IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
797	 34.98	-2	888332..889363	+	343	152994840	-	Mmwyl1_0806	-	putative poly-gamma-glutamate biosynthesis (capsule formation)-like protein
798	 33.63	-2	889356..890714	+	452	152994841	-	Mmwyl1_0807	-	coenzyme F390 synthetase-like protein
799	 42.82	0	890717..892855	+	712	152994842	-	Mmwyl1_0808	-	alcohol dehydrogenase
800	 37.29	-1	892852..894495	+	547	152994843	-	Mmwyl1_0809	-	heparinase II/III family protein
801	 39.29	-1	894492..895667	+	391	152994844	-	Mmwyl1_0810	-	glycosyl transferase group 1
802	 42.89	0	895657..896598	+	313	152994845	-	Mmwyl1_0811	-	NAD-dependent epimerase/dehydratase
803	 45.16	0	896611..897168	+	185	152994846	-	Mmwyl1_0812	-	sugar transferase
804	 42.58	0	897438..899417	+	659	152994847	-	Mmwyl1_0813	-	polysaccharide biosynthesis protein CapD
805	 42.59	0	900212..901540	+	442	152994848	-	Mmwyl1_0814	-	hypothetical protein
806	 44.18	0	902189..903202	+	337	152994849	-	Mmwyl1_0816	-	UDP-glucose 4-epimerase
807	 39.93	0	903344..903646	+	100	152994850	-	Mmwyl1_0817	-	DNA polymerase beta subunit
808	 41.77	0	903643..904104	+	153	152994851	-	Mmwyl1_0818	-	hypothetical protein
809	 38.71	-1	904177..904269	-	30	152994852	-	Mmwyl1_0819	-	Il-IS_3, transposase
810	 44.71	0	904752..906149	+	465	152994853	-	Mmwyl1_0820	-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
811	 39.51	-1	906802..908097	+	431	152994854	-	Mmwyl1_0821	-	UDP-glucose/GDP-mannose dehydrogenase
812	 39.64	-1	908132..909082	+	316	152994855	-	Mmwyl1_0822	-	oxidoreductase domain-containing protein
813	 43.13	0	909085..909666	+	193	152994856	-	Mmwyl1_0823	-	WbbJ protein
814	 45.28	0	909663..910742	+	359	152994857	-	Mmwyl1_0824	-	DegT/DnrJ/EryC1/StrS aminotransferase
815	 38.74	-1	911071..911181	+	36	152994858	-	Mmwyl1_0826	-	glucose-1-phosphate thymidylyltransferase
816	 31.03	-2	911190..912233	+	347	152994859	-	Mmwyl1_0827	-	4-alpha-L-fucosyltransferase
817	 34.99	-2	912244..912906	+	220	152994860	-	Mmwyl1_0828	-	acyltransferase
818	 35.19	-2	912907..913821	+	304	152994861	-	Mmwyl1_0829	-	hypothetical protein
819	 31.09	-2	913818..914621	+	267	152994862	-	Mmwyl1_0830	-	phytanoyl-CoA dioxygenase
820	 33.19	-2	914618..915310	+	230	152994863	-	Mmwyl1_0831	-	WbqC-like family protein
821	 40.21	0	915310..916443	+	377	152994864	-	Mmwyl1_0832	-	TDP-4-oxo-6-deoxy-D-glucose transaminase
822	 33.53	-2	916436..917449	+	337	152994865	-	Mmwyl1_0833	-	acyltransferase 3
823	 36.58	-1	917446..918861	+	471	152994866	-	Mmwyl1_0834	-	polysaccharide biosynthesis protein
824	 36.71	-1	918974..920068	+	364	152994867	-	Mmwyl1_0835	-	UDP-N-acetylglucosamine 2-epimerase
825	 34.43	-2	920065..921336	+	423	152994868	-	Mmwyl1_0836	-	hypothetical protein
826	 42.91	0	921502..922587	+	361	152994869	-	Mmwyl1_0837	-	dTDP-glucose 4,6-dehydratase
827	 43.99	0	922598..923479	+	293	152994870	-	Mmwyl1_0838	-	glucose-1-phosphate thymidylyltransferase
828	 41.15	0	923506..924042	+	178	152994871	-	Mmwyl1_0839	-	dTDP-4-dehydrorhamnose 3,5-epimerase
829	 42.92	0	924043..924918	+	291	152994872	-	Mmwyl1_0840	-	dTDP-4-dehydrorhamnose reductase
830	 39.52	-1	924915..925835	+	306	152994873	-	Mmwyl1_0841	-	glycosyl transferase family protein
