version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1338 48.28 +1 1694279..1694887 + 202 73668898 - Mbar_A1372 - translation initiation factor IF-2 subunit beta 1339 44.96 0 1695146..1696384 + 412 73668899 - Mbar_A1373 - metallo cofactor biosynthesis protein 1340 46.98 +1 1696691..1698112 + 473 73668900 - Mbar_A1374 - tryptophanyl-tRNA synthetase 1341 48.82 +1 1698283..1699761 + 492 73668901 pheS Mbar_A1375 - phenylalanyl-tRNA synthetase subunit alpha 1342 44.27 0 1700653..1702974 - 773 73668902 - Mbar_A1376 - DNA helicase RepD 1343 46.34 0 1703295..1703663 - 122 73668903 - Mbar_A1377 - MarR family transcriptional regulator 1344 46.77 +1 1703917..1704474 + 185 73668904 - Mbar_A1378 - iron-sulfur flavoprotein 1345 49.14 +1 1704663..1705187 + 174 73668905 - Mbar_A1379 - NADPH-flavin oxidoreductase 1346 38.15 0 1705352..1705600 + 82 73668906 - Mbar_A1380 - hypothetical protein 1347 35.74 -1 1705616..1705906 + 96 73668907 - Mbar_A1381 - hypothetical protein 1348 42.32 0 1706210..1706476 - 88 73668908 - Mbar_A1382 - hypothetical protein 1349 37.63 0 1706488..1707231 - 247 73668909 - Mbar_A1383 - hypothetical protein 1350 37.56 0 1707240..1707665 - 141 73668910 - Mbar_A1384 - hypothetical protein 1351 42.71 0 1708120..1708695 + 191 73668911 - Mbar_A1385 - iron-sulfur flavoprotein 1352 46.38 0 1708778..1709551 - 257 73668912 - Mbar_A1386 - fdhD protein 1353 40.56 0 1711222..1712217 - 331 73668913 - Mbar_A1388 - hypothetical protein 1354 40.22 0 1712259..1713347 - 362 73668914 - Mbar_A1389 - hypothetical protein 1355 41.57 0 1713648..1714181 + 177 73668915 - Mbar_A1390 - hypothetical protein 1356 45.04 0 1714788..1715069 + 93 73668916 - Mbar_A1391 - hypothetical protein 1357 44.41 0 1715483..1716493 - 336 73668917 - Mbar_A1392 - methyltransferase 1358 44.60 0 1716556..1717212 - 218 73668918 - Mbar_A1393 - hypothetical protein 1359 48.13 +1 1717375..1718388 - 337 73668919 tfb Mbar_A1394 - transcription initiation factor IIB 1360 38.70 0 1718580..1718840 - 86 73668920 - Mbar_A1395 - H/ACA RNA-protein complex component Gar1 1361 46.58 +1 1719171..1721819 + 882 73668921 - Mbar_A1396 - pyruvate phosphate dikinase 1362 36.98 0 1723225..1724514 + 429 73668922 - Mbar_A1397 - transposase 1363 32.35 -1 1724474..1724779 - 101 73668923 - Mbar_A1398 - transposase, putative 1364 33.91 -1 1724837..1725532 - 231 73668924 - Mbar_A1399 - transposase, putative 1365 28.90 -2 1727076..1728452 - 458 73668925 - Mbar_A1401 - hypothetical protein 1366 37.68 0 1729282..1730409 - 375 73668926 - Mbar_A1402 - hypothetical protein 1367 35.32 -1 1730402..1731358 - 318 73668927 - Mbar_A1403 - hypothetical protein 1368 34.10 -1 1731334..1731981 - 215 73668928 - Mbar_A1404 - hypothetical protein 1369 28.50 -2 1732268..1733653 - 461 73668929 - Mbar_A1405 - hypothetical protein 1370 32.60 -1 1733637..1734593 - 318 73668930 - Mbar_A1406 - phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase 1371 35.58 -1 