IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
627	 47.86	+1	693841..694260	+	139	152994670	-	Mmwyl1_0636	-	cytidine deaminase
628	 48.24	+1	694312..695391	-	359	152994671	-	Mmwyl1_0637	-	putative ammonia monooxygenase
629	 45.83	0	695685..696068	+	127	152994672	-	Mmwyl1_0638	-	rare lipoprotein A
630	 47.84	+1	696065..698497	-	810	152994673	-	Mmwyl1_0639	-	GCN5-related N-acetyltransferase
631	 45.78	0	698688..699611	+	307	152994674	-	Mmwyl1_0640	-	histone deacetylase superfamily protein
632	 43.74	0	699628..700290	-	220	152994675	-	Mmwyl1_0641	-	HAD family hydrolase
633	 42.30	0	700344..701648	-	434	152994676	-	Mmwyl1_0642	-	TRAP dicarboxylate transporter, DctM subunit
634	 37.04	-1	701650..702162	-	170	152994677	-	Mmwyl1_0643	-	hypothetical protein
635	 39.45	-1	702159..703139	-	326	152994678	-	Mmwyl1_0644	-	TRAP dicarboxylate transporter- DctP subunit
636	 40.74	0	703632..704657	+	341	152994679	-	Mmwyl1_0645	-	TRAP dicarboxylate transporter- DctP subunit
637	 40.74	0	704713..705225	+	170	152994680	-	Mmwyl1_0646	-	tripartite ATP-independent periplasmic transporter DctQ
638	 41.09	0	705222..706511	+	429	152994681	-	Mmwyl1_0647	-	TRAP dicarboxylate transporter, DctM subunit
639	 39.06	-1	706523..707587	-	354	152994682	-	Mmwyl1_0648	-	helix-turn-helix domain-containing protein
640	 47.86	+1	707782..708903	-	373	152994683	-	Mmwyl1_0649	-	sulfate ABC transporter, ATPase subunit
641	 48.04	+1	708900..709790	-	296	152994684	-	Mmwyl1_0650	-	sulfate ABC transporter, inner membrane subunit CysW
642	 49.83	+2	709800..710660	-	286	152994685	-	Mmwyl1_0651	-	sulfate ABC transporter, inner membrane subunit CysT
643	 41.32	0	710799..711812	-	337	152994686	-	Mmwyl1_0652	-	sulfate ABC transporter, periplasmic sulfate-binding protein
644	 44.00	0	712237..712461	+	74	152994687	-	Mmwyl1_0653	-	FeoA family protein
645	 46.30	0	712493..714574	+	693	152994688	-	Mmwyl1_0654	-	ferrous iron transport protein B
646	 44.19	0	714623..715414	-	263	152994689	-	Mmwyl1_0655	-	diguanylate cyclase
647	 44.23	0	715538..715849	-	103	152994690	-	Mmwyl1_0656	-	cupin 2 domain-containing protein
648	 40.35	0	716016..718451	+	811	152994691	-	Mmwyl1_0657	-	TPR repeat-containing protein
649	 42.71	0	718453..718740	-	95	152994692	-	Mmwyl1_0658	-	XRE family transcriptional regulator
650	 42.86	0	718876..719106	+	76	152994693	-	Mmwyl1_0659	-	Trp operon repressor
651	 45.55	0	719103..720518	+	471	152994694	-	Mmwyl1_0660	-	anthranilate synthase
652	 46.61	+1	720526..721188	+	220	152994695	-	Mmwyl1_0661	-	glutamine amidotransferase of anthranilate synthase
653	 37.78	-1	721332..721601	+	89	152994696	-	Mmwyl1_0662	-	hypothetical protein
654	 42.51	0	721595..722128	+	177	152994697	-	Mmwyl1_0663	-	putative transcriptional regulator
655	 39.22	-1	722266..722622	+	118	152994698	-	Mmwyl1_0664	-	hypothetical protein
656	 40.92	0	722622..722924	+	100	152994699	-	Mmwyl1_0665	-	XRE family transcriptional regulator
657	 37.44	-1	722935..723129	-	64	152994700	-	Mmwyl1_0666	-	RelB protein
658	 44.05	0	723348..723860	+	170	152994701	-	Mmwyl1_0667	-	hypothetical protein
659	 47.92	+1	723857..724624	-	255	152994702	-	Mmwyl1_0668	-	hypothetical protein
