IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3783	 48.52	+1	4314591..4316078	-	495	152997826	-	Mmwyl1_3827	-	amidase
3784	 44.74	0	4316505..4317188	+	227	152997827	-	Mmwyl1_3828	-	hypothetical protein
3785	 46.69	+1	4317188..4318684	+	498	152997828	-	Mmwyl1_3829	-	AMP-dependent synthetase and ligase
3786	 44.05	0	4318681..4319352	+	223	152997829	-	Mmwyl1_3830	-	TenA family transcriptional activator
3787	 44.88	0	4319360..4320199	+	279	152997830	-	Mmwyl1_3831	-	short-chain dehydrogenase/reductase SDR
3788	 45.44	0	4320196..4320831	+	211	152997831	-	Mmwyl1_3832	-	TPR repeat-containing protein
3789	 45.17	0	4320932..4322080	-	382	152997832	-	Mmwyl1_3833	-	NAD(P) transhydrogenase subunit alpha
3790	 44.09	0	4322393..4323907	-	504	152997833	-	Mmwyl1_3834	-	malonyl-CoA synthase
3791	 42.87	0	4323910..4325157	-	415	152997834	-	Mmwyl1_3835	-	malonyl-CoA decarboxylase
3792	 40.64	0	4325433..4326554	+	373	152997835	-	Mmwyl1_3836	-	hypothetical protein
3793	 39.07	-1	4326551..4327909	-	452	152997836	-	Mmwyl1_3837	-	diguanylate cyclase
3794	 38.85	-1	4327951..4329309	-	452	152997837	-	Mmwyl1_3838	-	diguanylate cyclase
3795	 38.10	-1	4329619..4331127	+	502	152997838	-	Mmwyl1_3839	-	5'-nucleotidase domain-containing protein
3796	 37.16	-1	4331130..4332800	+	556	152997839	-	Mmwyl1_3840	-	diguanylate cyclase
3797	 42.94	0	4332860..4334056	-	398	152997840	-	Mmwyl1_3841	-	sugar efflux transporter
3798	 41.33	0	4334339..4335952	+	537	152997841	-	Mmwyl1_3842	-	methyl-accepting chemotaxis sensory transducer
3799	 41.50	0	4336161..4337384	+	407	152997842	-	Mmwyl1_3843	-	diguanylate cyclase with PAS/PAC sensor
3800	 43.77	0	4337503..4338546	+	347	152997843	-	Mmwyl1_3844	-	extracellular solute-binding protein
3801	 45.97	0	4338587..4339480	-	297	152997844	-	Mmwyl1_3845	-	DNA-binding transcriptional regulator IlvY
3802	 44.53	0	4339702..4341174	+	490	152997845	-	Mmwyl1_3846	-	ketol-acid reductoisomerase
3803	 48.11	+1	4341280..4342707	+	475	152997846	-	Mmwyl1_3847	-	ABC transporter related
3804	 39.60	-1	4342858..4345635	+	925	152997847	-	Mmwyl1_3848	-	KAP P-loop domain-containing protein
3805	 41.99	0	4345655..4345966	-	103	152997848	-	Mmwyl1_3849	-	addiction module antitoxin
3806	 46.59	+1	4345929..4346177	-	82	152997849	-	Mmwyl1_3850	-	prevent-host-death family protein
3807	 41.04	0	4346230..4346748	-	172	152997850	-	Mmwyl1_3851	-	hypothetical protein
3808	 40.76	0	4346788..4347972	-	394	152997851	-	Mmwyl1_3852	-	abortive infection protein
3809	 47.62	+1	4348254..4351424	+	1056	152997852	-	Mmwyl1_3853	-	isoleucyl-tRNA synthetase
3810	 46.75	+1	4351549..4353054	-	501	152997853	-	Mmwyl1_3854	-	hypothetical protein
3811	 43.71	0	4353042..4353494	-	150	152997854	-	Mmwyl1_3855	-	putative tricarboxylic transport membrane protein
3812	 46.29	0	4353491..4354486	-	331	152997855	-	Mmwyl1_3856	-	hypothetical protein
3813	 43.83	0	4354532..4355665	-	377	152997856	-	Mmwyl1_3857	-	CitB domain-containing protein
3814	 51.09	+2	4355708..4357132	-	474	152997857	-	Mmwyl1_3858	-	tricarballylate dehydrogenase
3815	 44.12	0	4357274..4358200	-	308	152997858	-	Mmwyl1_3859	-	LysR family transcriptional regulator
