IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4013	 42.42	0	4589850..4590575	-	241	152998056	-	Mmwyl1_4060	-	1-acyl-sn-glycerol-3-phosphate acyltransferase
4014	 42.57	0	4590639..4592945	-	768	152998057	-	Mmwyl1_4061	-	diguanylate cyclase/phosphodiesterase
4015	 44.00	0	4593061..4594044	-	327	152998058	-	Mmwyl1_4062	-	putative SAM-dependent methyltransferase
4016	 42.55	0	4594155..4595087	-	310	152998059	-	Mmwyl1_4063	-	LysR family transcriptional regulator
4017	 43.06	0	4595199..4596164	+	321	152998060	-	Mmwyl1_4064	-	hypothetical protein
4018	 42.45	0	4596189..4596539	-	116	152998061	-	Mmwyl1_4065	-	hypothetical protein
4019	 38.55	-1	4596626..4598179	-	517	152998062	-	Mmwyl1_4066	-	diguanylate phosphodiesterase
4020	 39.13	-1	4598426..4598977	-	183	152998063	-	Mmwyl1_4067	-	putative lipoprotein
4021	 40.05	0	4599014..4599742	-	242	152998064	-	Mmwyl1_4068	-	hypothetical protein
4022	 41.09	0	4599768..4600283	-	171	152998065	-	Mmwyl1_4069	-	hypothetical protein
4023	 42.55	0	4600298..4601566	-	422	152998066	-	Mmwyl1_4070	-	cyclopropane-fatty-acyl-phospholipid synthase
4024	 41.73	0	4601606..4602391	-	261	152998067	-	Mmwyl1_4071	-	hypothetical protein
4025	 44.60	0	4602385..4603635	-	416	152998068	-	Mmwyl1_4072	-	amine oxidase
4026	 43.48	0	4603701..4604459	-	252	152998069	-	Mmwyl1_4073	-	short-chain dehydrogenase/reductase SDR
4027	 38.22	-1	4604470..4604919	-	149	152998070	-	Mmwyl1_4074	-	hypothetical protein
4028	 44.44	0	4605180..4605755	+	191	152998071	-	Mmwyl1_4075	-	ECF subfamily RNA polymerase sigma-24 factor
4029	 42.67	0	4605761..4606456	+	231	152998072	-	Mmwyl1_4076	-	anti-ECFsigma factor, ChrR
4030	 40.00	0	4606952..4607161	+	69	152998073	-	Mmwyl1_4077	-	hypothetical protein
4031	 44.37	0	4607372..4609084	+	570	152998074	-	Mmwyl1_4078	-	phospholipid/glycerol acyltransferase
4032	 42.16	0	4609635..4609940	+	101	152998075	-	Mmwyl1_4079	-	glycoside hydrolase family 13 protein
4033	 49.25	+1	4610249..4611706	+	485	152998076	-	Mmwyl1_4080	-	betaine aldehyde dehydrogenase
4034	 48.54	+1	4611768..4613450	+	560	152998077	-	Mmwyl1_4081	-	choline dehydrogenase
4035	 44.65	0	4613531..4615465	-	644	152998078	-	Mmwyl1_4082	-	5'-nucleotidase domain-containing protein
4036	 47.05	+1	4615908..4616585	-	225	152998079	-	Mmwyl1_4083	-	hypothetical protein
4037	 42.66	0	4616696..4617274	+	192	152998080	-	Mmwyl1_4084	-	heat shock protein DnaJ domain-containing protein
4038	 45.71	0	4617418..4618605	+	395	152998081	-	Mmwyl1_4085	-	MltA domain-containing protein
4039	 44.82	0	4618720..4619607	-	295	152998082	-	Mmwyl1_4086	-	TonB family protein
4040	 42.36	0	4619604..4620035	-	143	152998083	-	Mmwyl1_4087	-	biopolymer transport protein ExbD/TolR
4041	 42.55	0	4620032..4620454	-	140	152998084	-	Mmwyl1_4088	-	biopolymer transport protein ExbD/TolR
4042	 43.04	0	4620444..4621154	-	236	152998085	-	Mmwyl1_4089	-	MotA/TolQ/ExbB proton channel
4043	 41.72	0	4621321..4622274	-	317	152998086	-	Mmwyl1_4090	-	magnesium and cobalt transport protein CorA
4044	 41.67	0	4622583..4623326	-	247	152998087	-	Mmwyl1_4091	-	ABC transporter related
4045	 43.88	0	4623339..4624457	-	372	152998088	-	Mmwyl1_4092	-	polar amino acid ABC transporter, inner membrane subunit
