IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3902	 42.49	0	4453325..4455301	-	658	152997945	-	Mmwyl1_3948	-	methyl-accepting chemotaxis sensory transducer
3903	 43.67	0	4455540..4456961	+	473	152997946	-	Mmwyl1_3949	-	GntR family transcriptional regulator
3904	 44.77	0	4457164..4457574	+	136	152997947	-	Mmwyl1_3950	-	TonB-like protein
3905	 43.80	0	4457611..4458126	+	171	152997948	-	Mmwyl1_3951	-	hypothetical protein
3906	 42.96	0	4458214..4458504	-	96	152997949	-	Mmwyl1_3952	-	hypothetical protein
3907	 44.24	0	4458596..4460080	-	494	152997950	-	Mmwyl1_3953	-	glycerol kinase
3908	 44.88	0	4460253..4461023	+	256	152997951	-	Mmwyl1_3954	-	DeoR family transcriptional regulator
3909	 44.09	0	4461219..4462706	+	495	152997952	-	Mmwyl1_3955	-	glycerol-3-phosphate dehydrogenase
3910	 43.84	0	4462828..4463598	+	256	152997953	-	Mmwyl1_3956	-	hypothetical protein
3911	 45.19	0	4463599..4464543	-	314	152997954	-	Mmwyl1_3957	-	LysR family transcriptional regulator
3912	 43.70	0	4465082..4466461	-	459	152997955	-	Mmwyl1_3958	-	glyceraldehyde-3-phosphate dehydrogenase
3913	 42.12	0	4466724..4467053	-	109	152997956	-	Mmwyl1_3959	-	hypothetical protein
3914	 41.00	0	4467088..4467648	-	186	152997957	-	Mmwyl1_3960	-	hypothetical protein
3915	 43.79	0	4467775..4468386	+	203	152997958	-	Mmwyl1_3961	-	phosphoribulokinase/uridine kinase
3916	 44.65	0	4468840..4470111	+	423	152997959	-	Mmwyl1_3962	-	Rieske (2Fe-2S) domain-containing protein
3917	 45.96	0	4470229..4471353	-	374	152997960	-	Mmwyl1_3963	-	chaperone protein DnaJ
3918	 43.68	0	4471517..4473430	-	637	152997961	-	Mmwyl1_3964	-	chaperone protein DnaK
3919	 44.39	0	4473533..4474111	-	192	152997962	-	Mmwyl1_3965	-	GrpE protein
3920	 45.00	0	4474299..4475969	+	556	152997963	-	Mmwyl1_3966	-	DNA repair protein RecN
3921	 43.55	0	4476065..4476475	-	136	152997964	-	Mmwyl1_3967	-	ferric uptake regulator family protein
3922	 38.99	-1	4476545..4476862	+	105	152997965	-	Mmwyl1_3968	-	SmpA/OmlA domain-containing protein
3923	 45.61	0	4476859..4477143	-	94	152997966	-	Mmwyl1_3969	-	hypothetical protein
3924	 41.20	0	4477145..4477576	-	143	152997967	-	Mmwyl1_3970	-	cyclase/dehydrase
3925	 42.31	0	4477578..4478936	-	452	152997968	-	Mmwyl1_3971	-	sodium:neurotransmitter symporter
3926	 47.08	+1	4479118..4479597	+	159	152997969	-	Mmwyl1_3972	-	SsrA-binding protein
3927	 30.79	-2	4480147..4480932	-	261	152997970	-	Mmwyl1_3973	-	hypothetical protein
3928	 34.21	-2	4481951..4482631	-	226	152997971	-	Mmwyl1_3975	-	hypothetical protein
3929	 44.25	0	4482687..4482860	-	57	152997972	-	Mmwyl1_3976	-	prophage MuMc02, S24 family peptidase
3930	 41.44	0	4482933..4483364	-	143	152997973	-	Mmwyl1_3977	-	hypothetical protein
3931	 44.37	0	4483504..4483956	-	150	152997974	-	Mmwyl1_3978	-	DNA binding domain-containing protein
3932	 39.51	-1	4484316..4484963	+	215	152997975	-	Mmwyl1_3979	-	hypothetical protein
3933	 43.46	0	4485235..4485846	+	203	152997976	-	Mmwyl1_3980	-	hypothetical protein
3934	 42.06	0	4486069..4487157	+	362	152997977	-	Mmwyl1_3981	-	methyl-accepting chemotaxis sensory transducer
3935	 43.98	0	4487545..4490343	+	932	152997978	-	Mmwyl1_3982	-	putative monovalent cation/H+ antiporter subunit A
