IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
347	 41.13	0	408801..409082	-	93	152994390	-	Mmwyl1_0352	-	hypothetical protein
348	 41.18	0	409075..409431	-	118	152994391	-	Mmwyl1_0353	-	hypothetical protein
349	 47.35	+1	409624..411171	-	515	152994392	-	Mmwyl1_0354	-	FAD-dependent pyridine nucleotide-disulphide oxidoreductase
350	 46.24	0	411264..411821	-	185	152994393	-	Mmwyl1_0355	-	alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
351	 42.75	0	411929..413011	-	360	152994394	-	Mmwyl1_0356	-	response regulator receiver modulated metal dependent phosphohydrolase
352	 40.02	0	413017..416949	-	1310	152994395	-	Mmwyl1_0357	-	multi-sensor hybrid histidine kinase
353	 40.57	0	416986..418146	-	386	152994396	-	Mmwyl1_0358	-	extracellular ligand-binding receptor
354	 44.81	0	418282..419205	-	307	152994397	-	Mmwyl1_0359	-	urea amidolyase related protein
355	 46.95	+1	419195..419899	-	234	152994398	-	Mmwyl1_0360	-	allophanate hydrolase subunit 1
356	 46.04	0	419903..420673	-	256	152994399	-	Mmwyl1_0361	-	hypothetical protein
357	 46.70	+1	420869..422140	+	423	152994400	-	Mmwyl1_0362	-	amidase
358	 41.58	0	422397..422978	+	193	152994401	-	Mmwyl1_0363	-	hypothetical protein
359	 46.12	0	423082..424317	+	411	152994402	-	Mmwyl1_0364	-	hypothetical protein
360	 43.96	0	424489..425034	-	181	152994403	-	Mmwyl1_0365	-	OmpA domain-containing protein
361	 42.78	0	425491..426570	-	359	152994404	-	Mmwyl1_0366	-	OmpA/MotB domain-containing protein
362	 45.93	0	426881..427777	-	298	152994405	-	Mmwyl1_0367	-	FAD-dependent pyridine nucleotide-disulphide oxidoreductase
363	 44.44	0	427913..428371	+	152	152994406	-	Mmwyl1_0368	-	BadM/Rrf2 family transcriptional regulator
364	 46.67	+1	428376..429065	+	229	152994407	-	Mmwyl1_0369	-	helix-turn-helix type 11 domain-containing protein
365	 44.62	0	429187..429576	+	129	152994408	-	Mmwyl1_0370	-	glyoxalase/bleomycin resistance protein/dioxygenase
366	 48.74	+1	429804..430595	+	263	152994409	-	Mmwyl1_0371	-	extradiol ring-cleavage dioxygenase class III protein subunit B
367	 43.75	0	430592..430927	-	111	152994410	-	Mmwyl1_0372	-	hypothetical protein
368	 45.12	0	431048..431929	-	293	152994411	-	Mmwyl1_0373	-	hypothetical protein
369	 43.58	0	432045..432698	-	217	152994412	-	Mmwyl1_0374	-	glutathione S-transferase domain-containing protein
370	 48.52	+1	433562..435286	-	574	152994413	-	Mmwyl1_0375	-	extracellular solute-binding protein
371	 49.08	+1	435391..435663	-	90	152994414	-	Mmwyl1_0376	-	hypothetical protein
372	 47.76	+1	435675..436568	-	297	152994415	-	Mmwyl1_0377	-	binding-protein-dependent transport systems inner membrane component
373	 47.36	+1	436578..437447	-	289	152994416	-	Mmwyl1_0378	-	binding-protein-dependent transport systems inner membrane component
374	 46.58	+1	437437..438591	-	384	152994417	-	Mmwyl1_0379	-	ABC transporter related
375	 48.85	+1	438594..439682	-	362	152994418	-	Mmwyl1_0380	-	ABC transporter related
376	 44.63	0	439998..441989	+	663	152994419	-	Mmwyl1_0381	-	Fis family GAF modulated sigma54 specific transcriptional regulator
377	 44.03	0	442044..442445	-	133	152994420	-	Mmwyl1_0382	-	endoribonuclease L-PSP
378	 39.08	-1	442545..443432	-	295	152994421	-	Mmwyl1_0383	-	LysR family transcriptional regulator