660	 43.23	0	724754..725218	+	154	152994703	-	Mmwyl1_0669	-	GCN5-related N-acetyltransferase
661	 41.41	0	725215..725895	+	226	152994704	-	Mmwyl1_0670	-	GDSL family lipase
662	 43.83	0	726069..727154	+	361	152994705	-	Mmwyl1_0671	-	TRAP dicarboxylate transporter- DctP subunit
663	 41.30	0	727220..727759	+	179	152994706	-	Mmwyl1_0672	-	tripartite ATP-independent periplasmic transporter DctQ
664	 43.41	0	727793..729082	+	429	152994707	-	Mmwyl1_0673	-	TRAP dicarboxylate transporter, DctM subunit
665	 39.96	0	729209..730552	+	447	152994708	-	Mmwyl1_0674	-	integral membrane sensor signal transduction histidine kinase
666	 39.57	-1	730719..731456	+	245	152994709	-	Mmwyl1_0675	-	two component transcriptional regulator
667	 40.65	0	731620..732822	+	400	152994710	-	Mmwyl1_0676	-	histidine kinase
668	 34.68	-2	733096..734802	+	568	152994711	-	Mmwyl1_0677	-	sulfatase
669	 36.64	-1	734806..735228	+	140	152994712	-	Mmwyl1_0678	-	diacylglycerol kinase
670	 39.72	0	735422..736063	+	213	152994713	-	Mmwyl1_0679	-	two component LuxR family transcriptional regulator
671	 44.88	0	736080..736928	+	282	152994714	-	Mmwyl1_0680	-	diaminopimelate epimerase
672	 44.24	0	737038..737844	+	268	152994715	-	Mmwyl1_0681	-	endo alpha-1,4 polygalactosaminidase precusor
673	 40.74	0	737982..738278	+	98	152994716	-	Mmwyl1_0682	-	stress responsive alpha-beta barrel domain-containing protein
674	 45.22	0	738371..739060	-	229	152994717	-	Mmwyl1_0683	-	ThiJ/PfpI domain-containing protein
675	 45.41	0	739220..740113	+	297	152994718	-	Mmwyl1_0684	-	LysR family transcriptional regulator
676	 42.94	0	740286..742148	+	620	152994719	-	Mmwyl1_0685	-	methyl-accepting chemotaxis sensory transducer
677	 41.85	0	742279..743934	-	551	152994720	-	Mmwyl1_0686	-	methyl-accepting chemotaxis sensory transducer
678	 41.12	0	744119..744529	+	136	152994721	-	Mmwyl1_0687	-	hypothetical protein
679	 42.16	0	744560..745114	+	184	152994722	-	Mmwyl1_0688	-	isochorismatase hydrolase
680	 45.02	0	745234..746568	-	444	152994723	-	Mmwyl1_0689	-	aminotransferase class I and II
681	 45.57	0	746748..747515	-	255	152994724	-	Mmwyl1_0690	-	ABC transporter related
682	 49.01	+1	747519..748475	-	318	152994725	-	Mmwyl1_0691	-	iron-dicitrate transporter subunit FecD
683	 50.60	+2	748475..749476	-	333	152994726	-	Mmwyl1_0692	-	transport system permease protein
684	 44.30	0	749473..750393	-	306	152994727	-	Mmwyl1_0693	-	periplasmic binding protein
685	 45.49	0	750513..751565	-	350	152994728	-	Mmwyl1_0694	-	regulatory protein LacI
686	 43.90	0	751702..752193	-	163	152994729	-	Mmwyl1_0695	-	carbohydrate kinase
687	 46.39	0	752279..753595	-	438	152994730	-	Mmwyl1_0696	-	TRAP dicarboxylate transporter, DctM subunit
688	 42.38	0	753588..754151	-	187	152994731	-	Mmwyl1_0697	-	tripartite ATP-independent periplasmic transporter DctQ
689	 45.33	0	754287..755303	-	338	152994732	-	Mmwyl1_0698	-	TRAP dicarboxylate transporter- DctP subunit
690	 47.34	+1	755679..757556	+	625	152994733	-	Mmwyl1_0699	-	CBS domain-containing protein
691	 49.62	+1	757557..758219	+	220	152994734	-	Mmwyl1_0700	-	exonuclease RNase T and DNA polymerase III
692	 41.28	0	758498..759844	+	448	152994735	-	Mmwyl1_0701	-	sodium/glutamate symporter