4046	 41.63	0	4624459..4625664	-	401	152998089	-	Mmwyl1_4093	-	binding-protein-dependent transport systems inner membrane component
4047	 44.71	0	4625689..4626708	-	339	152998090	-	Mmwyl1_4094	-	extracellular solute-binding protein
4048	 43.01	0	4626980..4627651	-	223	152998091	-	Mmwyl1_4095	-	GntR family transcriptional regulator
4049	 44.33	0	4627825..4629006	+	393	152998092	-	Mmwyl1_4096	-	isoaspartyl dipeptidase
4050	 42.91	0	4629419..4630003	-	194	152998093	-	Mmwyl1_4097	-	lysine exporter protein LysE/YggA
4051	 45.08	0	4630077..4630919	-	280	152998094	-	Mmwyl1_4098	-	AraC family transcriptional regulator
4052	 47.33	+1	4631006..4632334	-	442	152998095	-	Mmwyl1_4099	-	MATE efflux family protein
4053	 46.10	0	4632435..4633679	-	414	152998096	-	Mmwyl1_4100	-	Bcr/CflA subfamily drug resistance transporter
4054	 47.02	+1	4633743..4635101	-	452	152998097	-	Mmwyl1_4101	-	amidohydrolase
4055	 43.52	0	4635671..4636681	+	336	152998098	-	Mmwyl1_4102	-	NMT1/THI5-like domain-containing protein
4056	 48.05	+1	4636814..4637764	+	316	152998099	-	Mmwyl1_4103	-	LysR family transcriptional regulator
4057	 50.70	+2	4637851..4639359	-	502	152998100	-	Mmwyl1_4104	-	aldehyde dehydrogenase
4058	 49.06	+1	4639530..4641290	-	586	152998101	-	Mmwyl1_4105	-	dihydroxy-acid dehydratase
4059	 49.42	+1	4641287..4642057	-	256	152998102	-	Mmwyl1_4106	-	short-chain dehydrogenase/reductase SDR
4060	 45.97	0	4642054..4643034	-	326	152998103	-	Mmwyl1_4107	-	hypothetical protein
4061	 46.67	+1	4643058..4644257	-	399	152998104	-	Mmwyl1_4108	-	monosaccharide-transporting ATPase
4062	 45.68	0	4644271..4645809	-	512	152998105	-	Mmwyl1_4109	-	ABC transporter related
4063	 44.73	0	4645935..4646996	-	353	152998106	-	Mmwyl1_4110	-	monosaccharide-transporting ATPase
4064	 43.29	0	4647286..4648872	+	528	152998107	-	Mmwyl1_4111	-	sodium/hydrogen exchanger
4065	 43.86	0	4648965..4649135	-	56	152998108	-	Mmwyl1_4112	-	hypothetical protein
4066	 46.98	+1	4649299..4650720	-	473	152998109	-	Mmwyl1_4113	-	glutamate synthase, small subunit
4067	 45.62	0	4650839..4655224	-	1461	152998110	-	Mmwyl1_4114	-	glutamate synthase subunit alpha
4068	 44.57	0	4655807..4657372	-	521	152998111	-	Mmwyl1_4115	-	sporulation domain-containing protein
4069	 43.72	0	4657405..4658511	-	368	152998112	-	Mmwyl1_4116	-	3-dehydroquinate synthase
4070	 44.26	0	4658511..4659059	-	182	152998113	-	Mmwyl1_4117	-	shikimate kinase
4071	 43.06	0	4659102..4660283	-	393	152998114	-	Mmwyl1_4118	-	type II and III secretion system protein
4072	 41.35	0	4660276..4660986	-	236	152998115	-	Mmwyl1_4119	-	hypothetical protein
4073	 41.87	0	4660958..4661929	-	323	152998116	-	Mmwyl1_4120	-	hypothetical protein
4074	 44.46	0	4662090..4664534	+	814	152998117	-	Mmwyl1_4121	-	1A family penicillin-binding protein
4075	 43.67	0	4664626..4665186	-	186	152998118	-	Mmwyl1_4122	-	hypothetical protein
4076	 44.92	0	4665298..4666566	-	422	152998119	-	Mmwyl1_4123	-	malate dehydrogenase
4077	 42.53	0	4666737..4667519	-	260	152998120	-	Mmwyl1_4124	-	nuclease
4078	 41.67	0	4667528..4667743	-	71	152998121	-	Mmwyl1_4125	-	ribosomal protein L31
4079	 47.63	+1	4668009..4670240	+	743	152998122	-	Mmwyl1_4126	-	primosomal protein N'
4080	 45.19	0	4670317..4670940	+	207	152998123	-	Mmwyl1_4127	-	sporulation domain-containing protein
