 1857184..1857354 + 56 73669020 - Mbar_A1500 - nitrogenase iron protein 1461 45.77 0 1857822..1858448 + 208 73669021 - Mbar_A1501 - dimethylamine corrinoid protein 1462 46.48 0 1859993..1860646 + 217 73669022 - Mbar_A1503 - dimethylamine corrinoid protein 1463 44.99 0 1861067..1862113 + 348 73669023 - Mbar_A1504 - trimethylamine permease 1464 42.42 0 1862115..1862411 + 98 73669024 - Mbar_A1505 - hypothetical protein 1465 45.79 0 1865051..1866664 + 537 73669025 lysK Mbar_A1507 - lysyl-tRNA synthetase 1466 43.17 0 1866700..1867380 + 226 73669026 - Mbar_A1508 - hypothetical protein 1467 40.70 0 1867595..1867852 - 85 73669027 - Mbar_A1509 - hypothetical protein 1468 45.42 0 1867998..1868477 - 159 73669028 - Mbar_A1510 - deoxynucleoside 5'-monophosphate N-glycosidase 1469 45.13 0 1868521..1871181 - 886 73669029 - Mbar_A1511 - peptidase family protein U32 1470 45.77 0 1871387..1871788 - 133 73669030 - Mbar_A1512 - hypothetical protein 1471 48.72 +1 1872080..1872313 - 77 73669031 - Mbar_A1513 - hypothetical protein 1472 46.59 +1 1872539..1873360 - 273 73669032 - Mbar_A1514 - imidazole glycerol phosphate synthase subunit HisF 1473 43.44 0 1873745..1874209 - 154 73669033 - Mbar_A1515 - hypothetical protein 1474 46.46 0 1874611..1875090 - 159 73669034 - Mbar_A1517 - protein-L-isoaspartate O-methyltransferase 1475 47.01 +1 1875065..1875700 - 211 73669035 - Mbar_A1518 - hypothetical protein 1476 30.52 -2 1876148..1876396 - 82 73669036 - Mbar_A1519 - hypothetical protein 1477 34.39 -1 1876415..1877452 - 345 73669037 - Mbar_A1520 - hypothetical protein 1478 42.47 0 1878565..1878969 + 134 73669038 - Mbar_A1522 - hypothetical protein 1479 43.07 0 1880094..1880771 + 225 73669039 - Mbar_A1523 - hypothetical protein 1480 47.10 +1 1880768..1881508 + 246 73669040 ribB Mbar_A1524 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 1481 37.96 0 1881756..1882382 + 208 73669041 - Mbar_A1525 - transposase 1482 37.12 0 1882457..1882720 + 87 73669042 - Mbar_A1526 - transposase 1483 37.25 0 1883238..1884131 - 297 73669043 - Mbar_A1527 - surface layer protein B 1484 38.73 0 1884716..1885123 + 135 73669044 - Mbar_A1528 - hypothetical protein 1485 40.55 0 1886456..1887328 + 290 73669045 - Mbar_A1529 - hypothetical protein 1486 39.81 0 1887702..1889786 + 694 73669046 - Mbar_A1530 - glycosyltransferase 1487 37.58 0 1889801..1890577 + 258 73669047 - Mbar_A1531 - hypothetical protein 1488 40.71 0 1890828..1891505 - 225 73669048 - Mbar_A1532 - hypothetical protein 1489 45.26 0 1891593..1892246 - 217 73669049 - Mbar_A1533 - hypothetical protein 1490 37.92 0 1893595..1895643 + 682 73669050 - Mbar_A1535 - sensory transduction histidine kinase 1491 46.45 0 1897320..1898135 + 271 73669051 - Mbar_A1538 - hypothetical protein 1492 45.40 0 1898278..1899735 + 485 73669052 - Mbar_A1539 - hypothetical protein 1493 46.05 0 1900054..1901193 - 379 73669053 - Mbar_A1540 - hypothetical protein 1494 41.91 0 1901362..1901769 - 135 73669054 - Mbar_A1541 - hypothetical protein 1495 41.94 0 1902007..1902285 + 92 73669055 groES Mbar_A1542 - co-chaperonin GroES 1496 45.31 0 1902408..1904018 + 536 73669056 groEL Mbar_A1543 - chaperonin GroEL 1497 41.55 0 1904374..1905201 + 275 73669057 - Mbar_A1544 - hypothetical protein 1498 43.77 0 1905864..1906505 + 213 73669058 - Mbar_A1545 - hypothetical protein 1499 46.62 +1 1906776..1907972 + 398 73669059 - Mbar_A1546 - aspartate aminotransferase 1500 44.84 0 1908225..1908989 - 254 73669060 - Mbar_A1547 - hypothetical protein 1501 38.01 0 1910489..1911022 + 177 73669061 - Mbar_A1549 - antibiotic resistance protein 1502 32.10 -2 1911200..1911442 - 80 73669062 - Mbar_A1550 - hypothetical protein 1503 42.76 0 1911868..1913256 - 462 73669063 - Mbar_A1551 - nitrogenase, subunit K 1504 41.88 0 1913272..1913622 - 116 73669064 - Mbar_A1552 - nitrogenase, subunit delta 1505 42.56 0 1913615..1915207 - 530 73669065 - Mbar_A1553 - nitrogenase, subunit D 1506 40.21 0 1915229..1915606 - 125 73669066 - Mbar_A1554 - nitrogen regulatory protein P-II 1507 39.31 0 1915620..1915937 - 105 73669067 - Mbar_A1555 - P-II family nitrogen regulatory protein 1508 39.38 0 1916699..1917856 - 385 73669068 - Mbar_A1556 - molybdate ABC transporter, ATP-binding protein 1509 45.28 0 1917853..1918530 - 225 73669069 - Mbar_A1557 - molybdate ABC transporter, permease protein 1510 43.17 0 1918553..1919386 - 277 73669070 - Mbar_A1558 - molybdenum ABC transporter, solute-binding protein 1511 39.05 0 1920129..1920338 - 69 73669071 - Mbar_A1559 - molybdenum-pterin binding protein 1512 43.15 0 1920948..1922312 + 454 73669072 - Mbar_A1560 - formylmethanofuran dehydrogenase, subunit B 1513 48.80 +1 1922425..1924512 + 695 73669073 - Mbar_A1561 - formate dehydrogenase, alpha subunit (F420) 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0