831	 38.21	-1	925847..927262	-	471	152994874	-	Mmwyl1_0842	-	undecaprenyl-phosphate galactose phosphotransferase
832	 38.93	-1	927321..928643	-	440	152994875	-	Mmwyl1_0843	-	O-antigen polymerase
833	 42.52	0	928858..929586	-	242	152994876	-	Mmwyl1_0844	-	peptidylprolyl isomerase FKBP-type
834	 39.24	-1	930093..931430	-	445	152994877	-	Mmwyl1_0845	-	LmbE family protein
835	 39.59	-1	931473..932654	-	393	152994878	-	Mmwyl1_0846	-	glycosyl transferase group 1
836	 46.67	+1	932793..933707	-	304	152994879	-	Mmwyl1_0847	-	protein of unknown function DUF340 membrane
837	 41.12	0	934088..934729	+	213	152994880	-	Mmwyl1_0848	-	hypothetical protein
838	 38.89	-1	934723..935550	+	275	152994881	-	Mmwyl1_0849	-	hypothetical protein
839	 44.32	0	935769..937088	+	439	152994882	-	Mmwyl1_0850	-	MATE efflux family protein
840	 44.86	0	937155..937952	-	265	152994883	-	Mmwyl1_0851	-	ABC transporter related
841	 44.97	0	937952..938965	-	337	152994884	-	Mmwyl1_0852	-	transport system permease protein
842	 47.45	+1	938962..939804	-	280	152994885	-	Mmwyl1_0853	-	periplasmic binding protein
843	 43.90	0	939801..940898	-	365	152994886	-	Mmwyl1_0854	-	hemin-degrading family protein
844	 43.36	0	940977..943121	-	714	152994887	-	Mmwyl1_0855	-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor
845	 43.19	0	943460..943804	-	114	152994888	-	Mmwyl1_0856	-	protein of unknown function DUF861 cupin_3
846	 41.14	0	944220..946319	+	699	152994889	-	Mmwyl1_0857	-	hypothetical protein
847	 37.39	-1	946407..947441	-	344	152994890	-	Mmwyl1_0858	-	TRAP dicarboxylate transporter, DctP subunit
848	 41.39	0	947461..948738	-	425	152994891	-	Mmwyl1_0859	-	TRAP dicarboxylate transporter, DctM subunit
849	 32.57	-2	948738..949262	-	174	152994892	-	Mmwyl1_0860	-	tripartite ATP-independent periplasmic transporter DctQ
850	 46.27	0	949306..951090	-	594	152994893	-	Mmwyl1_0861	-	dihydroxy-acid dehydratase
851	 43.14	0	951163..952365	-	400	152994894	-	Mmwyl1_0862	-	hypothetical protein
852	 41.38	0	952479..953447	+	322	152994895	-	Mmwyl1_0863	-	LysR family transcriptional regulator
853	 43.42	0	953535..955121	+	528	152994896	-	Mmwyl1_0864	-	aldehyde dehydrogenase
854	 42.86	0	955150..955884	+	244	152994897	-	Mmwyl1_0865	-	short-chain dehydrogenase/reductase SDR
855	 42.87	0	955932..956780	+	282	152994898	-	Mmwyl1_0866	-	5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase
856	 46.62	+1	956845..958560	-	571	152994899	-	Mmwyl1_0867	-	sulfate transporter
857	 45.56	0	958574..960193	-	539	152994900	-	Mmwyl1_0868	-	hypothetical protein
858	 43.76	0	960296..961177	-	293	152994901	-	Mmwyl1_0869	-	beta-lactamase domain-containing protein
859	 43.76	0	961348..962757	+	469	152994902	-	Mmwyl1_0870	-	putative PAS/PAC sensor protein
860	 45.13	0	962896..963429	+	177	152994903	-	Mmwyl1_0871	-	PEBP family protein
861	 42.25	0	963453..964226	+	257	152994904	-	Mmwyl1_0872	-	helix-turn-helix domain-containing protein
862	 46.02	0	964241..965383	-	380	152994905	-	Mmwyl1_0873	-	ABC-2 type transporter
863	 46.71	+1	965373..966314	-	313	152994906	-	Mmwyl1_0874	-	ABC transporter related
