IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3456	 38.99	-1	3942801..3943667	+	288	152997499	-	Mmwyl1_3496	-	lysozyme subfamily protein
3457	 43.56	0	3943818..3945734	+	638	152997500	-	Mmwyl1_3497	-	Beta-ketoacyl synthase
3458	 39.91	0	3945769..3946665	-	298	152997501	-	Mmwyl1_3498	-	LysR family transcriptional regulator
3459	 42.04	0	3946804..3947343	+	179	152997502	-	Mmwyl1_3499	-	YceI family protein
3460	 41.41	0	3947377..3948255	+	292	152997503	-	Mmwyl1_3500	-	hypothetical protein
3461	 38.61	-1	3948265..3948681	-	138	152997504	-	Mmwyl1_3501	-	hypothetical protein
3462	 39.48	-1	3948727..3949605	-	292	152997505	-	Mmwyl1_3502	-	dTDP-4-dehydrorhamnose reductase
3463	 42.05	0	3949602..3950381	-	259	152997506	-	Mmwyl1_3503	-	TatD-related deoxyribonuclease
3464	 44.32	0	3950489..3952045	-	518	152997507	-	Mmwyl1_3504	-	phosphoenolpyruvate carboxykinase
3465	 46.13	0	3952552..3954075	+	507	152997508	-	Mmwyl1_3505	-	6-phosphogluconate dehydrogenase, decarboxylating
3466	 42.74	0	3954220..3954942	-	240	152997509	-	Mmwyl1_3506	-	RNA methyltransferase
3467	 45.63	0	3955265..3956053	+	262	152997510	-	Mmwyl1_3507	-	inositol monophosphatase
3468	 42.82	0	3956144..3957208	-	354	152997511	-	Mmwyl1_3508	-	oxidoreductase domain-containing protein
3469	 44.29	0	3957457..3958113	-	218	152997512	-	Mmwyl1_3509	-	hypothetical protein
3470	 37.95	-1	3958156..3958935	-	259	152997513	-	Mmwyl1_3510	-	sterol desaturase
3471	 38.93	-1	3958994..3959386	-	130	152997514	-	Mmwyl1_3511	-	hypothetical protein
3472	 42.16	0	3959461..3960615	-	384	152997515	-	Mmwyl1_3512	-	aminotransferase class I and II
3473	 42.86	0	3960942..3961529	+	195	152997516	-	Mmwyl1_3513	-	TetR family transcriptional regulator
3474	 45.19	0	3961677..3962612	+	311	152997517	-	Mmwyl1_3514	-	substrate-binding region of ABC-type glycine betaine transport system
3475	 43.50	0	3962691..3963536	+	281	152997518	-	Mmwyl1_3515	-	binding-protein-dependent transport systems inner membrane component
3476	 46.21	0	3963540..3964727	+	395	152997519	-	Mmwyl1_3516	-	ABC transporter related
3477	 45.81	0	3964827..3966164	-	445	152997520	-	Mmwyl1_3517	-	glutamate--putrescine ligase
3478	 47.57	+1	3966393..3967670	+	425	152997521	-	Mmwyl1_3518	-	FAD dependent oxidoreductase
3479	 43.60	0	3967710..3968420	-	236	152997522	-	Mmwyl1_3519	-	glutamine amidotransferase class-I
3480	 45.05	0	3968456..3969274	-	272	152997523	-	Mmwyl1_3520	-	ornithine carbamoyltransferase
3481	 43.77	0	3969271..3970161	-	296	152997524	-	Mmwyl1_3521	-	binding-protein-dependent transport systems inner membrane component
3482	 45.71	0	3970158..3971312	-	384	152997525	-	Mmwyl1_3522	-	spermidine/putrescine ABC transporter ATPase subunit
3483	 43.00	0	3971379..3972464	-	361	152997526	-	Mmwyl1_3523	-	extracellular solute-binding protein
3484	 46.59	+1	3972531..3973865	-	444	152997527	-	Mmwyl1_3524	-	glutamate--putrescine ligase
3485	 42.42	0	3974227..3975051	+	274	152997528	-	Mmwyl1_3525	-	response regulator receiver protein
3486	 44.31	0	3975075..3976358	-	427	152997529	-	Mmwyl1_3526	-	FAD dependent oxidoreductase
3487	 47.04	+1	3976404..3977891	-	495	152997530	-	Mmwyl1_3527	-	aldehyde dehydrogenase
3488	 45.45	0	3978221..3979507	+	428	152997531	-	Mmwyl1_3528	-	major facilitator transporter