4081	 46.74	+1	4671060..4671611	+	183	152998124	-	Mmwyl1_4128	-	ATP-dependent protease peptidase subunit
4082	 45.50	0	4671698..4673020	+	440	152998125	-	Mmwyl1_4129	-	ATP-dependent protease ATP-binding subunit
4083	 45.83	0	4673076..4673459	+	127	152998126	-	Mmwyl1_4130	-	hypothetical protein
4084	 44.77	0	4673497..4674117	+	206	152998127	-	Mmwyl1_4131	-	hypothetical protein
4085	 42.76	0	4674139..4675008	-	289	152998128	-	Mmwyl1_4132	-	hypothetical protein
4086	 44.65	0	4675079..4676059	-	326	152998129	-	Mmwyl1_4133	-	asparaginase
4087	 45.16	0	4676173..4677906	-	577	152998130	-	Mmwyl1_4134	-	arginyl-tRNA synthetase
4088	 45.15	0	4678041..4679546	-	501	152998131	-	Mmwyl1_4135	-	threonine dehydratase, biosynthetic
4089	 43.90	0	4679844..4680515	+	223	152998132	-	Mmwyl1_4136	-	ribose 5-phosphate isomerase
4090	 44.79	0	4680544..4681512	-	322	152998133	-	Mmwyl1_4137	-	Mg2 transporter protein CorA family protein
4091	 44.79	0	4681660..4682619	+	319	152998134	-	Mmwyl1_4138	-	inositol phosphatase/fructose-16-bisphosphatase
4092	 45.06	0	4682721..4683317	-	198	152998135	-	Mmwyl1_4139	-	flavoprotein WrbA
4093	 45.05	0	4689278..4690054	-	258	152998136	-	Mmwyl1_4140	-	sugar fermentation stimulation protein
4094	 42.17	0	4690178..4691014	+	278	152998137	-	Mmwyl1_4141	-	helix-turn-helix domain-containing protein
4095	 45.60	0	4691061..4691696	+	211	152998138	-	Mmwyl1_4142	-	lysine exporter protein LysE/YggA
4096	 43.57	0	4691857..4692813	+	318	152998139	-	Mmwyl1_4143	-	LysR family transcriptional regulator
4097	 47.33	+1	4693131..4694345	+	404	152998140	-	Mmwyl1_4144	-	major facilitator transporter
4098	 39.76	0	4694835..4696001	+	388	152998141	-	Mmwyl1_4145	-	ATPase central domain-containing protein
4099	 41.55	0	4696001..4698190	+	729	152998142	-	Mmwyl1_4146	-	peptidase S8 and S53 subtilisin kexin sedolisin
4100	 47.02	+1	4698446..4700023	-	525	152998143	-	Mmwyl1_4147	-	bifunctional GMP synthase/glutamine amidotransferase protein
4101	 46.56	+1	4700152..4701618	-	488	152998144	-	Mmwyl1_4148	-	inosine-5'-monophosphate dehydrogenase
4102	 47.87	+1	4701712..4703052	+	446	152998145	-	Mmwyl1_4149	-	exodeoxyribonuclease VII, large subunit
4103	 45.45	0	4703335..4704630	+	431	152998146	-	Mmwyl1_4150	-	major facilitator transporter
4104	 46.74	+1	4704705..4705487	-	260	152998147	-	Mmwyl1_4151	-	hypothetical protein
4105	 48.08	+1	4705584..4706987	-	467	152998148	-	Mmwyl1_4152	-	hypothetical protein
4106	 46.33	0	4707095..4707994	+	299	152998149	-	Mmwyl1_4153	-	LysR family transcriptional regulator
4107	 42.20	0	4708059..4709987	-	642	152998150	-	Mmwyl1_4154	-	methyl-accepting chemotaxis sensory transducer
4108	 47.95	+1	4710146..4711513	-	455	152998151	-	Mmwyl1_4155	-	two component, sigma54 specific, Fis family transcriptional regulator
4109	 48.37	+1	4711500..4713401	-	633	152998152	-	Mmwyl1_4156	-	integral membrane sensor signal transduction histidine kinase
4110	 45.54	0	4713748..4715172	+	474	152998153	-	Mmwyl1_4157	-	cytochrome bd ubiquinol oxidase subunit I
4111	 46.35	0	4715169..4716182	+	337	152998154	-	Mmwyl1_4158	-	cytochrome d ubiquinol oxidase, subunit II
4112	 46.77	+1	4716417..4718366	-	649	152998155	-	Mmwyl1_4159	-	TRAP transporter, 4TM/12TM fusion protein
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.