IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3314	 40.14	0	3798881..3799453	-	190	152997357	-	Mmwyl1_3353	-	TetR family transcriptional regulator
3315	 39.38	-1	3799541..3800086	+	181	152997358	-	Mmwyl1_3354	-	deaminase-reductase domain-containing protein
3316	 43.70	0	3800107..3801312	-	401	152997359	-	Mmwyl1_3355	-	hypothetical protein
3317	 41.05	0	3801795..3802766	-	323	152997360	-	Mmwyl1_3356	-	hypothetical protein
3318	 38.38	-1	3803115..3803510	-	131	152997361	-	Mmwyl1_3357	-	hypothetical protein
3319	 44.50	0	3803510..3804655	-	381	152997362	-	Mmwyl1_3358	-	hypothetical protein
3320	 35.69	-2	3804800..3805096	-	98	152997363	-	Mmwyl1_3359	-	hypothetical protein
3321	 41.50	0	3806016..3807044	-	342	152997364	-	Mmwyl1_3360	-	hypothetical protein
3322	 39.29	-1	3807165..3807500	-	111	152997365	-	Mmwyl1_3361	-	hypothetical protein
3323	 39.79	0	3807502..3807888	-	128	152997366	-	Mmwyl1_3362	-	hypothetical protein
3324	 44.94	0	3808189..3808998	-	269	152997367	-	Mmwyl1_3363	-	integrase catalytic region
3325	 46.08	0	3809043..3809348	-	101	152997368	-	Mmwyl1_3364	-	transposase IS3/IS911 family protein
3326	 42.70	0	3809582..3809848	+	88	152997369	-	Mmwyl1_3365	-	hypothetical protein
3327	 40.52	0	3810564..3811022	-	152	152997370	-	Mmwyl1_3367	-	hypothetical protein
3328	 37.62	-1	3811402..3812613	-	403	152997371	-	Mmwyl1_3368	-	hypothetical protein
3329	 32.78	-2	3812613..3813338	-	241	152997372	-	Mmwyl1_3369	-	hypothetical protein
3330	 34.84	-2	3813325..3814584	-	419	152997373	-	Mmwyl1_3370	-	hypothetical protein
3331	 36.74	-1	3814987..3815808	-	273	152997374	-	Mmwyl1_3371	-	hypothetical protein
3332	 42.08	0	3815990..3818047	-	685	152997375	-	Mmwyl1_3372	-	Sel1 domain-containing protein
3333	 47.49	+1	3818278..3819054	-	258	152997376	-	Mmwyl1_3373	-	cobalamin biosynthesis protein CbiG
3334	 48.85	+1	3819051..3819791	-	246	152997377	-	Mmwyl1_3374	-	precorrin-2 C20-methyltransferase
3335	 48.07	+1	3819788..3821158	-	456	152997378	-	Mmwyl1_3375	-	precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
3336	 50.75	+2	3821219..3821884	-	221	152997379	-	Mmwyl1_3376	-	precorrin-8X methylmutase
3337	 48.16	+1	3821881..3822669	-	262	152997380	-	Mmwyl1_3377	-	precorrin-6A reductase
3338	 50.74	+2	3822666..3823820	-	384	152997381	-	Mmwyl1_3378	-	cobalt-precorrin-6A synthase
3339	 49.92	+2	3823825..3825156	-	443	152997382	-	Mmwyl1_3379	-	cobyrinic acid ac-diamide synthase
3340	 48.35	+1	3825177..3826961	-	594	152997383	-	Mmwyl1_3380	-	magnesium chelatase
3341	 41.38	0	3827134..3829842	-	902	152997384	-	Mmwyl1_3381	-	PAS/PAC sensor hybrid histidine kinase
3342	 40.28	0	3829921..3831705	-	594	152997385	-	Mmwyl1_3382	-	response regulator receiver modulated diguanylate cyclase/phosphodiesterase
3343	 41.63	0	3832062..3832664	-	200	152997386	-	Mmwyl1_3383	-	hypothetical protein
3344	 43.92	0	3832930..3833817	+	295	152997387	-	Mmwyl1_3384	-	LysR family transcriptional regulator
3345	 41.96	0	3833932..3834882	+	316	152997388	-	Mmwyl1_3385	-	LysR family transcriptional regulator
3346	 41.28	0	3834909..3835298	+	129	152997389	-	Mmwyl1_3386	-	glyoxalase/bleomycin resistance protein/dioxygenase
3347	 40.87	0	3835430..3836053	-	207	152997390	-	Mmwyl1_3387	-	alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