693	 35.29	-2	760084..760185	+	33	152994736	-	Mmwyl1_0702	-	hypothetical protein
694	 40.85	0	760354..761178	+	274	152994737	-	Mmwyl1_0703	-	methylenetetrahydrofolate reductase
695	 46.64	+1	761285..762088	-	267	152994738	-	Mmwyl1_0704	-	metallophosphoesterase
696	 42.02	0	762154..763926	-	590	152994739	-	Mmwyl1_0705	-	diguanylate cyclase/phosphodiesterase
697	 43.30	0	764590..765492	-	300	152994740	-	Mmwyl1_0706	-	AraC family transcriptional regulator
698	 45.47	0	766041..767243	+	400	152994741	-	Mmwyl1_0707	-	4-hydroxybenzoate 3-monooxygenase
699	 43.84	0	767344..767676	-	110	152994742	-	Mmwyl1_0708	-	SecC motif-containing protein
700	 43.31	0	768228..769259	+	343	152994743	-	Mmwyl1_0709	-	TRAP dicarboxylate transporter- DctP subunit
701	 42.55	0	769307..769816	+	169	152994744	-	Mmwyl1_0710	-	hypothetical protein
702	 44.13	0	769813..771099	+	428	152994745	-	Mmwyl1_0711	-	TRAP dicarboxylate transporter, DctM subunit
703	 45.09	0	771185..772213	-	342	152994746	-	Mmwyl1_0712	-	hypothetical protein
704	 43.70	0	772216..772842	-	208	152994747	-	Mmwyl1_0713	-	hypothetical protein
705	 43.12	0	772899..774563	-	554	152994748	-	Mmwyl1_0714	-	hypothetical protein
706	 42.08	0	774825..775304	-	159	152994749	-	Mmwyl1_0715	-	protein-export protein SecB
707	 46.03	0	775390..775641	-	83	152994750	-	Mmwyl1_0716	-	glutaredoxin 3
708	 44.37	0	775653..776087	-	144	152994751	-	Mmwyl1_0717	-	rhodanese domain-containing protein
709	 43.53	0	776281..777084	-	267	152994752	-	Mmwyl1_0718	-	hypothetical protein
710	 45.52	0	777183..778052	-	289	152994753	-	Mmwyl1_0719	-	LysR family transcriptional regulator
711	 46.15	0	778245..779789	+	514	152994754	-	Mmwyl1_0720	-	aldehyde dehydrogenase
712	 47.41	+1	779912..781183	+	423	152994755	-	Mmwyl1_0721	-	FAD dependent oxidoreductase
713	 45.48	0	781393..782322	+	309	152994756	-	Mmwyl1_0722	-	LysR family transcriptional regulator
714	 45.23	0	782478..784007	+	509	152994757	-	Mmwyl1_0723	-	phosphoglyceromutase
715	 41.93	0	784015..785154	+	379	152994758	-	Mmwyl1_0724	-	peptidase M23B
716	 41.34	0	785206..786492	+	428	152994759	-	Mmwyl1_0725	-	carboxyl-terminal protease
717	 42.92	0	786557..787735	+	392	152994760	-	Mmwyl1_0726	-	protein of unknown function DUF610 YibQ
718	 42.95	0	788213..789325	+	370	152994761	-	Mmwyl1_0727	-	extracellular ligand-binding receptor
719	 41.45	0	789434..790345	+	303	152994762	-	Mmwyl1_0728	-	inner-membrane translocator
720	 41.65	0	790346..791620	+	424	152994763	-	Mmwyl1_0729	-	inner-membrane translocator
721	 43.31	0	791617..792498	+	293	152994764	-	Mmwyl1_0730	-	ABC transporter related
722	 44.54	0	792495..793208	+	237	152994765	-	Mmwyl1_0731	-	ABC transporter related
723	 46.77	+1	793378..793935	-	185	152994766	-	Mmwyl1_0732	-	SUA5/yciO/yrdC domain-containing protein
724	 40.42	0	794105..794485	-	126	152994767	-	Mmwyl1_0733	-	hypothetical protein
725	 44.98	0	794640..796073	-	477	152994768	-	Mmwyl1_0734	-	nitrogen metabolism transcriptional regulator, NtrC, Fis family
726	 43.09	0	796070..797227	-	385	152994769	-	Mmwyl1_0735	-	signal transduction histidine kinase, nitrogen specific, NtrB
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.