3936	 48.91	+1	4490343..4490708	+	121	152997979	-	Mmwyl1_3983	-	putative monovalent cation/H+ antiporter subunit C
3937	 44.31	0	4490709..4492220	+	503	152997980	-	Mmwyl1_3984	-	putative monovalent cation/H+ antiporter subunit D
3938	 40.74	0	4492217..4492702	+	161	152997981	-	Mmwyl1_3985	-	cation antiporter
3939	 41.11	0	4492696..4492965	+	89	152997982	-	Mmwyl1_3986	-	putative monovalent cation/H+ antiporter subunit F
3940	 40.74	0	4492975..4493352	+	125	152997983	-	Mmwyl1_3987	-	monovalent cation/proton antiporter, MnhG/PhaG subunit
3941	 41.81	0	4493327..4496383	-	1018	152997984	-	Mmwyl1_3988	-	diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)
3942	 37.97	-1	4496648..4498675	-	675	152997985	-	Mmwyl1_3989	-	hypothetical protein
3943	 41.96	0	4499371..4500888	-	505	152997986	-	Mmwyl1_3990	-	Ppx/GppA phosphatase
3944	 42.02	0	4501421..4502686	+	421	152997987	-	Mmwyl1_3991	-	transcription termination factor Rho
3945	 42.11	0	4502820..4503548	+	242	152997988	-	Mmwyl1_3992	-	oxidoreductase FAD/NAD(P)-binding subunit
3946	 48.35	+1	4503648..4503920	-	90	152997989	-	Mmwyl1_3993	-	hypothetical protein
3947	 43.48	0	4504013..4505491	-	492	152997990	-	Mmwyl1_3994	-	malate:quinone oxidoreductase
3948	 42.79	0	4505906..4506307	+	133	152997991	-	Mmwyl1_3995	-	CBS domain-containing protein
3949	 42.81	0	4506326..4507201	-	291	152997992	-	Mmwyl1_3996	-	Hsp33 protein
3950	 44.50	0	4507446..4509371	+	641	152997993	-	Mmwyl1_3997	-	ABC transporter related
3951	 44.78	0	4509521..4510516	+	331	152997994	-	Mmwyl1_3998	-	delta-aminolevulinic acid dehydratase
3952	 44.05	0	4510662..4512881	+	739	152997995	-	Mmwyl1_3999	-	polyphosphate kinase
3953	 39.43	-1	4513079..4513816	+	245	152997996	-	Mmwyl1_4000	-	extracellular solute-binding protein
3954	 46.18	0	4520755..4524654	-	1299	152997997	-	Mmwyl1_4001	-	phosphoribosylformylglycinamidine synthase
3955	 44.99	0	4524772..4525260	-	162	152997998	-	Mmwyl1_4002	-	CMP/dCMP deaminase zinc-binding
3956	 39.01	-1	4525389..4525811	+	140	152997999	-	Mmwyl1_4003	-	CBS domain-containing protein
3957	 38.37	-1	4525813..4526070	-	85	152998000	-	Mmwyl1_4004	-	cold-shock DNA-binding domain-containing protein
3958	 44.83	0	4526164..4528947	-	927	152998001	-	Mmwyl1_4005	-	valyl-tRNA synthetase
3959	 39.78	0	4529079..4529528	-	149	152998002	-	Mmwyl1_4006	-	hypothetical protein
3960	 45.11	0	4529792..4531252	-	486	152998003	-	Mmwyl1_4007	-	leucyl aminopeptidase
3961	 42.11	0	4531509..4532624	+	371	152998004	-	Mmwyl1_4008	-	permease YjgP/YjgQ family protein
3962	 42.47	0	4532630..4533691	+	353	152998005	-	Mmwyl1_4009	-	permease YjgP/YjgQ family protein
3963	 45.76	0	4533751..4534917	-	388	152998006	-	Mmwyl1_4010	-	aminotransferase class I and II
3964	 42.30	0	4535086..4535520	+	144	152998007	-	Mmwyl1_4011	-	TraR/DksA family transcriptional regulator
3965	 43.89	0	4535553..4536452	+	299	152998008	-	Mmwyl1_4012	-	glutamate--tRNA ligase
3966	 44.73	0	4536578..4537981	+	467	152998009	-	Mmwyl1_4013	-	two component, sigma54 specific, Fis family transcriptional regulator
3967	 44.47	0	4538542..4539996	+	484	152998010	-	Mmwyl1_4014	-	poly(A) polymerase
3968	 44.51	0	4540011..4540493	+	160	152998011	-	Mmwyl1_4015	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
