IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3337	 48.16	+1	3821881..3822669	-	262	152997380	-	Mmwyl1_3377	-	precorrin-6A reductase
3338	 50.74	+2	3822666..3823820	-	384	152997381	-	Mmwyl1_3378	-	cobalt-precorrin-6A synthase
3339	 49.92	+2	3823825..3825156	-	443	152997382	-	Mmwyl1_3379	-	cobyrinic acid ac-diamide synthase
3340	 48.35	+1	3825177..3826961	-	594	152997383	-	Mmwyl1_3380	-	magnesium chelatase
3341	 41.38	0	3827134..3829842	-	902	152997384	-	Mmwyl1_3381	-	PAS/PAC sensor hybrid histidine kinase
3342	 40.28	0	3829921..3831705	-	594	152997385	-	Mmwyl1_3382	-	response regulator receiver modulated diguanylate cyclase/phosphodiesterase
3343	 41.63	0	3832062..3832664	-	200	152997386	-	Mmwyl1_3383	-	hypothetical protein
3344	 43.92	0	3832930..3833817	+	295	152997387	-	Mmwyl1_3384	-	LysR family transcriptional regulator
3345	 41.96	0	3833932..3834882	+	316	152997388	-	Mmwyl1_3385	-	LysR family transcriptional regulator
3346	 41.28	0	3834909..3835298	+	129	152997389	-	Mmwyl1_3386	-	glyoxalase/bleomycin resistance protein/dioxygenase
3347	 40.87	0	3835430..3836053	-	207	152997390	-	Mmwyl1_3387	-	alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
3348	 39.39	-1	3836125..3836454	-	109	152997391	-	Mmwyl1_3388	-	glutaredoxin-like protein
3349	 44.70	0	3836698..3837603	+	301	152997392	-	Mmwyl1_3389	-	ornithine carbamoyltransferase
3350	 43.37	0	3837692..3838618	+	308	152997393	-	Mmwyl1_3390	-	LysR family transcriptional regulator
3351	 39.44	-1	3838844..3840301	-	485	152997394	-	Mmwyl1_3391	-	histidine kinase
3352	 41.94	0	3840365..3841084	-	239	152997395	-	Mmwyl1_3392	-	two component transcriptional regulator
3353	 39.69	0	3841149..3841604	-	151	152997396	-	Mmwyl1_3393	-	hypothetical protein
3354	 43.30	0	3841634..3842536	-	300	152997397	-	Mmwyl1_3394	-	RNA-binding S4 domain-containing protein
3355	 42.18	0	3842652..3843284	-	210	152997398	-	Mmwyl1_3395	-	Sua5/YciO/YrdC/YwlC family protein
3356	 42.96	0	3843345..3844196	-	283	152997399	-	Mmwyl1_3396	-	phosphotransferase domain-containing protein
3357	 33.89	-2	3844280..3844816	+	178	152997400	-	Mmwyl1_3397	-	intracellular septation protein A
3358	 47.39	+1	3844819..3845124	+	101	152997401	-	Mmwyl1_3398	-	YCII-related
3359	 40.43	0	3845214..3845495	-	93	152997402	-	Mmwyl1_3399	-	putative selenoprotein
3360	 45.65	0	3845587..3846138	+	183	152997403	-	Mmwyl1_3400	-	peptidyl-prolyl cis-trans isomerase cyclophilin type
3361	 43.46	0	3846128..3848152	+	674	152997404	-	Mmwyl1_3401	-	hypothetical protein
3362	 35.76	-2	3848248..3848577	-	109	152997405	-	Mmwyl1_3402	-	hypothetical protein
3363	 44.69	0	3848695..3849513	+	272	152997406	-	Mmwyl1_3403	-	serine O-acetyltransferase
3364	 39.24	-1	3849537..3849773	-	78	152997407	-	Mmwyl1_3404	-	hypothetical protein
3365	 44.43	0	3849774..3851792	-	672	152997408	-	Mmwyl1_3405	-	DNA ligase, NAD-dependent
3366	 43.25	0	3851894..3852922	-	342	152997409	-	Mmwyl1_3406	-	cell division protein ZipA
3367	 40.98	0	3852988..3854151	-	387	152997410	-	Mmwyl1_3407	-	TPR repeat-containing protein
3368	 39.90	0	3854178..3854588	-	136	152997411	-	Mmwyl1_3408	-	cytochrome C biogenesis protein
3369	 40.78	0	3854585..3855094	-	169	152997412	-	Mmwyl1_3409	-	periplasmic protein thiol--disulphide oxidoreductase DsbE