3489	 45.65	0	3979581..3980189	-	202	152997532	-	Mmwyl1_3529	-	lysine exporter protein LysE/YggA
3490	 43.69	0	3980289..3981167	+	292	152997533	-	Mmwyl1_3530	-	LysR family transcriptional regulator
3491	 43.85	0	3981254..3982090	+	278	152997534	-	Mmwyl1_3531	-	UTP-glucose-1-phosphate uridylyltransferase
3492	 44.17	0	3982197..3983165	-	322	152997535	-	Mmwyl1_3532	-	monosaccharide-transporting ATPase
3493	 46.08	0	3983162..3984220	-	352	152997536	-	Mmwyl1_3533	-	monosaccharide-transporting ATPase
3494	 45.61	0	3984283..3985854	-	523	152997537	-	Mmwyl1_3534	-	ABC transporter related
3495	 45.09	0	3985939..3986925	-	328	152997538	-	Mmwyl1_3535	-	periplasmic binding protein/LacI transcriptional regulator
3496	 47.57	+1	3987166..3988113	-	315	152997539	-	Mmwyl1_3536	-	auxin efflux carrier
3497	 49.19	+1	3988267..3989187	-	306	152997540	-	Mmwyl1_3537	-	LysR family transcriptional regulator
3498	 49.21	+1	3989321..3990019	+	232	152997541	-	Mmwyl1_3538	-	pirin domain-containing protein
3499	 42.50	0	3990139..3990945	-	268	152997542	-	Mmwyl1_3539	-	FAD-binding 9 siderophore-interacting domain-containing protein
3500	 45.02	0	3998079..3998369	-	96	152997543	-	Mmwyl1_3540	-	CRISPR-associated Cas2 family protein
3501	 44.48	0	3998372..3999295	-	307	152997544	-	Mmwyl1_3541	-	CRISPR-associated Cas1 family protein
3502	 42.30	0	3999295..4000119	-	274	152997545	-	Mmwyl1_3542	-	hypothetical protein
3503	 42.22	0	4000177..4000851	-	224	152997546	-	Mmwyl1_3543	-	CRISPR-associated Cse3 family protein
3504	 47.23	+1	4000852..4001628	-	258	152997547	-	Mmwyl1_3544	-	CRISPR-associated Cas5 family protein
3505	 44.83	0	4001641..4002675	-	344	152997548	-	Mmwyl1_3545	-	CRISPR-associated Cse4 family protein
3506	 41.22	0	4002693..4003313	-	206	152997549	-	Mmwyl1_3546	-	CRISPR-associated Cse2 family protein
3507	 44.11	0	4003313..4004917	-	534	152997550	-	Mmwyl1_3547	-	CRISPR-associated Cse1 family protein
3508	 42.76	0	4005542..4008268	-	908	152997551	-	Mmwyl1_3548	-	CRISPR-associated helicase Cas3
3509	 46.86	+1	4009467..4010294	-	275	152997552	-	Mmwyl1_3550	-	hypothetical protein
3510	 44.58	0	4010419..4011681	-	420	152997553	-	Mmwyl1_3551	-	hypothetical protein
3511	 44.03	0	4011783..4012979	+	398	152997554	-	Mmwyl1_3552	-	aromatic amino acid aminotransferase
3512	 43.58	0	4013127..4013741	-	204	152997555	-	Mmwyl1_3553	-	yecA family protein
3513	 44.18	0	4013808..4015706	-	632	152997556	-	Mmwyl1_3554	-	DNA topoisomerase IV subunit B
3514	 41.77	0	4015839..4016336	-	165	152997557	-	Mmwyl1_3555	-	hypothetical protein
3515	 41.41	0	4016470..4016952	-	160	152997558	-	Mmwyl1_3556	-	hypothetical protein
3516	 40.57	0	4016949..4017929	-	326	152997559	-	Mmwyl1_3557	-	phospholipid/glycerol acyltransferase
3517	 42.19	0	4017934..4018554	-	206	152997560	-	Mmwyl1_3558	-	NUDIX hydrolase
3518	 39.36	-1	4018681..4019244	+	187	152997561	-	Mmwyl1_3559	-	DNA-3-methyladenine glycosylase I
3519	 44.18	0	4019388..4020383	+	331	152997562	-	Mmwyl1_3560	-	polysaccharide biosynthesis protein CapD
3520	 43.77	0	4020370..4021557	+	395	152997563	-	Mmwyl1_3561	-	DegT/DnrJ/EryC1/StrS aminotransferase
3521	 44.54	0	4021561..4022283	+	240	152997564	-	Mmwyl1_3562	-	acylneuraminate cytidylyltransferase
