version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1304 46.11 0 1648491..1649828 + 445 73668864 - Mbar_A1337 - hypothetical protein 1305 46.83 +1 1650017..1650505 + 162 73668865 leuD Mbar_A1338 - 3-isopropylmalate dehydratase small subunit 1306 47.25 +1 1650601..1651728 + 375 73668866 - Mbar_A1339 - 3-isopropylmalate dehydrogenase 1307 37.25 0 1653694..1654305 - 203 73668867 - Mbar_A1341 - dipeptide ABC transporter, ATP-binding protein 1308 41.13 0 1654295..1655218 - 307 73668868 - Mbar_A1342 - dipeptide ABC transporter, ATP-binding protein 1309 42.42 0 1655681..1656538 - 285 73668869 - Mbar_A1343 - dipeptide ABC transporter, permease protein 1310 41.89 0 1656535..1657527 - 330 73668870 - Mbar_A1344 - dipeptide ABC transporter, permease protein 1311 44.91 0 1657967..1659625 - 552 73668871 - Mbar_A1345 - dipeptide ABC transporter, solute-binding protein 1312 39.32 0 1662066..1662884 - 272 73668872 - Mbar_A1346 - transposase 1313 41.55 0 1663148..1663561 + 137 73668873 - Mbar_A1347 - hypothetical protein 1314 41.93 0 1663707..1664276 + 189 73668874 - Mbar_A1348 - hypothetical protein 1315 32.34 -1 1664561..1664761 + 66 73668875 - Mbar_A1349 - hypothetical protein 1316 42.68 0 1664962..1665528 + 188 73668876 - Mbar_A1350 - hypothetical protein 1317 38.83 0 1665910..1666437 + 175 73668877 - Mbar_A1351 - hypothetical protein 1318 37.48 0 1666575..1667273 + 232 73668878 - Mbar_A1352 - hypothetical protein 1319 34.79 -1 1667328..1668428 + 366 73668879 - Mbar_A1353 - hypothetical protein 1320 33.52 -1 1668609..1669703 + 364 73668880 - Mbar_A1354 - hypothetical protein 1321 33.87 -1 1669693..1672479 + 928 73668881 - Mbar_A1355 - hypothetical protein 1322 37.99 0 1672480..1673445 + 321 73668882 - Mbar_A1356 - hypothetical protein 1323 33.59 -1 1673435..1673827 + 130 73668883 - Mbar_A1357 - hypothetical protein 1324 34.55 -1 1673829..1674653 + 274 73668884 - Mbar_A1358 - hypothetical protein 1325 45.13 0 1675249..1675731 + 160 73668885 - Mbar_A1359 - hypothetical protein 1326 47.70 +1 1675950..1677077 + 375 73668886 - Mbar_A1360 - hypothetical protein 1327 48.63 +1 1677210..1679981 - 923 73668887 alaS Mbar_A1361 - alanyl-tRNA synthetase 1328 42.91 0 1680491..1680751 - 86 73668888 - Mbar_A1362 - hypothetical protein 1329 38.17 0 1681500..1682285 + 261 73668889 - Mbar_A1363 - hypothetical protein 1330 44.12 0 1682603..1683010 - 135 73668890 - Mbar_A1364 - hypothetical protein 1331 46.17 0 1683886..1684407 - 173 73668891 - Mbar_A1365 - cob(I)yrinic acid a,c-diamide adenosyltransferase 1332 38.18 0 1684677..1687154 + 825 73668892 - Mbar_A1366 - hypothetical protein 1333 40.93 0 1687236..1687775 - 179 73668893 - Mbar_A1367 - molybdenum cofactor biosynthesis protein B 1334 44.50 0 1688053..1689234 - 393 73668894 - Mbar_A1368 - hypothetical protein 1335 42.83 0 1689735..1691714 + 659 73668895 - Mbar_A1369 - glycogen debranching enzyme 1336 44.92 0 1692102..1693223 + 373 73668896 - Mbar_A1370 - hypothetical protein 1337 48.85 +1 1693722..1694243 + 173 73668897 rpl10e Mbar_A1371 - 50S ribosomal protein L10e 1338 48.28 +1 1694279..1694887 + 202 73668898 - Mbar_A1372 - translation initiation factor IF-2 subunit beta 1339 44.96 0 1695146..1696384 + 412 73668899 - Mbar_A1373 - metallo cofactor biosynthesis protein 1340 46.98 +1 1696691..1698112 + 473 73668900 - Mbar_A1374 - tryptophanyl-tRNA synthetase 1341 48.82 +1 1698283..1699761 + 492 73668901 pheS Mbar_A1375 - phenylalanyl-tRNA synthetase subunit alpha 1342 44.27 0 1700653..1702974 - 773 73668902 - Mbar_A1376 - DNA helicase RepD 1343 46.34 0 1703295..1703663 - 122 73668903 - Mbar_A1377 - MarR family transcriptional regulator 1344 46.77 +1 1703917..1704474 + 185 73668904 - Mbar_A1378 - iron-sulfur flavoprotein 1345 49.14 +1 1704663..1705187 + 174 73668905 - Mbar_A1379 - NADPH-flavin oxidoreductase 1346 38.15 0 1705352..1705600 + 82 73668906 - Mbar_A1380 - hypothetical protein 1347 35.74 -1 1705616..1705906 + 96 73668907 - Mbar_A1381 - hypothetical protein 1348 42.32 0 1706210..1706476 - 88 73668908 - Mbar_A1382 - hypothetical protein 1349 37.63 0 1706488..1707231 - 247 73668909 - Mbar_A1383 - hypothetical protein 1350 37.56 0 1707240..1707665 - 141 73668910 - Mbar_A1384 - hypothetical protein 1351 42.71 0 1708120..1708695 + 191 73668911 - Mbar_A1385 - iron-sulfur flavoprotein 1352 46.38 0 1708778..1709551 - 257 73668912 - Mbar_A1386 - fdhD protein 1353 40.56 0 1711222..1712217 - 331 73668913 - Mbar_A1388 - hypothetical protein 1354 40.22 0 1712259..1713347 - 362 73668914 - Mbar_A1389 - hypothetical protein 1355 41.57 0 1713648..1714181 + 177 73668915 - Mbar_A1390 - hypothetical protein 1356 45.04 0 1714788..1715069 + 93 73668916 - Mbar_A1391 - hypothetical protein 1357 44.41 0 1715483..1716493 - 336 73668917 - Mbar_A1392 - methyltransferase 1358 44.60 0 1716556..1717212 - 218 73668918 - Mbar_A1393 - hypothetical protein 1359 48.13 +1 1717375..1718388 - 337 73668919 tfb Mbar_A1394 - transcription initiation factor IIB 1360 38.70 0 1718580..1718840 - 86 73668920 - Mbar_A1395 - H/ACA RNA-protein complex component Gar1 1361 46.58 +1 1719171..1721819 + 882 73668921 - Mbar_A1396 - pyruvate phosphate dikinase 1362 36.98 0 1723225..1724514 + 429 73668922 - Mbar_A1397 - transposase 1363 32.35 -1 1724474..1724779 - 101 73668923 - Mbar_A1398 - transposase, putative 1364 33.91 -1 1724837..1725532 - 231 73668924 - Mbar_A1399 - transposase, putative 1365 28.90 -2 1727076..1728452 - 458 73668925 - Mbar_A1401 - hypothetical protein 1366 37.68 0 1729282..1730409 - 375 73668926 - Mbar_A1402 - hypothetical protein 1367 35.32 -1 1730402..1731358 - 318 73668927 - Mbar_A1403 - hypothetical protein 1368 34.10 -1 1731334..1731981 - 215 73668928 - Mbar_A1404 - hypothetical protein 1369 28.50 -2 1732268..1733653 - 461 73668929 - Mbar_A1405 - hypothetical protein 1370 32.60 -1 1733637..1734593 - 318 73668930 - Mbar_A1406 - phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase 1371 35.58 -1 1735187..1736431 + 414 73668931 - Mbar_A1407 - transposase 1372 35.90 -1 1736774..1738018 + 414 73668932 - Mbar_A1408 - transposase 1373 33.62 -1 1738262..1738615 + 117 73668933 - Mbar_A1409 - transposase 1374 27.66 -2 1738858..1739298 + 146 73668934 - Mbar_A1410 - transposase 1375 28.73 -2 1739307..1740218 - 303 73668935 - Mbar_A1411 - hypothetical protein 1376 38.03 0 1740258..1741385 - 375 73668936 - Mbar_A1412 - hypothetical protein 1377 34.90 -1 1741378..1742334 - 318 73668937 - Mbar_A1413 - hypothetical protein 1378 35.97 -1 1742310..1742954 - 214 73668938 - Mbar_A1414 - hypothetical protein 1379 28.28 -2 1742959..1745667 - 902 73668939 - Mbar_A1415 - hypothetical protein 1380 31.36 -2 1745619..1746581 - 320 73668940 - Mbar_A1416 - phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase 1381 45.13 0 1747255..1748220 - 321 73668941 - Mbar_A1417 - dimethylallyltranstransferase / geranyltranstransferase 1382 47.40 +1 1748256..1749599 - 447 73668942 - Mbar_A1418 - metallo-beta-lactamase 1383 49.09 +1 1750942..1752039 - 365 73668943 - Mbar_A1419 - isopentenyl pyrophosphate isomerase 1384 45.21 0 1752043..1752825 - 260 73668944 - Mbar_A1420 - amino acid kinase 1385 43.82 0 1752923..1753828 - 301 73668945 - Mbar_A1421 - mevalonate kinase 1386 44.24 0 1754129..1754926 - 265 73668946 - Mbar_A1422 - hypothetical protein 1387 45.30 0 1754997..1755740 - 247 73668947 rps2P Mbar_A1423 - 30S ribosomal protein S2 1388 44.81 0 1755811..1755993 - 60 73668948 - Mbar_A1424 - DNA-directed RNA polymerase, subunit K 1389 46.03 0 1756182..1756370 - 62 73668949 - Mbar_A1425 - DNA-directed RNA polymerase subunit N 1390 45.19 0 1756375..1756779 - 134 73668950 rps9p Mbar_A1426 - 30S ribosomal protein S9P 1391 45.39 0 1756793..1757215 - 140 73668951 rpl13p Mbar_A1427 - 50S ribosomal protein L13P 1392 46.19 0 1757226..1757645 - 139 73668952 - Mbar_A1428 - 50S ribosomal protein L18e 1393 43.89 0 1758207..1759835 + 542 73668953 - Mbar_A1429 - indolepyruvate decarboxylase 1394 41.07 0 1759972..1760475 - 167 73668954 - Mbar_A1430 - hypothetical protein 1395 45.80 0 1760876..1762447 - 523 73668955 - Mbar_A1431 - D-3-phosphoglycerate dehydrogenase 1396 46.09 0 1762631..1763500 - 289 73668956 - Mbar_A1432 - hypothetical protein 1397 46.53 +1 1763538..1764863 - 441 73668957 - Mbar_A1433 - replication factor A 1398 44.24 0 1765178..1766305 + 375 73668958 - Mbar_A1434 - cell surface protein 1399 41.77 0 1766707..1767714 - 335 73668959 - Mbar_A1435 - hypothetical protein 1400 41.89 0 1770273..1771184 + 303 73668960 - Mbar_A1437 - cobalt-zinc-cadmium resistance protein 1401 49.36 +1 1771190..1772287 + 365 73668961 - Mbar_A1438 - chorismate synthase 1402 30.67 -2 1772711..1773349 - 212 73668962 - Mbar_A1439 - methyltransferase 1403 35.87 -1 1773978..1774253 + 91 73668963 - Mbar_A1440 - hypothetical protein 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0