3969	 45.05	0	4540497..4541324	+	275	152998012	-	Mmwyl1_4016	-	3-methyl-2-oxobutanoate hydroxymethyltransferase
3970	 43.46	0	4541321..4542169	+	282	152998013	-	Mmwyl1_4017	-	pantoate--beta-alanine ligase
3971	 48.15	+1	4542193..4543839	+	548	152998014	-	Mmwyl1_4018	-	glucose-6-phosphate isomerase
3972	 34.05	-2	4544281..4545390	+	369	152998015	-	Mmwyl1_4019	-	hypothetical protein
3973	 42.13	0	4545555..4545770	+	71	152998016	-	Mmwyl1_4020	-	hypothetical protein
3974	 40.40	0	4545767..4546063	+	98	152998017	-	Mmwyl1_4021	-	plasmid stabilization system protein
3975	 40.78	0	4546092..4546346	-	84	152998018	-	Mmwyl1_4022	-	addiction module antitoxin
3976	 46.67	+1	4546343..4546597	-	84	152998019	-	Mmwyl1_4023	-	prevent-host-death family protein
3977	 44.80	0	4546692..4547162	-	156	152998020	-	Mmwyl1_4024	-	hypothetical protein
3978	 41.04	0	4547398..4548033	+	211	152998021	-	Mmwyl1_4025	-	hypothetical protein
3979	 44.90	0	4548046..4548849	-	267	152998022	-	Mmwyl1_4026	-	AraC family transcriptional regulator
3980	 43.18	0	4548940..4549203	+	87	152998023	-	Mmwyl1_4027	-	hypothetical protein
3981	 45.17	0	4549309..4550322	-	337	152998024	-	Mmwyl1_4028	-	lipoate-protein ligase A
3982	 39.30	-1	4550560..4552452	-	630	152998025	-	Mmwyl1_4029	-	methyl-accepting chemotaxis sensory transducer
3983	 45.11	0	4552928..4554532	+	534	152998026	-	Mmwyl1_4030	-	glucose-methanol-choline oxidoreductase
3984	 43.45	0	4554547..4556028	+	493	152998027	-	Mmwyl1_4031	-	aldehyde dehydrogenase
3985	 41.22	0	4556193..4557092	+	299	152998028	-	Mmwyl1_4032	-	DNA-binding transcriptional activator FeaR
3986	 42.35	0	4557208..4557684	-	158	152998029	-	Mmwyl1_4033	-	transcription elongation factor GreA
3987	 46.36	0	4557684..4560899	-	1071	152998030	-	Mmwyl1_4034	-	carbamoyl-phosphate synthase, large subunit
3988	 47.52	+1	4560923..4562113	-	396	152998031	-	Mmwyl1_4035	-	carbamoyl phosphate synthase small subunit
3989	 45.47	0	4562316..4562867	-	183	152998032	-	Mmwyl1_4036	-	DJ-1 family protein
3990	 42.06	0	4562907..4563410	-	167	152998033	-	Mmwyl1_4037	-	GCN5-related N-acetyltransferase
3991	 46.38	0	4563443..4564270	-	275	152998034	-	Mmwyl1_4038	-	hypothetical protein
3992	 43.98	0	4564451..4565239	+	262	152998035	-	Mmwyl1_4039	-	extracellular solute-binding protein
3993	 48.33	+1	4565350..4566156	+	268	152998036	-	Mmwyl1_4040	-	polar amino acid ABC transporter, inner membrane subunit
3994	 44.23	0	4566240..4568753	-	837	152998037	dddD	Mmwyl1_4041	-	L-carnitine dehydratase/bile acid-inducible protein F
3995	 44.15	0	4569267..4570847	+	526	152998038	dddT	Mmwyl1_4042	-	choline/carnitine/betaine transporter
3996	 46.51	+1	4570928..4572088	+	386	152998039	dddB	Mmwyl1_4043	-	iron-containing alcohol dehydrogenase
3997	 46.36	0	4572170..4573666	+	498	152998040	dddC	Mmwyl1_4044	-	methylmalonate-semialdehyde dehydrogenase
3998	 43.61	0	4573864..4574778	+	304	152998041	dddR	Mmwyl1_4045	-	LysR family transcriptional regulator
3999	 47.00	+1	4574858..4575340	-	160	152998042	-	Mmwyl1_4046	-	phosphatidylglycerophosphatase A
4000	 49.42	+1	4575406..4576356	-	316	152998043	-	Mmwyl1_4047	-	thiamine-monophosphate kinase
4001	 43.20	0	4576531..4576824	-	97	152998044	-	Mmwyl1_4048	-	hypothetical protein
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.