3370	 46.13	0	3855097..3857034	-	645	152997413	-	Mmwyl1_3410	-	cytochrome c-type biogenesis protein CcmF
3371	 44.44	0	3857047..3857514	-	155	152997414	-	Mmwyl1_3411	-	CcmE/CycJ protein
3372	 42.37	0	3857514..3857690	-	58	152997415	-	Mmwyl1_3412	-	Heme exporter protein D (CcmD)
3373	 44.85	0	3857680..3858426	-	248	152997416	-	Mmwyl1_3413	-	heme exporter protein CcmC
3374	 40.03	0	3858426..3859067	-	213	152997417	-	Mmwyl1_3414	-	cytochrome c-type biogenesis protein CcmB
3375	 42.76	0	3859085..3859699	-	204	152997418	-	Mmwyl1_3415	-	heme exporter protein CcmA
3376	 42.05	0	3859860..3861476	+	538	152997419	-	Mmwyl1_3416	-	hypothetical protein
3377	 43.78	0	3861476..3861724	+	82	152997420	-	Mmwyl1_3417	-	hypothetical protein
3378	 40.74	0	3861715..3862119	-	134	152997421	-	Mmwyl1_3418	-	hypothetical protein
3379	 39.43	-1	3862134..3862625	-	163	152997422	-	Mmwyl1_3419	-	putative CheW protein
3380	 45.17	0	3862662..3863624	-	320	152997423	-	Mmwyl1_3420	-	CheW domain-containing protein
3381	 44.06	0	3863634..3864407	-	257	152997424	-	Mmwyl1_3421	-	cobyrinic acid ac-diamide synthase
3382	 41.27	0	3864477..3865295	-	272	152997425	-	Mmwyl1_3422	-	OmpA/MotB domain-containing protein
3383	 39.97	0	3865288..3866025	-	245	152997426	-	Mmwyl1_3423	-	MotA/TolQ/ExbB proton channel
3384	 44.23	0	3866025..3867089	-	354	152997427	-	Mmwyl1_3424	-	chemotaxis-specific methylesterase
3385	 42.45	0	3867116..3869353	-	745	152997428	-	Mmwyl1_3425	-	CheA signal transduction histidine kinase
3386	 40.81	0	3869366..3870154	-	262	152997429	-	Mmwyl1_3426	-	chemotaxis phosphatase, CheZ
3387	 39.90	0	3870164..3870544	-	126	152997430	-	Mmwyl1_3427	-	response regulator receiver protein
3388	 38.89	-1	3870599..3871336	-	245	152997431	-	Mmwyl1_3428	-	RNA polymerase, sigma 28 subunit, FliA/WhiG
3389	 41.28	0	3871433..3872716	-	427	152997432	-	Mmwyl1_3429	-	GTP-binding signal recognition particle
3390	 43.91	0	3872818..3874935	-	705	152997433	-	Mmwyl1_3430	-	flagellar biosynthesis protein FlhA
3391	 43.36	0	3874973..3876109	-	378	152997434	-	Mmwyl1_3431	-	flagellar biosynthetic protein FlhB
3392	 40.36	0	3876102..3876884	-	260	152997435	-	Mmwyl1_3432	-	flagellar biosynthetic protein FliR
3393	 37.41	-1	3876884..3877153	-	89	152997436	-	Mmwyl1_3433	-	flagellar biosynthetic protein FliQ
3394	 42.01	0	3877156..3877893	-	245	152997437	-	Mmwyl1_3434	-	flagellar biosynthesis protein FliP
3395	 41.93	0	3877890..3878273	-	127	152997438	-	Mmwyl1_3435	-	flagellar biosynthesis protein FliO
3396	 46.54	+1	3878319..3878780	-	153	152997439	-	Mmwyl1_3436	-	flagellar motor switch protein FliN
3397	 42.26	0	3878782..3879756	-	324	152997440	-	Mmwyl1_3437	-	flagellar motor switch protein FliM
3398	 41.13	0	3879761..3880273	-	170	152997441	-	Mmwyl1_3438	-	flagellar basal body-associated protein FliL
3399	 45.72	0	3880391..3882094	-	567	152997442	-	Mmwyl1_3439	-	flagellar hook-length control protein
3400	 38.92	-1	3882142..3883860	-	572	152997443	-	Mmwyl1_3440	-	response regulator receiver protein
3401	 36.96	-1	3883867..3884169	-	100	152997444	-	Mmwyl1_3441	-	anti-sigma-factor antagonist
3402	 39.65	-1	3884200..3886098	-	632	152997445	-	Mmwyl1_3442	-	hypothetical protein
3403	 38.82	-1	3886119..3887996	-	625	152997446	-	Mmwyl1_3443	-	hypothetical protein