3522	 43.89	0	4022258..4023271	-	337	152997565	-	Mmwyl1_3563	-	spore coat polysaccharide biosynthesis protein glycosyltransferase-like protein
3523	 46.80	+1	4023268..4024299	-	343	152997566	-	Mmwyl1_3564	-	N-acylneuraminate-9-phosphate synthase
3524	 40.26	0	4024302..4026410	-	702	152997567	-	Mmwyl1_3565	-	hypothetical protein
3525	 32.99	-2	4026400..4026693	-	97	152997568	-	Mmwyl1_3566	-	hypothetical protein
3526	 41.61	0	4026693..4027127	-	144	152997569	-	Mmwyl1_3567	-	flagellar protein FliS
3527	 39.06	-1	4027169..4028809	-	546	152997570	-	Mmwyl1_3568	-	flagellar hook-associated 2 domain-containing protein
3528	 38.30	-1	4028843..4029265	-	140	152997571	-	Mmwyl1_3569	-	flagellar protein FlaG protein
3529	 43.05	0	4029330..4030214	-	294	152997572	-	Mmwyl1_3570	-	flagellin domain-containing protein
3530	 41.47	0	4032190..4033074	-	294	152997573	-	Mmwyl1_3571	-	flagellin domain-containing protein
3531	 38.68	-1	4033491..4035041	-	516	152997574	-	Mmwyl1_3572	-	metal dependent phosphohydrolase
3532	 39.59	-1	4035064..4036374	-	436	152997575	-	Mmwyl1_3573	-	flagellar hook-associated protein 3
3533	 39.86	0	4036379..4038355	-	658	152997576	-	Mmwyl1_3574	-	flagellar hook-associated protein FlgK
3534	 43.97	0	4038465..4039451	-	328	152997577	-	Mmwyl1_3575	-	flagellar rod assembly protein/muramidase FlgJ
3535	 45.64	0	4039460..4040548	-	362	152997578	-	Mmwyl1_3576	-	flagellar P-ring protein
3536	 43.78	0	4040598..4041449	-	283	152997579	-	Mmwyl1_3577	-	flagellar L-ring protein
3537	 43.13	0	4041463..4042248	-	261	152997580	-	Mmwyl1_3578	-	flagellar basal-body rod protein FlgG
3538	 43.55	0	4042311..4043054	-	247	152997581	-	Mmwyl1_3579	-	flagellar basal-body rod protein FlgF
3539	 42.52	0	4043195..4044892	-	565	152997582	-	Mmwyl1_3580	-	hypothetical protein
3540	 43.55	0	4044905..4045609	-	234	152997583	-	Mmwyl1_3581	-	flagellar hook capping protein
3541	 42.54	0	4045620..4046075	-	151	152997584	-	Mmwyl1_3582	-	flagellar basal-body rod protein FlgC
3542	 39.19	-1	4046075..4046467	-	130	152997585	-	Mmwyl1_3583	-	flagellar basal-body rod protein FlgB
3543	 41.59	0	4046731..4047057	-	108	152997586	-	Mmwyl1_3584	-	thioredoxin
3544	 44.96	0	4047162..4047875	-	237	152997587	-	Mmwyl1_3585	-	HAD family hydrolase
3545	 40.99	0	4047872..4048537	-	221	152997588	-	Mmwyl1_3586	-	hypothetical protein
3546	 43.08	0	4048545..4049375	-	276	152997589	-	Mmwyl1_3587	-	diaminopimelate epimerase
3547	 43.46	0	4049386..4050639	-	417	152997590	-	Mmwyl1_3588	-	diaminopimelate decarboxylase
3548	 39.00	-1	4050998..4051879	+	293	152997591	-	Mmwyl1_3589	-	hypothetical protein
3549	 44.61	0	4051966..4053366	-	466	152997592	-	Mmwyl1_3590	-	argininosuccinate lyase
3550	 44.04	0	4053472..4054452	+	326	152997593	-	Mmwyl1_3591	-	porphobilinogen deaminase
3551	 43.56	0	4054504..4055256	+	250	152997594	-	Mmwyl1_3592	-	uroporphyrinogen III synthase HEM4
3552	 39.68	-1	4055258..4056565	+	435	152997595	-	Mmwyl1_3593	-	protein of unknown function DUF513 hemX
3553	 40.89	0	4056562..4057791	+	409	152997596	-	Mmwyl1_3594	-	HemY domain-containing protein
3554	 43.02	0	4057904..4059451	-	515	152997597	-	Mmwyl1_3595	-	methyl-accepting chemotaxis sensory transducer
3555	 38.05	-1	4059537..4060448	-	303	152997598	-	Mmwyl1_3596	-	hypothetical protein
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.