3816	 43.46	0	4358575..4359285	+	236	152997859	-	Mmwyl1_3860	-	acid phosphatase/phosphotransferase
3817	 43.11	0	4359356..4360408	-	350	152997860	-	Mmwyl1_3861	-	hypothetical protein
3818	 41.76	0	4360570..4361376	-	268	152997861	-	Mmwyl1_3862	-	hypothetical protein
3819	 41.45	0	4361363..4362643	-	426	152997862	-	Mmwyl1_3863	-	diguanylate cyclase
3820	 39.43	-1	4363208..4365175	+	655	152997863	-	Mmwyl1_3864	-	diguanylate cyclase/phosphodiesterase
3821	 41.34	0	4365477..4366625	+	382	152997864	-	Mmwyl1_3865	-	GTPase EngC
3822	 45.68	0	4366659..4367468	-	269	152997865	-	Mmwyl1_3866	-	hypothetical protein
3823	 44.83	0	4367773..4368633	-	286	152997866	-	Mmwyl1_3867	-	putative glutathione S-transferase YghU
3824	 42.47	0	4368679..4369455	-	258	152997867	-	Mmwyl1_3868	-	oxidoreductase FAD/NAD(P)-binding subunit
3825	 42.42	0	4369926..4370552	+	208	152997868	-	Mmwyl1_3869	-	peptide methionine sulfoxide reductase
3826	 41.75	0	4370823..4371392	+	189	152997869	-	Mmwyl1_3870	-	OmpA domain-containing protein
3827	 34.22	-2	4371459..4372136	-	225	152997870	-	Mmwyl1_3871	-	4'-phosphopantetheinyl transferase
3828	 36.20	-2	4372311..4372763	-	150	152997871	-	Mmwyl1_3872	-	excinuclease ATPase subunit
3829	 40.17	0	4373121..4373837	+	238	152997872	-	Mmwyl1_3873	-	hypothetical protein
3830	 37.37	-1	4373844..4374611	+	255	152997873	-	Mmwyl1_3874	-	phospholipid/glycerol acyltransferase
3831	 36.36	-1	4374604..4374867	+	87	152997874	-	Mmwyl1_3875	-	acyl carrier protein, putative
3832	 35.74	-2	4374877..4375125	+	82	152997875	-	Mmwyl1_3876	-	phosphopantetheine-binding
3833	 36.80	-1	4375159..4375677	+	172	152997876	-	Mmwyl1_3877	-	hypothetical protein
3834	 39.93	0	4375674..4377371	+	565	152997877	-	Mmwyl1_3878	-	AMP-dependent synthetase and ligase
3835	 38.73	-1	4379099..4379506	+	135	152997878	-	Mmwyl1_3880	-	4-hydroxybenzoyl-CoA thioesterase domain-containing protein
3836	 35.28	-2	4379503..4380066	+	187	152997879	-	Mmwyl1_3881	-	hypothetical protein
3837	 40.45	0	4380063..4382381	+	772	152997880	-	Mmwyl1_3882	-	hypothetical protein
3838	 38.62	-1	4382382..4383611	+	409	152997881	-	Mmwyl1_3883	-	monooxygenase FAD-binding
3839	 38.38	-1	4383599..4384153	+	184	152997882	-	Mmwyl1_3884	-	hypothetical protein
3840	 43.31	0	4384174..4385316	+	380	152997883	-	Mmwyl1_3885	-	Beta-ketoacyl synthase
3841	 39.22	-1	4385316..4385774	+	152	152997884	-	Mmwyl1_3886	-	hypothetical protein
3842	 42.56	0	4385767..4386492	+	241	152997885	-	Mmwyl1_3887	-	3-ketoacyl-(acyl-carrier-protein) reductase
3843	 43.09	0	4386492..4387721	+	409	152997886	-	Mmwyl1_3888	-	Beta-ketoacyl synthase
3844	 43.64	0	4387949..4388695	+	248	152997887	-	Mmwyl1_3889	-	nitroreductase
3845	 42.48	0	4388738..4389262	+	174	152997888	-	Mmwyl1_3890	-	peroxiredoxin
3846	 46.80	+1	4389356..4390588	-	410	152997889	-	Mmwyl1_3891	-	FAD dependent oxidoreductase
3847	 41.82	0	4390747..4391229	-	160	152997890	-	Mmwyl1_3892	-	heat shock protein Hsp20
3848	 44.86	0	4391419..4392381	-	320	152997891	-	Mmwyl1_3893	-	LysR family transcriptional regulator
3849	 44.14	0	4392558..4393214	+	218	152997892	-	Mmwyl1_3894	-	nitroreductase
