IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3260	 43.72	0	3735480..3735845	+	121	152997303	-	Mmwyl1_3298	-	response regulator receiver protein
3261	 40.97	0	3735879..3737894	+	671	152997304	-	Mmwyl1_3299	-	CheA signal transduction histidine kinase
3262	 42.44	0	3737907..3738389	+	160	152997305	-	Mmwyl1_3300	-	putative CheW protein
3263	 42.85	0	3738460..3740340	+	626	152997306	-	Mmwyl1_3301	-	methyl-accepting chemotaxis sensory transducer
3264	 37.72	-1	3740346..3741143	+	265	152997307	-	Mmwyl1_3302	-	protein-glutamate O-methyltransferase
3265	 39.61	-1	3741153..3741773	+	206	152997308	-	Mmwyl1_3303	-	hypothetical protein
3266	 43.09	0	3741791..3742825	+	344	152997309	-	Mmwyl1_3304	-	response regulator receiver modulated CheB methylesterase
3267	 38.59	-1	3742951..3743673	-	240	152997310	-	Mmwyl1_3305	-	integrase catalytic region
3268	 41.91	0	3743778..3744185	-	135	152997311	-	Mmwyl1_3306	-	transposase
3269	 42.35	0	3744242..3745804	-	520	152997312	-	Mmwyl1_3307	-	ferredoxin-dependent glutamate synthase
3270	 38.58	-1	3745858..3748278	-	806	152997313	-	Mmwyl1_3308	-	diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)
3271	 45.81	0	3748606..3750504	-	632	152997314	-	Mmwyl1_3309	-	hypothetical protein
3272	 39.02	-1	3750807..3751298	-	163	152997315	-	Mmwyl1_3310	-	hypothetical protein
3273	 42.42	0	3751339..3752922	-	527	152997316	-	Mmwyl1_3311	-	ABC transporter related
3274	 43.00	0	3753088..3753480	-	130	152997317	-	Mmwyl1_3312	-	hypothetical protein
3275	 42.06	0	3753484..3753861	-	125	152997318	-	Mmwyl1_3313	-	hypothetical protein
3276	 43.79	0	3753879..3754184	-	101	152997319	-	Mmwyl1_3314	-	hypothetical protein
3277	 40.34	0	3755010..3756293	-	427	152997320	-	Mmwyl1_3315	-	hypothetical protein
3278	 38.97	-1	3756521..3756928	+	135	152997321	-	Mmwyl1_3316	-	hypothetical protein
3279	 39.62	-1	3756945..3757883	-	312	152997322	-	Mmwyl1_3317	-	hypothetical protein
3280	 44.07	0	3757999..3758268	+	89	152997323	-	Mmwyl1_3318	-	hypothetical protein
3281	 41.59	0	3758290..3758628	-	112	152997324	-	Mmwyl1_3319	-	thioredoxin domain-containing protein
3282	 43.12	0	3758719..3759096	+	125	152997325	-	Mmwyl1_3320	-	glyoxalase/bleomycin resistance protein/dioxygenase
3283	 40.89	0	3759136..3759426	-	96	152997326	-	Mmwyl1_3321	-	hypothetical protein
3284	 42.10	0	3759603..3761222	-	539	152997327	-	Mmwyl1_3322	-	methyl-accepting chemotaxis sensory transducer
3285	 41.73	0	3761374..3762993	-	539	152997328	-	Mmwyl1_3323	-	methyl-accepting chemotaxis sensory transducer
3286	 37.70	-1	3763191..3764084	-	297	152997329	-	Mmwyl1_3324	-	diguanylate phosphodiesterase
3287	 39.35	-1	3764493..3764891	+	132	152997330	-	Mmwyl1_3325	-	XRE family transcriptional regulator
3288	 44.24	0	3764935..3765594	-	219	152997331	-	Mmwyl1_3326	-	hemolysin III family channel protein
3289	 40.62	0	3765700..3766797	-	365	152997332	-	Mmwyl1_3327	-	amidohydrolase 2
3290	 41.57	0	3766922..3767686	-	254	152997333	-	Mmwyl1_3328	-	putative undecaprenol kinase
3291	 43.22	0	3767872..3768306	+	144	152997334	-	Mmwyl1_3329	-	zinc-responsive transcriptional regulator
3292	 40.57	0	3768476..3770146	-	556	152997335	-	Mmwyl1_3330	-	diguanylate cyclase