3348	 39.39	-1	3836125..3836454	-	109	152997391	-	Mmwyl1_3388	-	glutaredoxin-like protein
3349	 44.70	0	3836698..3837603	+	301	152997392	-	Mmwyl1_3389	-	ornithine carbamoyltransferase
3350	 43.37	0	3837692..3838618	+	308	152997393	-	Mmwyl1_3390	-	LysR family transcriptional regulator
3351	 39.44	-1	3838844..3840301	-	485	152997394	-	Mmwyl1_3391	-	histidine kinase
3352	 41.94	0	3840365..3841084	-	239	152997395	-	Mmwyl1_3392	-	two component transcriptional regulator
3353	 39.69	0	3841149..3841604	-	151	152997396	-	Mmwyl1_3393	-	hypothetical protein
3354	 43.30	0	3841634..3842536	-	300	152997397	-	Mmwyl1_3394	-	RNA-binding S4 domain-containing protein
3355	 42.18	0	3842652..3843284	-	210	152997398	-	Mmwyl1_3395	-	Sua5/YciO/YrdC/YwlC family protein
3356	 42.96	0	3843345..3844196	-	283	152997399	-	Mmwyl1_3396	-	phosphotransferase domain-containing protein
3357	 33.89	-2	3844280..3844816	+	178	152997400	-	Mmwyl1_3397	-	intracellular septation protein A
3358	 47.39	+1	3844819..3845124	+	101	152997401	-	Mmwyl1_3398	-	YCII-related
3359	 40.43	0	3845214..3845495	-	93	152997402	-	Mmwyl1_3399	-	putative selenoprotein
3360	 45.65	0	3845587..3846138	+	183	152997403	-	Mmwyl1_3400	-	peptidyl-prolyl cis-trans isomerase cyclophilin type
3361	 43.46	0	3846128..3848152	+	674	152997404	-	Mmwyl1_3401	-	hypothetical protein
3362	 35.76	-2	3848248..3848577	-	109	152997405	-	Mmwyl1_3402	-	hypothetical protein
3363	 44.69	0	3848695..3849513	+	272	152997406	-	Mmwyl1_3403	-	serine O-acetyltransferase
3364	 39.24	-1	3849537..3849773	-	78	152997407	-	Mmwyl1_3404	-	hypothetical protein
3365	 44.43	0	3849774..3851792	-	672	152997408	-	Mmwyl1_3405	-	DNA ligase, NAD-dependent
3366	 43.25	0	3851894..3852922	-	342	152997409	-	Mmwyl1_3406	-	cell division protein ZipA
3367	 40.98	0	3852988..3854151	-	387	152997410	-	Mmwyl1_3407	-	TPR repeat-containing protein
3368	 39.90	0	3854178..3854588	-	136	152997411	-	Mmwyl1_3408	-	cytochrome C biogenesis protein
3369	 40.78	0	3854585..3855094	-	169	152997412	-	Mmwyl1_3409	-	periplasmic protein thiol--disulphide oxidoreductase DsbE
3370	 46.13	0	3855097..3857034	-	645	152997413	-	Mmwyl1_3410	-	cytochrome c-type biogenesis protein CcmF
3371	 44.44	0	3857047..3857514	-	155	152997414	-	Mmwyl1_3411	-	CcmE/CycJ protein
3372	 42.37	0	3857514..3857690	-	58	152997415	-	Mmwyl1_3412	-	Heme exporter protein D (CcmD)
3373	 44.85	0	3857680..3858426	-	248	152997416	-	Mmwyl1_3413	-	heme exporter protein CcmC
3374	 40.03	0	3858426..3859067	-	213	152997417	-	Mmwyl1_3414	-	cytochrome c-type biogenesis protein CcmB
3375	 42.76	0	3859085..3859699	-	204	152997418	-	Mmwyl1_3415	-	heme exporter protein CcmA
3376	 42.05	0	3859860..3861476	+	538	152997419	-	Mmwyl1_3416	-	hypothetical protein
3377	 43.78	0	3861476..3861724	+	82	152997420	-	Mmwyl1_3417	-	hypothetical protein
3378	 40.74	0	3861715..3862119	-	134	152997421	-	Mmwyl1_3418	-	hypothetical protein
3379	 39.43	-1	3862134..3862625	-	163	152997422	-	Mmwyl1_3419	-	putative CheW protein
3380	 45.17	0	3862662..3863624	-	320	152997423	-	Mmwyl1_3420	-	CheW domain-containing protein
3381	 44.06	0	3863634..3864407	-	257	152997424	-	Mmwyl1_3421	-	cobyrinic acid ac-diamide synthase
