version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1375 28.73 -2 1739307..1740218 - 303 73668935 - Mbar_A1411 - hypothetical protein 1376 38.03 0 1740258..1741385 - 375 73668936 - Mbar_A1412 - hypothetical protein 1377 34.90 -1 1741378..1742334 - 318 73668937 - Mbar_A1413 - hypothetical protein 1378 35.97 -1 1742310..1742954 - 214 73668938 - Mbar_A1414 - hypothetical protein 1379 28.28 -2 1742959..1745667 - 902 73668939 - Mbar_A1415 - hypothetical protein 1380 31.36 -2 1745619..1746581 - 320 73668940 - Mbar_A1416 - phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase 1381 45.13 0 1747255..1748220 - 321 73668941 - Mbar_A1417 - dimethylallyltranstransferase / geranyltranstransferase 1382 47.40 +1 1748256..1749599 - 447 73668942 - Mbar_A1418 - metallo-beta-lactamase 1383 49.09 +1 1750942..1752039 - 365 73668943 - Mbar_A1419 - isopentenyl pyrophosphate isomerase 1384 45.21 0 1752043..1752825 - 260 73668944 - Mbar_A1420 - amino acid kinase 1385 43.82 0 1752923..1753828 - 301 73668945 - Mbar_A1421 - mevalonate kinase 1386 44.24 0 1754129..1754926 - 265 73668946 - Mbar_A1422 - hypothetical protein 1387 45.30 0 1754997..1755740 - 247 73668947 rps2P Mbar_A1423 - 30S ribosomal protein S2 1388 44.81 0 1755811..1755993 - 60 73668948 - Mbar_A1424 - DNA-directed RNA polymerase, subunit K 1389 46.03 0 1756182..1756370 - 62 73668949 - Mbar_A1425 - DNA-directed RNA polymerase subunit N 1390 45.19 0 1756375..1756779 - 134 73668950 rps9p Mbar_A1426 - 30S ribosomal protein S9P 1391 45.39 0 1756793..1757215 - 140 73668951 rpl13p Mbar_A1427 - 50S ribosomal protein L13P 1392 46.19 0 1757226..1757645 - 139 73668952 - Mbar_A1428 - 50S ribosomal protein L18e 1393 43.89 0 1758207..1759835 + 542 73668953 - Mbar_A1429 - indolepyruvate decarboxylase 1394 41.07 0 1759972..1760475 - 167 73668954 - Mbar_A1430 - hypothetical protein 1395 45.80 0 1760876..1762447 - 523 73668955 - Mbar_A1431 - D-3-phosphoglycerate dehydrogenase 1396 46.09 0 1762631..1763500 - 289 73668956 - Mbar_A1432 - hypothetical protein 1397 46.53 +1 1763538..1764863 - 441 73668957 - Mbar_A1433 - replication factor A 1398 44.24 0 1765178..1766305 + 375 73668958 - Mbar_A1434 - cell surface protein 1399 41.77 0 1766707..1767714 - 335 73668959 - Mbar_A1435 - hypothetical protein 1400 41.89 0 1770273..1771184 + 303 73668960 - Mbar_A1437 - cobalt-zinc-cadmium resistance protein 1401 49.36 +1 1771190..1772287 + 365 73668961 - Mbar_A1438 - chorismate synthase 1402 30.67 -2 1772711..1773349 - 212 73668962 - Mbar_A1439 - methyltransferase 1403 35.87 -1 1773978..1774253 + 91 73668963 - Mbar_A1440 - hypothetical protein 1404 41.79 0 1774419..1776275 + 618 73668964 - Mbar_A1441 - hypothetical protein 1405 39.85 0 1776457..1776993 + 178 73668965 - Mbar_A1442 - hypothetical protein 1406 28.70 -2 1777264..1777716 + 150 73668966 - Mbar_A1443 - hypothetical protein 1407 33.13 -1 1777722..1778204 + 160 73668967 - Mbar_A1444 - hypothetical protein 1408 39.45 0 1778902..1779408 + 168 