379	 42.99	0	443544..444071	+	175	152994422	-	Mmwyl1_0384	-	hypothetical protein
380	 35.75	-2	444238..444651	-	137	152994423	-	Mmwyl1_0385	-	hypothetical protein
381	 34.26	-2	444703..445350	-	215	152994424	-	Mmwyl1_0386	-	hypothetical protein
382	 42.26	0	445970..446944	+	324	152994425	-	Mmwyl1_0387	-	hypothetical protein
383	 45.41	0	447002..448069	+	355	152994426	-	Mmwyl1_0388	-	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
384	 45.09	0	448186..449112	-	308	152994427	-	Mmwyl1_0389	-	helix-turn-helix domain-containing protein
385	 42.84	0	449208..450164	+	318	152994428	-	Mmwyl1_0390	-	hypothetical protein
386	 46.57	+1	450300..451349	-	349	152994429	-	Mmwyl1_0391	-	peptidase M42 family protein
387	 38.91	-1	451432..452382	-	316	152994430	-	Mmwyl1_0392	-	helix-turn-helix domain-containing protein
388	 42.67	0	452529..454541	+	670	152994431	-	Mmwyl1_0393	-	TonB-dependent receptor
389	 41.38	0	454555..455598	+	347	152994432	-	Mmwyl1_0394	-	methyltransferase type 12
390	 43.28	0	455595..456830	+	411	152994433	-	Mmwyl1_0395	-	major facilitator transporter
391	 33.70	-2	456827..457102	+	91	152994434	-	Mmwyl1_0396	-	hypothetical protein
392	 40.03	0	457262..458575	+	437	152994435	-	Mmwyl1_0397	-	methyl-accepting chemotaxis sensory transducer
393	 46.65	+1	458664..459782	-	372	152994436	-	Mmwyl1_0398	-	radical SAM domain-containing protein
394	 43.04	0	459948..460709	+	253	152994437	-	Mmwyl1_0399	-	AraC family transcriptional regulator
395	 43.77	0	460733..462409	-	558	152994438	-	Mmwyl1_0400	-	2-isopropylmalate synthase
396	 39.06	-1	462751..463641	-	296	152994439	-	Mmwyl1_0401	-	hypothetical protein
397	 51.46	+2	463851..464909	-	352	152994440	-	Mmwyl1_0402	-	transport system permease protein
398	 45.93	0	464906..465889	-	327	152994441	-	Mmwyl1_0403	-	periplasmic binding protein
399	 46.24	0	465914..466765	-	283	152994442	-	Mmwyl1_0404	-	ABC transporter related
400	 44.54	0	467000..468016	-	338	152994443	-	Mmwyl1_0405	-	Fis family transcriptional regulator
401	 41.07	0	468233..468904	+	223	152994444	-	Mmwyl1_0406	-	phage shock protein A, PspA
402	 39.76	0	468948..469196	+	82	152994445	-	Mmwyl1_0407	-	phage shock protein B
403	 39.33	-1	469245..469694	+	149	152994446	-	Mmwyl1_0408	-	phage shock protein C, PspC
404	 43.42	0	469933..471042	+	369	152994447	-	Mmwyl1_0409	-	cytochrome-c peroxidase
405	 43.54	0	471112..472728	-	538	152994448	-	Mmwyl1_0410	-	methyl-accepting chemotaxis sensory transducer
406	 46.15	0	472958..473425	+	155	152994449	-	Mmwyl1_0411	-	OsmC family protein
407	 43.95	0	473473..474084	-	203	152994450	-	Mmwyl1_0412	-	glutathione S-transferase domain-containing protein
408	 47.08	+1	474152..475060	+	302	152994451	-	Mmwyl1_0413	-	LysR family transcriptional regulator
409	 45.88	0	475064..475342	-	92	152994452	-	Mmwyl1_0414	-	antibiotic biosynthesis monooxygenase
410	 42.72	0	475345..475866	-	173	152994453	-	Mmwyl1_0415	-	GCN5-related N-acetyltransferase
411	 45.58	0	475863..476801	-	312	152994454	-	Mmwyl1_0416	-	hypothetical protein
412	 44.81	0	476959..477420	+	153	152994455	-	Mmwyl1_0417	-	AsnC family transcriptional regulator