3293	 39.82	0	3770293..3770631	-	112	152997336	-	Mmwyl1_3331	-	hypothetical protein
3294	 44.10	0	3770635..3771609	-	324	152997337	-	Mmwyl1_3332	-	chaperone DnaJ domain-containing protein
3295	 30.12	-2	3772059..3772649	+	196	152997338	-	Mmwyl1_3333	-	response regulator receiver protein
3296	 28.76	-2	3772639..3773490	-	283	152997339	-	Mmwyl1_3334	-	hypothetical protein
3297	 34.37	-2	3773480..3775894	-	804	152997340	-	Mmwyl1_3335	-	fimbrial biogenesis outer membrane usher protein
3298	 31.69	-2	3775896..3776624	-	242	152997341	-	Mmwyl1_3336	-	hypothetical protein
3299	 31.76	-2	3776624..3777322	-	232	152997342	-	Mmwyl1_3337	-	hypothetical protein
3300	 42.03	0	3777378..3777860	-	160	152997343	-	Mmwyl1_3338	-	hypothetical protein
3301	 35.46	-2	3777906..3778376	-	156	152997344	-	Mmwyl1_3339	-	hypothetical protein
3302	 40.67	0	3778969..3780468	-	499	152997345	-	Mmwyl1_3340	-	carbon starvation protein CstA
3303	 42.31	0	3780637..3781371	-	244	152997346	-	Mmwyl1_3341	-	putative two-component response-regulatory protein YehT
3304	 41.65	0	3781411..3783081	-	556	152997347	-	Mmwyl1_3342	-	signal transduction histidine kinase, LytS
3305	 44.22	0	3783343..3785529	+	728	152997348	-	Mmwyl1_3343	-	hypothetical protein
3306	 41.18	0	3785743..3786927	+	394	152997349	-	Mmwyl1_3344	-	lytic transglycosylase catalytic
3307	 41.83	0	3787023..3788975	-	650	152997350	-	Mmwyl1_3345	-	hypothetical protein
3308	 38.05	-1	3789135..3790808	-	557	152997351	-	Mmwyl1_3346	-	methyl-accepting chemotaxis sensory transducer
3309	 42.98	0	3791810..3793198	+	462	152997352	-	Mmwyl1_3347	-	citrate transporter
3310	 41.95	0	3793234..3794394	+	386	152997353	-	Mmwyl1_3348	-	iron-containing alcohol dehydrogenase
3311	 42.69	0	3794424..3795920	+	498	152997354	-	Mmwyl1_3349	-	methylmalonate-semialdehyde dehydrogenase
3312	 40.23	0	3795972..3796754	-	260	152997355	-	Mmwyl1_3350	-	transcriptional regulator IclR
3313	 31.12	-2	3797091..3798173	-	360	152997356	-	Mmwyl1_3351	-	ADP-heptose:LPS heptosyltransferase-like protein
3314	 40.14	0	3798881..3799453	-	190	152997357	-	Mmwyl1_3353	-	TetR family transcriptional regulator
3315	 39.38	-1	3799541..3800086	+	181	152997358	-	Mmwyl1_3354	-	deaminase-reductase domain-containing protein
3316	 43.70	0	3800107..3801312	-	401	152997359	-	Mmwyl1_3355	-	hypothetical protein
3317	 41.05	0	3801795..3802766	-	323	152997360	-	Mmwyl1_3356	-	hypothetical protein
3318	 38.38	-1	3803115..3803510	-	131	152997361	-	Mmwyl1_3357	-	hypothetical protein
3319	 44.50	0	3803510..3804655	-	381	152997362	-	Mmwyl1_3358	-	hypothetical protein
3320	 35.69	-2	3804800..3805096	-	98	152997363	-	Mmwyl1_3359	-	hypothetical protein
3321	 41.50	0	3806016..3807044	-	342	152997364	-	Mmwyl1_3360	-	hypothetical protein
3322	 39.29	-1	3807165..3807500	-	111	152997365	-	Mmwyl1_3361	-	hypothetical protein
3323	 39.79	0	3807502..3807888	-	128	152997366	-	Mmwyl1_3362	-	hypothetical protein
3324	 44.94	0	3808189..3808998	-	269	152997367	-	Mmwyl1_3363	-	integrase catalytic region
3325	 46.08	0	3809043..3809348	-	101	152997368	-	Mmwyl1_3364	-	transposase IS3/IS911 family protein
