version 1.0
Methanosarcina barkeri str. fusaro chromosome 1, complete sequence - 1..4837408 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1213 39.44 0 1543911..1546007 - 698 73668773 - Mbar_A1243 - hypothetical protein 1214 43.17 0 1546247..1547791 - 514 73668774 - Mbar_A1244 - hypothetical protein 1215 34.45 -1 1549071..1549784 + 237 73668775 - Mbar_A1245 - hypothetical protein 1216 31.53 -2 1552086..1552640 + 184 73668776 - Mbar_A1247 - hypothetical protein 1217 34.00 -1 1552932..1553381 + 149 73668777 - Mbar_A1248 - hypothetical protein 1218 48.77 +1 1553576..1554145 + 189 73668778 - Mbar_A1249 - L-fuculose phosphate aldolase 1219 44.77 0 1554476..1555087 + 203 73668779 - Mbar_A1250 - CDP-alcohol phosphatidyltransferase 1220 40.59 0 1555650..1556090 + 146 73668780 - Mbar_A1251 - archease family protein 1221 47.64 +1 1556509..1558011 + 500 73668781 - Mbar_A1252 - hypothetical protein 1222 37.92 0 1558406..1559518 - 370 73668782 - Mbar_A1253 - hypothetical protein 1223 49.00 +1 1561547..1562497 - 316 73668783 - Mbar_A1255 - tetrahydromethanopterin S-methyltransferase subunit H 1224 39.27 0 1562511..1562729 - 72 73668784 - Mbar_A1256 - tetrahydromethanopterin S-methyltransferase subunit G 1225 47.30 +1 1562743..1562964 - 73 73668785 mtrF Mbar_A1257 - tetrahydromethanopterin S-methyltransferase subunit F 1226 47.99 +1 1562964..1563686 - 240 73668786 - Mbar_A1258 - tetrahydromethanopterin S-methyltransferase subunit A 1227 46.18 0 1563688..1564014 - 108 73668787 - Mbar_A1259 - tetrahydromethanopterin S-methyltransferase subunit B 1228 47.51 +1 1564011..1564814 - 267 73668788 - Mbar_A1260 - tetrahydromethanopterin S-methyltransferase subunit C 1229 47.68 +1 1564816..1565568 - 250 73668789 - Mbar_A1261 - tetrahydromethanopterin S-methyltransferase subunit D 1230 45.43 0 1565565..1566473 - 302 73668790 - Mbar_A1262 - tetrahydromethanopterin S-methyltransferase subunit E 1231 43.33 0 1567284..1568093 + 269 73668791 - Mbar_A1263 - hypothetical protein 1232 44.22 0 1568166..1570085 - 639 73668792 - Mbar_A1264 - sodium:proline symporter (proline permease) 1233 42.35 0 1571283..1571870 + 195 73668793 - Mbar_A1265 - putative molybdenum transport protein ModA 1234 31.08 -2 1572434..1573498 + 354 73668794 - Mbar_A1266 - transposase, putative 1235 42.12 0 1573832..1574890 - 352 73668795 - Mbar_A1267 - hypothetical protein 1236 38.58 0 1574883..1576025 - 380 73668796 - Mbar_A1268 - hypothetical protein 1237 43.12 0 1576022..1578268 - 748 73668797 - Mbar_A1269 - RND superfamily protein 1238 37.29 0 1578726..1579508 + 260 73668798 - Mbar_A1270 - transcriptional regulator 1239 45.10 0 1579730..1580392 + 220 73668799 - Mbar_A1271 - hypothetical protein 1240 41.36 0 1580455..1580778 + 107 73668800 - Mbar_A1272 - putative ribonuclease P subunit RPR2 1241 46.47 0 1580945..1581256 - 103 73668801 - Mbar_A1273 - signal recognition particle protein Srp19 1242 41.09 0 1581413..1581670 + 85 73668802 - Mbar_A1274 - hypothetical protein 1243 40.97 0 1581883..1582746 + 287 73668803 - Mbar_A1275 - hypothetical protein 1244 39.19 0 1582779..1583546 + 255 73668804 - Mbar_A1276 - hypothetical protein 1245 29.88 -2 1584166..1584570 + 134 