413	 45.53	0	477443..478861	-	472	152994456	-	Mmwyl1_0418	-	integral membrane sensor signal transduction histidine kinase
414	 45.65	0	478791..479480	-	229	152994457	-	Mmwyl1_0419	-	two component transcriptional regulator
415	 39.90	0	479603..480211	-	202	152994458	-	Mmwyl1_0420	-	hypothetical protein
416	 44.59	0	480418..480870	+	150	152994459	-	Mmwyl1_0421	-	MarR family transcriptional regulator
417	 44.92	0	481008..481430	+	140	152994460	-	Mmwyl1_0422	-	OsmC family protein
418	 40.45	0	481579..481887	+	102	152994461	-	Mmwyl1_0423	-	transcriptional coactivator/pterin dehydratase
419	 41.23	0	481933..482565	-	210	152994462	-	Mmwyl1_0424	-	hypothetical protein
420	 48.28	+1	482799..483815	+	338	152994463	-	Mmwyl1_0425	-	dienelactone hydrolase
421	 44.57	0	483812..484861	-	349	152994464	-	Mmwyl1_0426	-	helix-turn-helix domain-containing protein
422	 40.96	0	485082..485435	+	117	152994465	-	Mmwyl1_0427	-	hypothetical protein
423	 41.67	0	485449..486024	+	191	152994466	-	Mmwyl1_0428	-	hypothetical protein
424	 42.49	0	486007..486858	-	283	152994467	-	Mmwyl1_0429	-	LysR family transcriptional regulator
425	 42.46	0	487021..487743	+	240	152994468	-	Mmwyl1_0430	-	HPP family protein?
426	 43.43	0	487785..488180	+	131	152994469	-	Mmwyl1_0431	-	glyoxalase/bleomycin resistance protein/dioxygenase
427	 38.26	-1	488491..488916	+	141	152994470	-	Mmwyl1_0432	-	GCN5-related N-acetyltransferase
428	 32.77	-2	489051..489584	+	177	152994471	-	Mmwyl1_0433	-	adenylate kinase
429	 42.25	0	490104..490619	+	171	152994472	-	Mmwyl1_0435	-	hypothetical protein
430	 40.28	0	490616..491047	+	143	152994473	-	Mmwyl1_0436	-	GCN5-related N-acetyltransferase
431	 41.56	0	491074..491547	+	157	152994474	-	Mmwyl1_0437	-	GCN5-related N-acetyltransferase
432	 49.04	+1	491712..492443	-	243	152994475	-	Mmwyl1_0438	-	hypothetical protein
433	 44.25	0	492497..493339	-	280	152994476	-	Mmwyl1_0439	-	extracellular solute-binding protein
434	 44.97	0	493386..494906	-	506	152994477	-	Mmwyl1_0440	-	polar amino acid ABC transporter, inner membrane subunit
435	 44.91	0	495328..496251	+	307	152994478	-	Mmwyl1_0441	-	LysR family transcriptional regulator
436	 47.62	+1	496415..497674	+	419	152994479	-	Mmwyl1_0442	-	flavin-containing monooxygenase FMO
437	 46.67	+1	497688..498107	+	139	152994480	-	Mmwyl1_0443	-	endoribonuclease L-PSP
438	 49.93	+2	498119..498793	+	224	152994481	-	Mmwyl1_0444	-	hypothetical protein
439	 48.42	+1	498786..499958	+	390	152994482	-	Mmwyl1_0445	-	acetylornithine deacetylase
440	 48.01	+1	500034..500762	-	242	152994483	-	Mmwyl1_0446	-	ABC transporter related
441	 44.24	0	500749..501399	-	216	152994484	-	Mmwyl1_0447	-	polar amino acid ABC transporter, inner membrane subunit
442	 44.34	0	501432..502094	-	220	152994485	-	Mmwyl1_0448	-	polar amino acid ABC transporter, inner membrane subunit
443	 44.19	0	502105..502896	-	263	152994486	-	Mmwyl1_0449	-	extracellular solute-binding protein
444	 47.99	+1	503256..504074	+	272	152994487	-	Mmwyl1_0450	-	RpiR family transcriptional regulator
445	 46.44	+1	504223..505458	+	411	152994488	-	Mmwyl1_0451	-	amidase
446	 48.40	+1	505455..507107	+	550	152994489	-	Mmwyl1_0452	-	gamma-glutamyltransferase
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.