IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3820	 39.43	-1	4363208..4365175	+	655	152997863	-	Mmwyl1_3864	-	diguanylate cyclase/phosphodiesterase
3821	 41.34	0	4365477..4366625	+	382	152997864	-	Mmwyl1_3865	-	GTPase EngC
3822	 45.68	0	4366659..4367468	-	269	152997865	-	Mmwyl1_3866	-	hypothetical protein
3823	 44.83	0	4367773..4368633	-	286	152997866	-	Mmwyl1_3867	-	putative glutathione S-transferase YghU
3824	 42.47	0	4368679..4369455	-	258	152997867	-	Mmwyl1_3868	-	oxidoreductase FAD/NAD(P)-binding subunit
3825	 42.42	0	4369926..4370552	+	208	152997868	-	Mmwyl1_3869	-	peptide methionine sulfoxide reductase
3826	 41.75	0	4370823..4371392	+	189	152997869	-	Mmwyl1_3870	-	OmpA domain-containing protein
3827	 34.22	-2	4371459..4372136	-	225	152997870	-	Mmwyl1_3871	-	4'-phosphopantetheinyl transferase
3828	 36.20	-2	4372311..4372763	-	150	152997871	-	Mmwyl1_3872	-	excinuclease ATPase subunit
3829	 40.17	0	4373121..4373837	+	238	152997872	-	Mmwyl1_3873	-	hypothetical protein
3830	 37.37	-1	4373844..4374611	+	255	152997873	-	Mmwyl1_3874	-	phospholipid/glycerol acyltransferase
3831	 36.36	-1	4374604..4374867	+	87	152997874	-	Mmwyl1_3875	-	acyl carrier protein, putative
3832	 35.74	-2	4374877..4375125	+	82	152997875	-	Mmwyl1_3876	-	phosphopantetheine-binding
3833	 36.80	-1	4375159..4375677	+	172	152997876	-	Mmwyl1_3877	-	hypothetical protein
3834	 39.93	0	4375674..4377371	+	565	152997877	-	Mmwyl1_3878	-	AMP-dependent synthetase and ligase
3835	 38.73	-1	4379099..4379506	+	135	152997878	-	Mmwyl1_3880	-	4-hydroxybenzoyl-CoA thioesterase domain-containing protein
3836	 35.28	-2	4379503..4380066	+	187	152997879	-	Mmwyl1_3881	-	hypothetical protein
3837	 40.45	0	4380063..4382381	+	772	152997880	-	Mmwyl1_3882	-	hypothetical protein
3838	 38.62	-1	4382382..4383611	+	409	152997881	-	Mmwyl1_3883	-	monooxygenase FAD-binding
3839	 38.38	-1	4383599..4384153	+	184	152997882	-	Mmwyl1_3884	-	hypothetical protein
3840	 43.31	0	4384174..4385316	+	380	152997883	-	Mmwyl1_3885	-	Beta-ketoacyl synthase
3841	 39.22	-1	4385316..4385774	+	152	152997884	-	Mmwyl1_3886	-	hypothetical protein
3842	 42.56	0	4385767..4386492	+	241	152997885	-	Mmwyl1_3887	-	3-ketoacyl-(acyl-carrier-protein) reductase
3843	 43.09	0	4386492..4387721	+	409	152997886	-	Mmwyl1_3888	-	Beta-ketoacyl synthase
3844	 43.64	0	4387949..4388695	+	248	152997887	-	Mmwyl1_3889	-	nitroreductase
3845	 42.48	0	4388738..4389262	+	174	152997888	-	Mmwyl1_3890	-	peroxiredoxin
3846	 46.80	+1	4389356..4390588	-	410	152997889	-	Mmwyl1_3891	-	FAD dependent oxidoreductase
3847	 41.82	0	4390747..4391229	-	160	152997890	-	Mmwyl1_3892	-	heat shock protein Hsp20
3848	 44.86	0	4391419..4392381	-	320	152997891	-	Mmwyl1_3893	-	LysR family transcriptional regulator
3849	 44.14	0	4392558..4393214	+	218	152997892	-	Mmwyl1_3894	-	nitroreductase
3850	 37.92	-1	4393375..4394442	-	355	152997893	-	Mmwyl1_3895	-	diguanylate cyclase
3851	 41.90	0	4395144..4395680	-	178	152997894	-	Mmwyl1_3897	-	hypothetical protein
3852	 45.70	0	4395758..4396048	-	96	152997895	-	Mmwyl1_3898	-	helix-turn-helix domain-containing protein