3850	 37.92	-1	4393375..4394442	-	355	152997893	-	Mmwyl1_3895	-	diguanylate cyclase
3851	 41.90	0	4395144..4395680	-	178	152997894	-	Mmwyl1_3897	-	hypothetical protein
3852	 45.70	0	4395758..4396048	-	96	152997895	-	Mmwyl1_3898	-	helix-turn-helix domain-containing protein
3853	 41.91	0	4396257..4397072	-	271	152997896	-	Mmwyl1_3899	-	N-formylglutamate amidohydrolase
3854	 48.40	+1	4397086..4398306	-	406	152997897	-	Mmwyl1_3900	-	imidazolonepropionase
3855	 47.59	+1	4398369..4399904	-	511	152997898	-	Mmwyl1_3901	-	histidine ammonia-lyase
3856	 47.93	+1	4400057..4401748	-	563	152997899	-	Mmwyl1_3902	-	urocanate hydratase
3857	 45.82	0	4402051..4403451	+	466	152997900	-	Mmwyl1_3903	-	N-formimino-L-glutamate deiminase
3858	 43.41	0	4403441..4404055	+	204	152997901	-	Mmwyl1_3904	-	hypothetical protein
3859	 43.88	0	4404052..4404819	-	255	152997902	-	Mmwyl1_3905	-	GntR family transcriptional regulator
3860	 41.21	0	4404906..4405565	-	219	152997903	-	Mmwyl1_3906	-	cytochrome B561
3861	 40.41	0	4405754..4406785	+	343	152997904	-	Mmwyl1_3907	-	hypothetical protein
3862	 45.31	0	4407147..4408448	+	433	152997905	-	Mmwyl1_3908	-	proline dipeptidase
3863	 42.80	0	4408747..4409739	+	330	152997906	-	Mmwyl1_3909	-	hypothetical protein
3864	 40.50	0	4409823..4410338	+	171	152997907	-	Mmwyl1_3910	-	hypothetical protein
3865	 43.47	0	4410346..4411845	+	499	152997908	-	Mmwyl1_3911	-	hypothetical protein
3866	 44.35	0	4412253..4414394	+	713	152997909	-	Mmwyl1_3912	-	methyl-accepting chemotaxis sensory transducer
3867	 44.23	0	4414519..4416372	-	617	152997910	-	Mmwyl1_3913	-	xylose isomerase domain-containing protein
3868	 44.31	0	4416704..4417669	+	321	152997911	-	Mmwyl1_3914	-	LysR family transcriptional regulator
3869	 43.31	0	4417692..4418633	+	313	152997912	-	Mmwyl1_3915	-	auxin efflux carrier
3870	 44.59	0	4418659..4419111	-	150	152997913	-	Mmwyl1_3916	-	3-dehydroquinate dehydratase
3871	 42.02	0	4419167..4420099	-	310	152997914	-	Mmwyl1_3917	-	auxin efflux carrier
3872	 42.94	0	4420189..4420896	-	235	152997915	-	Mmwyl1_3918	-	regulatory protein GntR HTH
3873	 44.83	0	4421061..4421930	-	289	152997916	-	Mmwyl1_3919	-	shikimate dehydrogenase substrate binding subunit
3874	 43.70	0	4422210..4423058	-	282	152997917	-	Mmwyl1_3920	-	protocatechuate 4,5-dioxygenase subunit beta
3875	 39.94	0	4423058..4423405	-	115	152997918	-	Mmwyl1_3921	-	protocatechuate 4,5-dioxygenase subunit alpha
3876	 46.09	0	4423661..4424875	+	404	152997919	-	Mmwyl1_3922	-	LysR family transcriptional regulator
3877	 47.15	+1	4425027..4425974	+	315	152997920	-	Mmwyl1_3923	-	oxidoreductase domain-containing protein
3878	 45.67	0	4426102..4427082	+	326	152997921	-	Mmwyl1_3924	-	aldo/keto reductase
3879	 46.88	+1	4427192..4429000	-	602	152997922	-	Mmwyl1_3925	-	pyruvate carboxylase subunit B
3880	 47.10	+1	4429019..4430434	-	471	152997923	-	Mmwyl1_3926	-	acetyl-CoA carboxylase
3881	 44.16	0	4430621..4431571	+	316	152997924	-	Mmwyl1_3927	-	LysR family transcriptional regulator
3882	 40.38	0	4431848..4433152	+	434	152997925	-	Mmwyl1_3928	-	methyl-accepting chemotaxis sensory transducer
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.