IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
691	 49.62	+1	757557..758219	+	220	152994734	-	Mmwyl1_0700	-	exonuclease RNase T and DNA polymerase III
692	 41.28	0	758498..759844	+	448	152994735	-	Mmwyl1_0701	-	sodium/glutamate symporter
693	 35.29	-2	760084..760185	+	33	152994736	-	Mmwyl1_0702	-	hypothetical protein
694	 40.85	0	760354..761178	+	274	152994737	-	Mmwyl1_0703	-	methylenetetrahydrofolate reductase
695	 46.64	+1	761285..762088	-	267	152994738	-	Mmwyl1_0704	-	metallophosphoesterase
696	 42.02	0	762154..763926	-	590	152994739	-	Mmwyl1_0705	-	diguanylate cyclase/phosphodiesterase
697	 43.30	0	764590..765492	-	300	152994740	-	Mmwyl1_0706	-	AraC family transcriptional regulator
698	 45.47	0	766041..767243	+	400	152994741	-	Mmwyl1_0707	-	4-hydroxybenzoate 3-monooxygenase
699	 43.84	0	767344..767676	-	110	152994742	-	Mmwyl1_0708	-	SecC motif-containing protein
700	 43.31	0	768228..769259	+	343	152994743	-	Mmwyl1_0709	-	TRAP dicarboxylate transporter- DctP subunit
701	 42.55	0	769307..769816	+	169	152994744	-	Mmwyl1_0710	-	hypothetical protein
702	 44.13	0	769813..771099	+	428	152994745	-	Mmwyl1_0711	-	TRAP dicarboxylate transporter, DctM subunit
703	 45.09	0	771185..772213	-	342	152994746	-	Mmwyl1_0712	-	hypothetical protein
704	 43.70	0	772216..772842	-	208	152994747	-	Mmwyl1_0713	-	hypothetical protein
705	 43.12	0	772899..774563	-	554	152994748	-	Mmwyl1_0714	-	hypothetical protein
706	 42.08	0	774825..775304	-	159	152994749	-	Mmwyl1_0715	-	protein-export protein SecB
707	 46.03	0	775390..775641	-	83	152994750	-	Mmwyl1_0716	-	glutaredoxin 3
708	 44.37	0	775653..776087	-	144	152994751	-	Mmwyl1_0717	-	rhodanese domain-containing protein
709	 43.53	0	776281..777084	-	267	152994752	-	Mmwyl1_0718	-	hypothetical protein
710	 45.52	0	777183..778052	-	289	152994753	-	Mmwyl1_0719	-	LysR family transcriptional regulator
711	 46.15	0	778245..779789	+	514	152994754	-	Mmwyl1_0720	-	aldehyde dehydrogenase
712	 47.41	+1	779912..781183	+	423	152994755	-	Mmwyl1_0721	-	FAD dependent oxidoreductase
713	 45.48	0	781393..782322	+	309	152994756	-	Mmwyl1_0722	-	LysR family transcriptional regulator
714	 45.23	0	782478..784007	+	509	152994757	-	Mmwyl1_0723	-	phosphoglyceromutase
715	 41.93	0	784015..785154	+	379	152994758	-	Mmwyl1_0724	-	peptidase M23B
716	 41.34	0	785206..786492	+	428	152994759	-	Mmwyl1_0725	-	carboxyl-terminal protease
717	 42.92	0	786557..787735	+	392	152994760	-	Mmwyl1_0726	-	protein of unknown function DUF610 YibQ
718	 42.95	0	788213..789325	+	370	152994761	-	Mmwyl1_0727	-	extracellular ligand-binding receptor
719	 41.45	0	789434..790345	+	303	152994762	-	Mmwyl1_0728	-	inner-membrane translocator
720	 41.65	0	790346..791620	+	424	152994763	-	Mmwyl1_0729	-	inner-membrane translocator
721	 43.31	0	791617..792498	+	293	152994764	-	Mmwyl1_0730	-	ABC transporter related
722	 44.54	0	792495..793208	+	237	152994765	-	Mmwyl1_0731	-	ABC transporter related
723	 46.77	+1	793378..793935	-	185	152994766	-	Mmwyl1_0732	-	SUA5/yciO/yrdC domain-containing protein
724	 40.42	0	794105..794485	-	126	152994767	-	Mmwyl1_0733	-	hypothetical protein
725	 44.98	0	794640..796073	-	477	152994768	-	Mmwyl1_0734	-	nitrogen metabolism transcriptional regulator, NtrC, Fis family