3853	 41.91	0	4396257..4397072	-	271	152997896	-	Mmwyl1_3899	-	N-formylglutamate amidohydrolase
3854	 48.40	+1	4397086..4398306	-	406	152997897	-	Mmwyl1_3900	-	imidazolonepropionase
3855	 47.59	+1	4398369..4399904	-	511	152997898	-	Mmwyl1_3901	-	histidine ammonia-lyase
3856	 47.93	+1	4400057..4401748	-	563	152997899	-	Mmwyl1_3902	-	urocanate hydratase
3857	 45.82	0	4402051..4403451	+	466	152997900	-	Mmwyl1_3903	-	N-formimino-L-glutamate deiminase
3858	 43.41	0	4403441..4404055	+	204	152997901	-	Mmwyl1_3904	-	hypothetical protein
3859	 43.88	0	4404052..4404819	-	255	152997902	-	Mmwyl1_3905	-	GntR family transcriptional regulator
3860	 41.21	0	4404906..4405565	-	219	152997903	-	Mmwyl1_3906	-	cytochrome B561
3861	 40.41	0	4405754..4406785	+	343	152997904	-	Mmwyl1_3907	-	hypothetical protein
3862	 45.31	0	4407147..4408448	+	433	152997905	-	Mmwyl1_3908	-	proline dipeptidase
3863	 42.80	0	4408747..4409739	+	330	152997906	-	Mmwyl1_3909	-	hypothetical protein
3864	 40.50	0	4409823..4410338	+	171	152997907	-	Mmwyl1_3910	-	hypothetical protein
3865	 43.47	0	4410346..4411845	+	499	152997908	-	Mmwyl1_3911	-	hypothetical protein
3866	 44.35	0	4412253..4414394	+	713	152997909	-	Mmwyl1_3912	-	methyl-accepting chemotaxis sensory transducer
3867	 44.23	0	4414519..4416372	-	617	152997910	-	Mmwyl1_3913	-	xylose isomerase domain-containing protein
3868	 44.31	0	4416704..4417669	+	321	152997911	-	Mmwyl1_3914	-	LysR family transcriptional regulator
3869	 43.31	0	4417692..4418633	+	313	152997912	-	Mmwyl1_3915	-	auxin efflux carrier
3870	 44.59	0	4418659..4419111	-	150	152997913	-	Mmwyl1_3916	-	3-dehydroquinate dehydratase
3871	 42.02	0	4419167..4420099	-	310	152997914	-	Mmwyl1_3917	-	auxin efflux carrier
3872	 42.94	0	4420189..4420896	-	235	152997915	-	Mmwyl1_3918	-	regulatory protein GntR HTH
3873	 44.83	0	4421061..4421930	-	289	152997916	-	Mmwyl1_3919	-	shikimate dehydrogenase substrate binding subunit
3874	 43.70	0	4422210..4423058	-	282	152997917	-	Mmwyl1_3920	-	protocatechuate 4,5-dioxygenase subunit beta
3875	 39.94	0	4423058..4423405	-	115	152997918	-	Mmwyl1_3921	-	protocatechuate 4,5-dioxygenase subunit alpha
3876	 46.09	0	4423661..4424875	+	404	152997919	-	Mmwyl1_3922	-	LysR family transcriptional regulator
3877	 47.15	+1	4425027..4425974	+	315	152997920	-	Mmwyl1_3923	-	oxidoreductase domain-containing protein
3878	 45.67	0	4426102..4427082	+	326	152997921	-	Mmwyl1_3924	-	aldo/keto reductase
3879	 46.88	+1	4427192..4429000	-	602	152997922	-	Mmwyl1_3925	-	pyruvate carboxylase subunit B
3880	 47.10	+1	4429019..4430434	-	471	152997923	-	Mmwyl1_3926	-	acetyl-CoA carboxylase
3881	 44.16	0	4430621..4431571	+	316	152997924	-	Mmwyl1_3927	-	LysR family transcriptional regulator
3882	 40.38	0	4431848..4433152	+	434	152997925	-	Mmwyl1_3928	-	methyl-accepting chemotaxis sensory transducer
3883	 40.57	0	4433297..4434595	+	432	152997926	-	Mmwyl1_3929	-	methyl-accepting chemotaxis sensory transducer
3884	 39.91	0	4434671..4435522	-	283	152997927	-	Mmwyl1_3930	-	LysR family transcriptional regulator
3885	 41.23	0	4435667..4436629	+	320	152997928	-	Mmwyl1_3931	-	hypothetical protein
3886	 38.04	-1	4436695..4437204	+	169	152997929	-	Mmwyl1_3932	-	hypothetical protein