3404	 43.45	0	3888048..3888482	-	144	152997447	-	Mmwyl1_3444	-	flagellar export protein FliJ
3405	 45.72	0	3888536..3889867	-	443	152997448	-	Mmwyl1_3445	-	flagellar protein export ATPase FliI
3406	 43.37	0	3889873..3890679	-	268	152997449	-	Mmwyl1_3446	-	flagellar assembly protein FliH
3407	 43.79	0	3890687..3891700	-	337	152997450	-	Mmwyl1_3447	-	flagellar motor switch protein G
3408	 42.70	0	3891697..3893373	-	558	152997451	-	Mmwyl1_3448	-	flagellar MS-ring protein
3409	 46.83	+1	3893401..3893763	-	120	152997452	-	Mmwyl1_3449	-	flagellar hook-basal body complex subunit FliE
3410	 42.02	0	3893852..3895198	-	448	152997453	-	Mmwyl1_3450	-	two component, sigma54 specific, Fis family transcriptional regulator
3411	 42.42	0	3895200..3896354	-	384	152997454	-	Mmwyl1_3451	-	PAS/PAC sensor signal transduction histidine kinase
3412	 39.28	-1	3896354..3896824	-	156	152997455	-	Mmwyl1_3452	-	Fis family transcriptional regulator
3413	 44.54	0	3896931..3897608	-	225	152997456	-	Mmwyl1_3453	-	dethiobiotin synthase
3414	 41.45	0	3897617..3898429	-	270	152997457	-	Mmwyl1_3454	-	methyltransferase type 11
3415	 44.40	0	3898413..3899216	-	267	152997458	-	Mmwyl1_3455	-	carboxylesterase
3416	 45.54	0	3899229..3900440	-	403	152997459	-	Mmwyl1_3456	-	8-amino-7-oxononanoate synthase
3417	 42.92	0	3900424..3901518	-	364	152997460	-	Mmwyl1_3457	-	biotin synthase
3418	 41.83	0	3901557..3902309	+	250	152997461	-	Mmwyl1_3458	-	K+-dependent Na+/Ca+ exchanger related-protein
3419	 43.98	0	3902381..3903667	+	428	152997462	-	Mmwyl1_3459	-	adenosylmethionine-8-amino-7-oxononanoate aminotransferase
3420	 42.03	0	3903935..3905497	-	520	152997463	-	Mmwyl1_3460	-	methyl-accepting chemotaxis sensory transducer
3421	 43.43	0	3905590..3906966	-	458	152997464	-	Mmwyl1_3461	-	replicative DNA helicase
3422	 43.92	0	3907109..3907552	-	147	152997465	-	Mmwyl1_3462	-	ribosomal protein L9
3423	 41.35	0	3907575..3908435	-	286	152997466	-	Mmwyl1_3463	-	hypothetical protein
3424	 43.72	0	3908457..3908687	-	76	152997467	-	Mmwyl1_3464	-	ribosomal protein S18
3425	 43.21	0	3908711..3909115	-	134	152997468	-	Mmwyl1_3465	-	ribosomal protein S6
3426	 40.27	0	3909373..3910107	+	244	152997469	-	Mmwyl1_3466	-	MltA-interacting MipA family protein
3427	 40.36	0	3910165..3911061	+	298	152997470	-	Mmwyl1_3467	-	hypothetical protein
3428	 42.51	0	3911071..3911964	+	297	152997471	-	Mmwyl1_3468	-	hypothetical protein
3429	 43.48	0	3911966..3912832	-	288	152997472	-	Mmwyl1_3469	-	hypothetical protein
3430	 42.44	0	3912877..3913623	-	248	152997473	-	Mmwyl1_3470	-	ABC transporter related
3431	 43.66	0	3913610..3915139	-	509	152997474	-	Mmwyl1_3471	-	thiamine ABC transporter, inner membrane subunit
3432	 44.48	0	3915217..3916230	-	337	152997475	-	Mmwyl1_3472	-	thiamine ABC transporter, periplasmic binding protein
3433	 44.99	0	3916452..3917678	-	408	152997476	-	Mmwyl1_3473	-	3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein
3434	 40.31	0	3917681..3919471	-	596	152997477	-	Mmwyl1_3474	-	lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
3435	 42.23	0	3919472..3920899	-	475	152997478	-	Mmwyl1_3475	-	rfaE bifunctional protein
3436	 39.86	0	3920996..3922144	+	382	152997479	-	Mmwyl1_3476	-	N-acylglucosamine 2-epimerase
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.