1735187..1736431 + 414 73668931 - Mbar_A1407 - transposase 1372 35.90 -1 1736774..1738018 + 414 73668932 - Mbar_A1408 - transposase 1373 33.62 -1 1738262..1738615 + 117 73668933 - Mbar_A1409 - transposase 1374 27.66 -2 1738858..1739298 + 146 73668934 - Mbar_A1410 - transposase 1375 28.73 -2 1739307..1740218 - 303 73668935 - Mbar_A1411 - hypothetical protein 1376 38.03 0 1740258..1741385 - 375 73668936 - Mbar_A1412 - hypothetical protein 1377 34.90 -1 1741378..1742334 - 318 73668937 - Mbar_A1413 - hypothetical protein 1378 35.97 -1 1742310..1742954 - 214 73668938 - Mbar_A1414 - hypothetical protein 1379 28.28 -2 1742959..1745667 - 902 73668939 - Mbar_A1415 - hypothetical protein 1380 31.36 -2 1745619..1746581 - 320 73668940 - Mbar_A1416 - phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase 1381 45.13 0 1747255..1748220 - 321 73668941 - Mbar_A1417 - dimethylallyltranstransferase / geranyltranstransferase 1382 47.40 +1 1748256..1749599 - 447 73668942 - Mbar_A1418 - metallo-beta-lactamase 1383 49.09 +1 1750942..1752039 - 365 73668943 - Mbar_A1419 - isopentenyl pyrophosphate isomerase 1384 45.21 0 1752043..1752825 - 260 73668944 - Mbar_A1420 - amino acid kinase 1385 43.82 0 1752923..1753828 - 301 73668945 - Mbar_A1421 - mevalonate kinase 1386 44.24 0 1754129..1754926 - 265 73668946 - Mbar_A1422 - hypothetical protein 1387 45.30 0 1754997..1755740 - 247 73668947 rps2P Mbar_A1423 - 30S ribosomal protein S2 1388 44.81 0 1755811..1755993 - 60 73668948 - Mbar_A1424 - DNA-directed RNA polymerase, subunit K 1389 46.03 0 1756182..1756370 - 62 73668949 - Mbar_A1425 - DNA-directed RNA polymerase subunit N 1390 45.19 0 1756375..1756779 - 134 73668950 rps9p Mbar_A1426 - 30S ribosomal protein S9P 1391 45.39 0 1756793..1757215 - 140 73668951 rpl13p Mbar_A1427 - 50S ribosomal protein L13P 1392 46.19 0 1757226..1757645 - 139 73668952 - Mbar_A1428 - 50S ribosomal protein L18e 1393 43.89 0 1758207..1759835 + 542 73668953 - Mbar_A1429 - indolepyruvate decarboxylase 1394 41.07 0 1759972..1760475 - 167 73668954 - Mbar_A1430 - hypothetical protein 1395 45.80 0 1760876..1762447 - 523 73668955 - Mbar_A1431 - D-3-phosphoglycerate dehydrogenase 1396 46.09 0 1762631..1763500 - 289 73668956 - Mbar_A1432 - hypothetical protein 1397 46.53 +1 1763538..1764863 - 441 73668957 - Mbar_A1433 - replication factor A 1398 44.24 0 1765178..1766305 + 375 73668958 - Mbar_A1434 - cell surface protein 1399 41.77 0 1766707..1767714 - 335 73668959 - Mbar_A1435 - hypothetical protein 1400 41.89 0 1770273..1771184 + 303 73668960 - Mbar_A1437 - cobalt-zinc-cadmium resistance protein 1401 49.36 +1 1771190..1772287 + 365 73668961 - Mbar_A1438 - chorismate synthase 1402 30.67 -2 1772711..1773349 - 212 73668962 - Mbar_A1439 - methyltransferase 1403 35.87 -1 1773978..1774253 + 91 73668963 - Mbar_A1440 - hypothetical protein 1404 41.79 0 1774419..1776275 + 618 73668964 - Mbar_A1441 - hypothetical protein 1405 39.85 0 1776457..1776993 + 178 73668965 - Mbar_A1442 - hypothetical protein 1406 28.70 -2 1777264..1777716 + 150 73668966 - Mbar_A1443 - hypothetical protein 1407 33.13 -1 1777722..1778204 + 160 73668967 - Mbar_A1444 - hypothetical protein 1408 39.45 0 1778902..1779408 + 168 73668968 - Mbar_A1445 - hypothetical protein 1409 38.85 0 1779470..1780648 + 392 73668969 - Mbar_A1446 - hypothetical protein 1410 40.04 0 1781627..1782163 + 178 73668970 - Mbar_A1447 - hypothetical protein 1411 29.33 -2 1782395..1782844 + 149 73668971 - Mbar_A1448 - hypothetical protein 1412 45.38 0 1783569..1783817 + 82 73668972 - Mbar_A1450 - ferrous iron transport protein A 1413 44.16 0 1783819..1784049 + 76 73668973 - Mbar_A1451 - hypothetical protein 1414 40.19 0 1784066..1786063 + 665 73668974 - Mbar_A1452 - ferrous iron transport protein B 1415 42.63 0 1786076..1786516 + 146 73668975 - Mbar_A1453 - hypothetical protein 1416 38.10 0 1786576..1786890 + 104 73668976 - Mbar_A1454 - hypothetical protein 1417 36.00 -1 1787269..1787493 - 74 73668977 - Mbar_A1455 - hypothetical protein 1418 32.77 -1 1787661..1788017 - 118 73668978 - Mbar_A1456 - hypothetical protein 1419 37.89 0 1791399..1791881 + 160 73668979 - Mbar_A1457 - hypothetical protein 1420 47.52 +1 1792392..1793441 + 349 73668980 - Mbar_A1458 - heme biosynthesis protein 1421 42.08 0 1793453..1794001 + 182 73668981 - Mbar_A1459 - AsnC family transcriptional regulator 1422 44.44 0 1794007..1794465 + 152 73668982 - Mbar_A1460 - AsnC family transcriptional regulator 1423 45.48 0 1794541..1795215 + 224 73668983 - Mbar_A1461 - precorrin-2 oxidase / ferrochelatase 1424 42.44 0 1795656..1797005 + 449 73668984 hemA Mbar_A1462 - glutamyl-tRNA reductase 1425 45.85 0 1797260..1798234 + 324 73668985 - Mbar_A1463 - delta-aminolevulinic acid dehydratase 1426 47.53 +1 1798765..1800039 + 424 73668986 - Mbar_A1464 - glutamate-1-semialdehyde aminotransferase 1427 49.21 +1 1800088..1801038 + 316 73668987 hemC Mbar_A1465 - porphobilinogen deaminase 1428 49.01 +1 1801127..1802032 + 301 73668988 - Mbar_A1466 - dihydroorotate dehydrogenase 1B 1429 48.46 +1 1802032..1802811 + 259 73668989 - Mbar_A1467 - dihydroorotate dehydrogenase electron transfer subunit 1430 46.26 0 1802885..1803619 + 244 73668990 - Mbar_A1468 - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 1431 45.75 0 1803619..1803924 + 101 73668991 - Mbar_A1469 - hypothetical protein 1432 46.21 0 1804159..1805874 + 571 73668992 gltX Mbar_A1470 - glutamyl-tRNA synthetase 1433 40.67 0 1806344..1808401 + 685 73668993 - Mbar_A1471 - cell surface protein 1434 39.35 0 1808933..1810909 + 658 73668994 - Mbar_A1472 - cell surface protein 1435 41.27 0 1811446..1813485 + 679 73668995 - Mbar_A1473 - cell surface protein 1436 39.06 0 1814018..1815763 + 581 73668996 - Mbar_A1474 - cell surface protein 1437 42.72 0 1817252..1818220 + 322 73668997 - Mbar_A1476 - hypothetical protein 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0