73668805 - Mbar_A1277 - hypothetical protein 1246 40.00 0 1585385..1585624 - 79 73668806 - Mbar_A1278 - hypothetical protein 1247 44.62 0 1586067..1586828 - 253 73668807 - Mbar_A1279 - UbiE/COQ5 methyltransferase 1248 46.75 +1 1586825..1587532 - 235 73668808 - Mbar_A1280 - oligopeptide ABC transporter, ATP-binding protein 1249 45.75 0 1587508..1588449 - 313 73668809 - Mbar_A1281 - oligopeptide ABC transporter, ATP-binding protein 1250 46.18 0 1588446..1589348 - 300 73668810 - Mbar_A1282 - oligopeptide ABC transporter, permease protein 1251 45.65 0 1589353..1590294 - 313 73668811 - Mbar_A1283 - oligopeptide ABC transporter, permease protein 1252 43.77 0 1590414..1592051 - 545 73668812 - Mbar_A1284 - oligopeptide ABC transporter, solute-binding protein 1253 46.01 0 1592080..1592868 - 262 73668813 - Mbar_A1285 - hypothetical protein 1254 42.95 0 1593420..1594532 + 370 73668814 - Mbar_A1286 - ABC transporter, solute-binding protein 1255 44.78 0 1595272..1595874 + 200 73668815 - Mbar_A1287 - formylmethanofuran dehydrogenase, subunit E 1256 47.74 +1 1595893..1596933 + 346 73668816 - Mbar_A1288 - formylmethanofuran dehydrogenase, subunit F 1257 45.81 0 1596934..1598688 + 584 73668817 - Mbar_A1289 - formylmethanofuran dehydrogenase, subunit A 1258 47.90 +1 1598693..1599598 + 301 73668818 - Mbar_A1290 - formylmethanofuran dehydrogenase, subunit C 1259 44.36 0 1599609..1599998 + 129 73668819 - Mbar_A1291 - formylmethanofuran dehydrogenase, subunit D 1260 48.16 +1 1600001..1601302 + 433 73668820 - Mbar_A1292 - formylmethanofuran dehydrogenase, subunit B 1261 42.59 0 1601704..1602459 + 251 73668821 - Mbar_A1293 - outer membrane protein 1262 43.58 0 1602974..1604086 - 370 73668822 - Mbar_A1294 - phosphoserine aminotransferase 1263 37.24 0 1604676..1605290 + 204 73668823 - Mbar_A1295 - phosphoribosylglycinamide formyltransferase 1264 38.55 0 1605712..1606458 - 248 73668824 - Mbar_A1296 - hypothetical protein 1265 43.10 0 1606924..1607394 - 156 73668825 - Mbar_A1297 - hypothetical protein 1266 39.34 0 1607902..1608417 - 171 73668826 - Mbar_A1298 - hypothetical protein 1267 36.93 -1 1609109..1609414 - 101 73668827 - Mbar_A1299 - hypothetical protein 1268 37.13 0 1609779..1610780 + 333 73668828 - Mbar_A1300 - hypothetical protein 1269 29.52 -2 1611196..1611588 - 130 73668829 - Mbar_A1301 - hypothetical protein 1270 31.50 -2 1611934..1612206 + 90 73668830 - Mbar_A1302 - hypothetical protein 1271 43.67 0 1612744..1613652 - 302 73668831 - Mbar_A1303 - hypothetical protein 1272 45.58 0 1613684..1614475 - 263 73668832 - Mbar_A1304 - nicotinate-nucleotide pyrophosphorylase (carboxylating) 1273 45.48 0 1614723..1615784 - 353 73668833 - Mbar_A1305 - molybdate ABC transporter, ATP-binding protein 1274 44.61 0 1615781..1616587 - 268 73668834 - Mbar_A1306 - molybdate ABC transporter, permease protein 1275 43.59 0 1616575..1617393 - 272 73668835 - Mbar_A1307 - molybdate-binding protein 1276 41.90 0 1617557..1618198 - 213 73668836 - Mbar_A1308 - putative NAD(P)H oxidoreductase(quinone) 1277 37.97 0 1618456..1618692 - 78 73668837 - Mbar_A1309 - hypothetical protein 1278 47.40 +1 1618715..1619290 - 191 73668838 hisB Mbar_A1310 - imidazoleglycerol-phosphate