726	 43.09	0	796070..797227	-	385	152994769	-	Mmwyl1_0735	-	signal transduction histidine kinase, nitrogen specific, NtrB
727	 45.20	0	797448..798854	-	468	152994770	-	Mmwyl1_0736	-	glutamine synthetase, type I
728	 41.12	0	799184..800635	+	483	152994771	-	Mmwyl1_0737	-	thiamine biosynthesis protein ThiI
729	 43.38	0	800884..802704	+	606	152994772	-	Mmwyl1_0738	-	GTP-binding protein TypA
730	 43.91	0	802862..803296	+	144	152994773	-	Mmwyl1_0739	-	D-tyrosyl-tRNA deacylase
731	 42.49	0	803312..805909	-	865	152994774	-	Mmwyl1_0740	-	pectinesterase
732	 42.08	0	806144..806920	-	258	152994775	-	Mmwyl1_0741	-	Sec-independent protein translocase, TatC subunit
733	 44.52	0	806956..807420	-	154	152994776	-	Mmwyl1_0742	-	twin-arginine translocation protein, TatB subunit
734	 41.55	0	807424..807642	-	72	152994777	-	Mmwyl1_0743	-	twin arginine-targeting protein translocase
735	 40.24	0	807659..807991	-	110	152994778	-	Mmwyl1_0744	-	phosphoribosyl-ATP pyrophosphohydrolase
736	 43.31	0	808008..809651	-	547	152994779	-	Mmwyl1_0745	-	2-polyprenylphenol 6-hydroxylase
737	 43.92	0	809654..810409	-	251	152994780	-	Mmwyl1_0746	-	ubiquinone/menaquinone biosynthesis methyltransferase
738	 40.73	0	810573..812099	-	508	152994781	-	Mmwyl1_0747	-	diguanylate cyclase
739	 39.77	0	812112..812732	-	206	152994782	-	Mmwyl1_0748	-	DSBA oxidoreductase
740	 43.26	0	813058..813702	+	214	152994783	-	Mmwyl1_0749	-	GTP-binding protein HSR1-related
741	 44.19	0	813772..815364	-	530	152994784	-	Mmwyl1_0750	-	glutamate--cysteine ligase
742	 48.97	+1	815590..816363	-	257	152994785	-	Mmwyl1_0751	-	imidazoleglycerol phosphate synthase, cyclase subunit
743	 45.55	0	816419..817081	-	220	152994786	-	Mmwyl1_0752	-	imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
744	 46.97	+1	817094..817687	-	197	152994787	-	Mmwyl1_0753	-	imidazoleglycerol-phosphate dehydratase
745	 41.73	0	817984..820221	+	745	152994788	-	Mmwyl1_0754	-	AsmA family protein
746	 46.15	0	820269..821321	+	350	152994789	-	Mmwyl1_0755	-	A/G-specific adenine glycosylase
747	 45.02	0	821337..822551	+	404	152994790	-	Mmwyl1_0756	-	chromate transporter
748	 45.06	0	822632..823441	-	269	152994791	-	Mmwyl1_0757	-	integrase catalytic region
749	 46.08	0	823486..823791	-	101	152994792	-	Mmwyl1_0758	-	transposase IS3/IS911 family protein
750	 39.30	-1	823940..824224	+	94	152994793	-	Mmwyl1_0759	-	hypothetical protein
751	 41.84	0	824331..824753	-	140	152994794	-	Mmwyl1_0760	-	flagellar basal body-associated protein FliL
752	 40.43	0	824898..825404	+	168	152994795	-	Mmwyl1_0761	-	disulphide bond formation protein DsbB
753	 43.10	0	825571..826041	+	156	152994796	-	Mmwyl1_0762	-	anti-RNA polymerase sigma 70 factor
754	 43.60	0	826013..826996	+	327	152994797	-	Mmwyl1_0763	-	WD-40 repeat-containing protein
755	 43.33	0	827004..827483	+	159	152994798	-	Mmwyl1_0764	-	hypothetical protein
756	 44.68	0	827668..828381	+	237	152994799	-	Mmwyl1_0765	-	tRNA (guanine-N(7)-)-methyltransferase
757	 43.36	0	828477..828875	-	132	152994800	-	Mmwyl1_0766	-	histone family protein nucleoid-structuring protein H-NS
758	 41.10	0	829255..831417	+	720	152994801	-	Mmwyl1_0767	-	RNA-binding S1 domain-containing protein