864	 48.84	+1	966311..967258	-	315	152994907	-	Mmwyl1_0875	-	secretion protein HlyD family protein
865	 41.85	0	967255..967935	-	226	152994908	-	Mmwyl1_0876	-	TetR family transcriptional regulator
866	 44.55	0	968144..969766	-	540	152994909	-	Mmwyl1_0877	-	methyl-accepting chemotaxis sensory transducer
867	 45.56	0	969920..970753	+	277	152994910	-	Mmwyl1_0878	-	short-chain dehydrogenase/reductase SDR
868	 43.08	0	970779..971783	-	334	152994911	-	Mmwyl1_0879	-	hypothetical protein
869	 42.01	0	971802..972089	-	95	152994912	-	Mmwyl1_0880	-	hypothetical protein
870	 42.13	0	972262..973239	+	325	152994913	-	Mmwyl1_0881	-	periplasmic binding protein/LacI transcriptional regulator
871	 45.04	0	973408..974646	+	412	152994914	-	Mmwyl1_0882	-	extracellular solute-binding protein
872	 46.41	+1	974744..975661	+	305	152994915	-	Mmwyl1_0883	-	binding-protein-dependent transport systems inner membrane component
873	 44.52	0	975671..976564	+	297	152994916	-	Mmwyl1_0884	-	binding-protein-dependent transport systems inner membrane component
874	 42.09	0	976569..977642	+	357	152994917	-	Mmwyl1_0885	-	ABC transporter related
875	 42.09	0	977681..978445	+	254	152994918	-	Mmwyl1_0886	-	xylose isomerase domain-containing protein
876	 44.82	0	978442..979581	+	379	152994919	-	Mmwyl1_0887	-	oxidoreductase domain-containing protein
877	 48.77	+1	979591..980646	+	351	152994920	-	Mmwyl1_0888	-	xylose isomerase domain-containing protein
878	 47.58	+1	980651..981787	+	378	152994921	-	Mmwyl1_0889	-	oxidoreductase domain-containing protein
879	 41.44	0	981906..982127	+	73	152994922	-	Mmwyl1_0890	-	hypothetical protein
880	 39.84	0	982124..983122	-	332	152994923	-	Mmwyl1_0891	-	diguanylate cyclase
881	 37.14	-1	983180..984151	-	323	152994924	-	Mmwyl1_0892	-	diguanylate cyclase
882	 42.98	0	984315..984791	-	158	152994925	-	Mmwyl1_0893	-	hypothetical protein
883	 41.80	0	984959..985336	+	125	152994926	-	Mmwyl1_0894	-	membrane protein-like protein
884	 40.42	0	985416..986276	-	286	152994927	-	Mmwyl1_0895	-	hypothetical protein
885	 42.57	0	986465..987871	+	468	152994928	-	Mmwyl1_0896	-	amidohydrolase
886	 47.10	+1	988059..989402	+	447	152994929	-	Mmwyl1_0897	-	beta-lactamase domain-containing protein
887	 47.12	+1	989435..990457	-	340	152994930	-	Mmwyl1_0898	-	lysine 2,3-aminomutase YodO family protein
888	 46.70	+1	990672..991247	+	191	152994931	-	Mmwyl1_0899	-	translation elongation factor P
889	 42.08	0	991342..992244	-	300	152994932	-	Mmwyl1_0900	-	LysR family transcriptional regulator
890	 42.11	0	992370..992927	+	185	152994933	-	Mmwyl1_0901	-	hypothetical protein
891	 41.18	0	992927..993181	+	84	152994934	-	Mmwyl1_0902	-	hypothetical protein
892	 38.93	-1	993527..993973	+	148	152994935	-	Mmwyl1_0904	-	GCN5-related N-acetyltransferase
893	 44.05	0	994083..995360	-	425	152994936	-	Mmwyl1_0905	-	6-aminohexanoate-dimer hydrolase
894	 38.73	-1	995466..996632	-	388	152994937	-	Mmwyl1_0906	-	regulatory protein LuxR
895	 44.14	0	996988..997431	-	147	152994938	-	Mmwyl1_0907	-	DoxX family protein
896	 46.78	+1	997757..998485	+	242	152994939	-	Mmwyl1_0908	-	short-chain dehydrogenase/reductase SDR
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.