73668968 - Mbar_A1445 - hypothetical protein 1409 38.85 0 1779470..1780648 + 392 73668969 - Mbar_A1446 - hypothetical protein 1410 40.04 0 1781627..1782163 + 178 73668970 - Mbar_A1447 - hypothetical protein 1411 29.33 -2 1782395..1782844 + 149 73668971 - Mbar_A1448 - hypothetical protein 1412 45.38 0 1783569..1783817 + 82 73668972 - Mbar_A1450 - ferrous iron transport protein A 1413 44.16 0 1783819..1784049 + 76 73668973 - Mbar_A1451 - hypothetical protein 1414 40.19 0 1784066..1786063 + 665 73668974 - Mbar_A1452 - ferrous iron transport protein B 1415 42.63 0 1786076..1786516 + 146 73668975 - Mbar_A1453 - hypothetical protein 1416 38.10 0 1786576..1786890 + 104 73668976 - Mbar_A1454 - hypothetical protein 1417 36.00 -1 1787269..1787493 - 74 73668977 - Mbar_A1455 - hypothetical protein 1418 32.77 -1 1787661..1788017 - 118 73668978 - Mbar_A1456 - hypothetical protein 1419 37.89 0 1791399..1791881 + 160 73668979 - Mbar_A1457 - hypothetical protein 1420 47.52 +1 1792392..1793441 + 349 73668980 - Mbar_A1458 - heme biosynthesis protein 1421 42.08 0 1793453..1794001 + 182 73668981 - Mbar_A1459 - AsnC family transcriptional regulator 1422 44.44 0 1794007..1794465 + 152 73668982 - Mbar_A1460 - AsnC family transcriptional regulator 1423 45.48 0 1794541..1795215 + 224 73668983 - Mbar_A1461 - precorrin-2 oxidase / ferrochelatase 1424 42.44 0 1795656..1797005 + 449 73668984 hemA Mbar_A1462 - glutamyl-tRNA reductase 1425 45.85 0 1797260..1798234 + 324 73668985 - Mbar_A1463 - delta-aminolevulinic acid dehydratase 1426 47.53 +1 1798765..1800039 + 424 73668986 - Mbar_A1464 - glutamate-1-semialdehyde aminotransferase 1427 49.21 +1 1800088..1801038 + 316 73668987 hemC Mbar_A1465 - porphobilinogen deaminase 1428 49.01 +1 1801127..1802032 + 301 73668988 - Mbar_A1466 - dihydroorotate dehydrogenase 1B 1429 48.46 +1 1802032..1802811 + 259 73668989 - Mbar_A1467 - dihydroorotate dehydrogenase electron transfer subunit 1430 46.26 0 1802885..1803619 + 244 73668990 - Mbar_A1468 - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 1431 45.75 0 1803619..1803924 + 101 73668991 - Mbar_A1469 - hypothetical protein 1432 46.21 0 1804159..1805874 + 571 73668992 gltX Mbar_A1470 - glutamyl-tRNA synthetase 1433 40.67 0 1806344..1808401 + 685 73668993 - Mbar_A1471 - cell surface protein 1434 39.35 0 1808933..1810909 + 658 73668994 - Mbar_A1472 - cell surface protein 1435 41.27 0 1811446..1813485 + 679 73668995 - Mbar_A1473 - cell surface protein 1436 39.06 0 1814018..1815763 + 581 73668996 - Mbar_A1474 - cell surface protein 1437 42.72 0 1817252..1818220 + 322 73668997 - Mbar_A1476 - hypothetical protein 1438 40.91 0 1819547..1820602 + 351 73668998 - Mbar_A1477 - hypothetical protein 1439 39.89 0 1821150..1823177 + 675 73668999 - Mbar_A1478 - cell surface protein 1440 39.20 0 1823881..1825890 + 669 73669000 - Mbar_A1479 - cell surface protein 1441 36.55 -1 1827972..1828469 + 165 73669001 - Mbar_A1481 - inorganic pyrophosphatase 1442 41.27 0 1829533..1830351 + 272 73669002 - Mbar_A1482 - hypothetical protein 1443 39.39 0 1831201..1833315 + 704 73669003 - Mbar_A1483 - sensory transduction histidine kinase 1444 38.49 0 1833790..1834914 + 374 73669004 - Mbar_A1484 - hypothetical protein 1445 39.64 0 1834790..1835344 + 184 73669005 - Mbar_A1485 - putative surface layer protein 1446 42.92 0 1835846..1836523 + 225 73669006 - Mbar_A1486 - hypothetical protein 1447 35.12 -1 1836945..1839239 - 764 73669007 - Mbar_A1487 - hypothetical protein 1448 38.62 0 1839565..1839810 + 81 73669008 - Mbar_A1488 - hypothetical protein 1449 36.53 -1 1839839..1840213 + 124 73669009 - Mbar_A1489 - hypothetical protein 1450 28.82 -2 1840374..1842014 + 546 73669010 - Mbar_A1490 - hypothetical protein 1451 42.22 0 1843003..1843767 + 254 73669011 - Mbar_A1491 - hypothetical protein 1452 46.77 +1 1843998..1844585 - 195 73669012 - Mbar_A1492 - cobalt-precorrin-6Y C(5)-methyltransferase 1453 47.75 +1 1844624..1845643 - 339 73669013 cbiD Mbar_A1493 - cobalt-precorrin-6A synthase 1454 44.44 0 1846299..1848377 - 692 73669014 - Mbar_A1494 - DNA mismatch repair protein MutL 1455 44.91 0 1848453..1851155 - 900 73669015 - Mbar_A1495 - DNA mismatch repair protein 1456 34.76 -1 1851875..1852576 - 233 73669016 - Mbar_A1496 - hypothetical protein 1457 38.89 0 1852573..1852896 - 107 73669017 - Mbar_A1497 - PadR family transcriptional regulator 1458 51.12 +1 1854537..1855070 - 177 73669018 - Mbar_A1498 - CDP-diacylglycerol-inositol 3-phosphatidyltransferase 1459 46.13 0 1855678..1856826 + 382 73669019 - Mbar_A1499 - heterodisulfide reductase, subunit D 1460 40.94 0 1857184..1857354 + 56 73669020 - Mbar_A1500 - nitrogenase iron protein 1461 45.77 0 1857822..1858448 + 208 73669021 - Mbar_A1501 - dimethylamine corrinoid protein 1462 46.48 0 1859993..1860646 + 217 73669022 - Mbar_A1503 - dimethylamine corrinoid protein 1463 44.99 0 1861067..1862113 + 348 73669023 - Mbar_A1504 - trimethylamine permease 1464 42.42 0 1862115..1862411 + 98 73669024 - Mbar_A1505 - hypothetical protein 1465 45.79 0 1865051..1866664 + 537 73669025 lysK Mbar_A1507 - lysyl-tRNA synthetase 1466 43.17 0 1866700..1867380 + 226 73669026 - Mbar_A1508 - hypothetical protein 1467 40.70 0 1867595..1867852 - 85 73669027 - Mbar_A1509 - hypothetical protein 1468 45.42 0 1867998..1868477 - 159 73669028 - Mbar_A1510 - deoxynucleoside 5'-monophosphate N-glycosidase 1469 45.13 0 1868521..1871181 - 886 73669029 - Mbar_A1511 - peptidase family protein U32 1470 45.77 0 1871387..1871788 - 133 73669030 - Mbar_A1512 - hypothetical protein 1471 48.72 +1 1872080..1872313 - 77 73669031 - Mbar_A1513 - hypothetical protein 1472 46.59 +1 1872539..1873360 - 273 73669032 - Mbar_A1514 - imidazole glycerol phosphate synthase subunit HisF 1473 43.44 0 1873745..1874209 - 154 73669033 - Mbar_A1515 - hypothetical protein 1474 46.46 0 1874611..1875090 - 159 73669034 - Mbar_A1517 - protein-L-isoaspartate O-methyltransferase 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0