dehydratase 1279 47.56 +1 1619431..1620168 - 245 73668839 - Mbar_A1311 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1280 45.06 0 1620283..1621152 - 289 73668840 hisG Mbar_A1312 - ATP phosphoribosyltransferase 1281 46.45 0 1621639..1622835 + 398 73668841 - Mbar_A1313 - S-adenosylmethionine synthetase 1282 39.21 0 1624356..1624985 + 209 73668842 - Mbar_A1314 - hypothetical protein 1283 46.24 0 1625024..1626193 + 389 73668843 - Mbar_A1315 - Xaa-Pro dipeptidase (cobalt-dependent) 1284 48.26 +1 1626542..1627432 + 296 73668844 - Mbar_A1316 - methionine aminopeptidase 1285 40.00 0 1627750..1628574 + 274 73668845 - Mbar_A1317 - hypothetical protein 1286 48.26 +1 1628591..1628878 + 95 73668846 - Mbar_A1318 - hypothetical protein 1287 31.86 -2 1629196..1629399 + 67 73668847 - Mbar_A1319 - O-antigen related protein 1288 38.10 0 1629484..1629588 + 34 73668848 - Mbar_A1320 - hypothetical protein 1289 30.75 -2 1630758..1631801 - 347 73668849 - Mbar_A1321 - hypothetical protein 1290 31.74 -2 1634530..1635405 - 291 73668850 - Mbar_A1323 - hypothetical protein 1291 34.65 -1 1635424..1635651 - 75 73668851 - Mbar_A1324 - hypothetical protein 1292 38.33 0 1635687..1636106 - 139 73668852 - Mbar_A1325 - hypothetical protein 1293 36.39 -1 1636905..1637918 + 337 73668853 - Mbar_A1326 - hypothetical protein 1294 39.13 0 1638034..1639050 - 338 73668854 - Mbar_A1327 - hypothetical protein 1295 34.65 -1 1639524..1639751 - 75 73668855 - Mbar_A1328 - hypothetical protein 1296 37.62 0 1639787..1640206 - 139 73668856 - Mbar_A1329 - hypothetical protein 1297 46.44 0 1640499..1641566 + 355 73668857 - Mbar_A1330 - N2-methylguanosine tRNA methyltransferase 1298 36.19 -1 1641810..1643069 + 419 73668858 - Mbar_A1331 - hypothetical protein 1299 46.17 0 1643474..1644283 - 269 73668859 truA Mbar_A1332 - tRNA pseudouridine synthase A 1300 44.99 0 1644292..1645209 - 305 73668860 - Mbar_A1333 - ArsR family transcriptional regulator 1301 45.38 0 1645399..1646469 + 356 73668861 purP Mbar_A1334 - 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase 1302 35.44 -1 1646712..1647803 - 363 73668862 - Mbar_A1335 - hypothetical protein 1303 37.67 0 1647855..1648223 - 122 73668863 - Mbar_A1336 - hypothetical protein 1304 46.11 0 1648491..1649828 + 445 73668864 - Mbar_A1337 - hypothetical protein 1305 46.83 +1 1650017..1650505 + 162 73668865 leuD Mbar_A1338 - 3-isopropylmalate dehydratase small subunit 1306 47.25 +1 1650601..1651728 + 375 73668866 - Mbar_A1339 - 3-isopropylmalate dehydrogenase 1307 37.25 0 1653694..1654305 - 203 73668867 - Mbar_A1341 - dipeptide ABC transporter, ATP-binding protein 1308 41.13 0 1654295..1655218 - 307 73668868 - Mbar_A1342 - dipeptide ABC transporter, ATP-binding protein 1309 42.42 0 1655681..1656538 - 285 73668869 - Mbar_A1343 - dipeptide ABC transporter, permease protein 1310 41.89 0 1656535..1657527 - 330 73668870 - Mbar_A1344 - dipeptide ABC transporter, permease protein 1311 44.91 0 1657967..1659625 - 552 73668871 - Mbar_A1345 - dipeptide ABC transporter, solute-binding protein 1312 39.32 0 1662066..1662884 - 272 73668872 - Mbar_A1346 - transposase 41.74 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0