3887	 42.56	0	4437227..4438744	+	505	152997930	-	Mmwyl1_3933	-	hypothetical protein
3888	 39.32	-1	4438775..4439359	+	194	152997931	-	Mmwyl1_3934	-	hypothetical protein
3889	 40.54	0	4439365..4440945	+	526	152997932	-	Mmwyl1_3935	-	rhodanese domain-containing protein
3890	 42.33	0	4440957..4442123	+	388	152997933	-	Mmwyl1_3936	-	cystathionine beta-lyase
3891	 36.00	-2	4442352..4444073	+	573	152997934	-	Mmwyl1_3937	-	sulfate transporter
3892	 44.64	0	4444171..4445019	-	282	152997935	-	Mmwyl1_3938	-	protocatechuate 4,5-dioxygenase subunit beta
3893	 40.77	0	4445019..4445381	-	120	152997936	-	Mmwyl1_3939	-	protocatechuate 4,5-dioxygenase subunit alpha
3894	 45.36	0	4445423..4446295	-	290	152997937	-	Mmwyl1_3940	-	amidohydrolase 2
3895	 49.40	+1	4446377..4447465	-	362	152997938	-	Mmwyl1_3941	-	hypothetical protein
3896	 46.76	+1	4447458..4448135	-	225	152997939	-	Mmwyl1_3942	-	hypothetical protein
3897	 43.06	0	4448165..4449172	-	335	152997940	-	Mmwyl1_3943	-	amidohydrolase 2
3898	 44.48	0	4449835..4450848	+	337	152997941	-	Mmwyl1_3944	-	TRAP dicarboxylate transporter, DctP subunit
3899	 41.77	0	4450934..4451407	+	157	152997942	-	Mmwyl1_3945	-	tripartite ATP-independent periplasmic transporter DctQ
3900	 44.37	0	4451410..4452678	+	422	152997943	-	Mmwyl1_3946	-	TRAP dicarboxylate transporter, DctM subunit
3901	 44.38	0	4452783..4453262	-	159	152997944	-	Mmwyl1_3947	-	redoxin domain-containing protein
3902	 42.49	0	4453325..4455301	-	658	152997945	-	Mmwyl1_3948	-	methyl-accepting chemotaxis sensory transducer
3903	 43.67	0	4455540..4456961	+	473	152997946	-	Mmwyl1_3949	-	GntR family transcriptional regulator
3904	 44.77	0	4457164..4457574	+	136	152997947	-	Mmwyl1_3950	-	TonB-like protein
3905	 43.80	0	4457611..4458126	+	171	152997948	-	Mmwyl1_3951	-	hypothetical protein
3906	 42.96	0	4458214..4458504	-	96	152997949	-	Mmwyl1_3952	-	hypothetical protein
3907	 44.24	0	4458596..4460080	-	494	152997950	-	Mmwyl1_3953	-	glycerol kinase
3908	 44.88	0	4460253..4461023	+	256	152997951	-	Mmwyl1_3954	-	DeoR family transcriptional regulator
3909	 44.09	0	4461219..4462706	+	495	152997952	-	Mmwyl1_3955	-	glycerol-3-phosphate dehydrogenase
3910	 43.84	0	4462828..4463598	+	256	152997953	-	Mmwyl1_3956	-	hypothetical protein
3911	 45.19	0	4463599..4464543	-	314	152997954	-	Mmwyl1_3957	-	LysR family transcriptional regulator
3912	 43.70	0	4465082..4466461	-	459	152997955	-	Mmwyl1_3958	-	glyceraldehyde-3-phosphate dehydrogenase
3913	 42.12	0	4466724..4467053	-	109	152997956	-	Mmwyl1_3959	-	hypothetical protein
3914	 41.00	0	4467088..4467648	-	186	152997957	-	Mmwyl1_3960	-	hypothetical protein
3915	 43.79	0	4467775..4468386	+	203	152997958	-	Mmwyl1_3961	-	phosphoribulokinase/uridine kinase
3916	 44.65	0	4468840..4470111	+	423	152997959	-	Mmwyl1_3962	-	Rieske (2Fe-2S) domain-containing protein
3917	 45.96	0	4470229..4471353	-	374	152997960	-	Mmwyl1_3963	-	chaperone protein DnaJ
3918	 43.68	0	4471517..4473430	-	637	152997961	-	Mmwyl1_3964	-	chaperone protein DnaK
3919	 44.39	0	4473533..4474111	-	192	152997962	-	Mmwyl1_3965	-	GrpE protein
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.