759	 44.78	0	831568..832161	-	197	152994802	-	Mmwyl1_0768	-	NAD(P)H dehydrogenase (quinone)
760	 47.01	+1	832330..833250	+	306	152994803	-	Mmwyl1_0769	-	LysR family transcriptional regulator
761	 37.79	-1	833258..833818	-	186	152994804	-	Mmwyl1_0770	-	pyridoxamine 5'-phosphate oxidase-related FMN-binding
762	 44.27	0	834117..835478	+	453	152994805	-	Mmwyl1_0771	-	UDP-N-acetylglucosamine pyrophosphorylase
763	 43.79	0	835593..837419	+	608	152994806	-	Mmwyl1_0772	-	glucosamine--fructose-6-phosphate aminotransferase, isomerizing
764	 42.91	0	837519..838667	-	382	152994807	-	Mmwyl1_0773	-	oligogalacturonide lyase
765	 43.42	0	838931..839812	+	293	152994808	-	Mmwyl1_0774	-	binding-protein-dependent transport systems inner membrane component
766	 41.78	0	839815..840726	+	303	152994809	-	Mmwyl1_0775	-	binding-protein-dependent transport systems inner membrane component
767	 44.53	0	840736..841869	+	377	152994810	-	Mmwyl1_0776	-	ABC transporter related
768	 42.35	0	841953..843239	+	428	152994811	-	Mmwyl1_0777	-	extracellular solute-binding protein
769	 44.53	0	843499..844248	+	249	152994812	-	Mmwyl1_0778	-	2-deoxy-D-gluconate 3-dehydrogenase
770	 38.83	-1	844428..845264	+	278	152994813	-	Mmwyl1_0779	-	transcriptional regulator IclR
771	 40.81	0	845513..845833	+	106	152994814	-	Mmwyl1_0780	-	cupin 2 domain-containing protein
772	 44.34	0	845882..846517	+	211	152994815	-	Mmwyl1_0781	-	hypothetical protein
773	 36.57	-1	846774..847886	-	370	152994816	-	Mmwyl1_0782	-	response regulator receiver protein
774	 44.61	0	848035..858006	+	3323	152994817	-	Mmwyl1_0783	-	glycosyl hydrolase BNR repeat-containing glycosyl hydrolase
775	 44.65	0	858091..860220	+	709	152994818	-	Mmwyl1_0784	-	TPR repeat-containing protein
776	 43.09	0	860217..861518	+	433	152994819	-	Mmwyl1_0785	-	outer membrane efflux protein
777	 45.97	0	861542..863710	+	722	152994820	-	Mmwyl1_0786	-	ABC transporter related
778	 44.47	0	863700..864911	+	403	152994821	-	Mmwyl1_0787	-	HlyD family type I secretion membrane fusion protein
779	 36.42	-1	865416..865868	-	150	152994822	-	Mmwyl1_0788	-	hypothetical protein
780	 41.87	0	866124..868337	-	737	152994823	-	Mmwyl1_0789	-	protein of unknown function DUF940 membrane lipoprotein putative
781	 38.13	-1	868337..869128	-	263	152994824	-	Mmwyl1_0790	-	hypothetical protein
782	 38.01	-1	869141..869845	-	234	152994825	-	Mmwyl1_0791	-	putative regulator
783	 60.70	+2	869949..870317	+	122	152994826	-	Mmwyl1_0792	-	hypothetical protein
784	 43.15	0	870654..871988	+	444	152994827	-	Mmwyl1_0793	-	hypothetical protein
785	 45.71	0	872058..874667	+	869	152994828	-	Mmwyl1_0794	-	polysaccharide export protein
786	 46.41	+1	874844..875791	+	315	152994829	-	Mmwyl1_0795	-	lipopolysaccharide biosynthesis protein
787	 36.88	-1	875890..876369	-	159	152994830	-	Mmwyl1_0796	-	hypothetical protein
788	 44.77	0	876936..878369	-	477	152994831	-	Mmwyl1_0797	-	RNA-metabolising metallo-beta-lactamase
789	 36.45	-1	879358..879678	+	106	152994832	-	Mmwyl1_0798	-	AsnC family transcriptional regulator
790	 46.00	0	879984..880970	+	328	152994833	-	Mmwyl1_0799	-	NAD-dependent epimerase/dehydratase
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.