3382	 41.27	0	3864477..3865295	-	272	152997425	-	Mmwyl1_3422	-	OmpA/MotB domain-containing protein
3383	 39.97	0	3865288..3866025	-	245	152997426	-	Mmwyl1_3423	-	MotA/TolQ/ExbB proton channel
3384	 44.23	0	3866025..3867089	-	354	152997427	-	Mmwyl1_3424	-	chemotaxis-specific methylesterase
3385	 42.45	0	3867116..3869353	-	745	152997428	-	Mmwyl1_3425	-	CheA signal transduction histidine kinase
3386	 40.81	0	3869366..3870154	-	262	152997429	-	Mmwyl1_3426	-	chemotaxis phosphatase, CheZ
3387	 39.90	0	3870164..3870544	-	126	152997430	-	Mmwyl1_3427	-	response regulator receiver protein
3388	 38.89	-1	3870599..3871336	-	245	152997431	-	Mmwyl1_3428	-	RNA polymerase, sigma 28 subunit, FliA/WhiG
3389	 41.28	0	3871433..3872716	-	427	152997432	-	Mmwyl1_3429	-	GTP-binding signal recognition particle
3390	 43.91	0	3872818..3874935	-	705	152997433	-	Mmwyl1_3430	-	flagellar biosynthesis protein FlhA
3391	 43.36	0	3874973..3876109	-	378	152997434	-	Mmwyl1_3431	-	flagellar biosynthetic protein FlhB
3392	 40.36	0	3876102..3876884	-	260	152997435	-	Mmwyl1_3432	-	flagellar biosynthetic protein FliR
3393	 37.41	-1	3876884..3877153	-	89	152997436	-	Mmwyl1_3433	-	flagellar biosynthetic protein FliQ
3394	 42.01	0	3877156..3877893	-	245	152997437	-	Mmwyl1_3434	-	flagellar biosynthesis protein FliP
3395	 41.93	0	3877890..3878273	-	127	152997438	-	Mmwyl1_3435	-	flagellar biosynthesis protein FliO
3396	 46.54	+1	3878319..3878780	-	153	152997439	-	Mmwyl1_3436	-	flagellar motor switch protein FliN
3397	 42.26	0	3878782..3879756	-	324	152997440	-	Mmwyl1_3437	-	flagellar motor switch protein FliM
3398	 41.13	0	3879761..3880273	-	170	152997441	-	Mmwyl1_3438	-	flagellar basal body-associated protein FliL
3399	 45.72	0	3880391..3882094	-	567	152997442	-	Mmwyl1_3439	-	flagellar hook-length control protein
3400	 38.92	-1	3882142..3883860	-	572	152997443	-	Mmwyl1_3440	-	response regulator receiver protein
3401	 36.96	-1	3883867..3884169	-	100	152997444	-	Mmwyl1_3441	-	anti-sigma-factor antagonist
3402	 39.65	-1	3884200..3886098	-	632	152997445	-	Mmwyl1_3442	-	hypothetical protein
3403	 38.82	-1	3886119..3887996	-	625	152997446	-	Mmwyl1_3443	-	hypothetical protein
3404	 43.45	0	3888048..3888482	-	144	152997447	-	Mmwyl1_3444	-	flagellar export protein FliJ
3405	 45.72	0	3888536..3889867	-	443	152997448	-	Mmwyl1_3445	-	flagellar protein export ATPase FliI
3406	 43.37	0	3889873..3890679	-	268	152997449	-	Mmwyl1_3446	-	flagellar assembly protein FliH
3407	 43.79	0	3890687..3891700	-	337	152997450	-	Mmwyl1_3447	-	flagellar motor switch protein G
3408	 42.70	0	3891697..3893373	-	558	152997451	-	Mmwyl1_3448	-	flagellar MS-ring protein
3409	 46.83	+1	3893401..3893763	-	120	152997452	-	Mmwyl1_3449	-	flagellar hook-basal body complex subunit FliE
3410	 42.02	0	3893852..3895198	-	448	152997453	-	Mmwyl1_3450	-	two component, sigma54 specific, Fis family transcriptional regulator
3411	 42.42	0	3895200..3896354	-	384	152997454	-	Mmwyl1_3451	-	PAS/PAC sensor signal transduction histidine kinase
3412	 39.28	-1	3896354..3896824	-	156	152997455	-	Mmwyl1_3452	-	Fis family transcriptional regulator
3413	 44.54	0	3896931..3897608	-	225	152997456	-	Mmwyl1_3453	-	dethiobiotin synthase
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.