3326	 42.70	0	3809582..3809848	+	88	152997369	-	Mmwyl1_3365	-	hypothetical protein
3327	 40.52	0	3810564..3811022	-	152	152997370	-	Mmwyl1_3367	-	hypothetical protein
3328	 37.62	-1	3811402..3812613	-	403	152997371	-	Mmwyl1_3368	-	hypothetical protein
3329	 32.78	-2	3812613..3813338	-	241	152997372	-	Mmwyl1_3369	-	hypothetical protein
3330	 34.84	-2	3813325..3814584	-	419	152997373	-	Mmwyl1_3370	-	hypothetical protein
3331	 36.74	-1	3814987..3815808	-	273	152997374	-	Mmwyl1_3371	-	hypothetical protein
3332	 42.08	0	3815990..3818047	-	685	152997375	-	Mmwyl1_3372	-	Sel1 domain-containing protein
3333	 47.49	+1	3818278..3819054	-	258	152997376	-	Mmwyl1_3373	-	cobalamin biosynthesis protein CbiG
3334	 48.85	+1	3819051..3819791	-	246	152997377	-	Mmwyl1_3374	-	precorrin-2 C20-methyltransferase
3335	 48.07	+1	3819788..3821158	-	456	152997378	-	Mmwyl1_3375	-	precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
3336	 50.75	+2	3821219..3821884	-	221	152997379	-	Mmwyl1_3376	-	precorrin-8X methylmutase
3337	 48.16	+1	3821881..3822669	-	262	152997380	-	Mmwyl1_3377	-	precorrin-6A reductase
3338	 50.74	+2	3822666..3823820	-	384	152997381	-	Mmwyl1_3378	-	cobalt-precorrin-6A synthase
3339	 49.92	+2	3823825..3825156	-	443	152997382	-	Mmwyl1_3379	-	cobyrinic acid ac-diamide synthase
3340	 48.35	+1	3825177..3826961	-	594	152997383	-	Mmwyl1_3380	-	magnesium chelatase
3341	 41.38	0	3827134..3829842	-	902	152997384	-	Mmwyl1_3381	-	PAS/PAC sensor hybrid histidine kinase
3342	 40.28	0	3829921..3831705	-	594	152997385	-	Mmwyl1_3382	-	response regulator receiver modulated diguanylate cyclase/phosphodiesterase
3343	 41.63	0	3832062..3832664	-	200	152997386	-	Mmwyl1_3383	-	hypothetical protein
3344	 43.92	0	3832930..3833817	+	295	152997387	-	Mmwyl1_3384	-	LysR family transcriptional regulator
3345	 41.96	0	3833932..3834882	+	316	152997388	-	Mmwyl1_3385	-	LysR family transcriptional regulator
3346	 41.28	0	3834909..3835298	+	129	152997389	-	Mmwyl1_3386	-	glyoxalase/bleomycin resistance protein/dioxygenase
3347	 40.87	0	3835430..3836053	-	207	152997390	-	Mmwyl1_3387	-	alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
3348	 39.39	-1	3836125..3836454	-	109	152997391	-	Mmwyl1_3388	-	glutaredoxin-like protein
3349	 44.70	0	3836698..3837603	+	301	152997392	-	Mmwyl1_3389	-	ornithine carbamoyltransferase
3350	 43.37	0	3837692..3838618	+	308	152997393	-	Mmwyl1_3390	-	LysR family transcriptional regulator
3351	 39.44	-1	3838844..3840301	-	485	152997394	-	Mmwyl1_3391	-	histidine kinase
3352	 41.94	0	3840365..3841084	-	239	152997395	-	Mmwyl1_3392	-	two component transcriptional regulator
3353	 39.69	0	3841149..3841604	-	151	152997396	-	Mmwyl1_3393	-	hypothetical protein
3354	 43.30	0	3841634..3842536	-	300	152997397	-	Mmwyl1_3394	-	RNA-binding S4 domain-containing protein
3355	 42.18	0	3842652..3843284	-	210	152997398	-	Mmwyl1_3395	-	Sua5/YciO/YrdC/YwlC family protein
3356	 42.96	0	3843345..3844196	-	283	152997399	-	Mmwyl1_3396	-	phosphotransferase domain-containing protein
3357	 33.89	-2	3844280..3844816	+	178	152997400	-	Mmwyl1_3397	-	intracellular septation protein A
3358	 47.39	+1	3844819..3845124	+	101	152997401	-	Mmwyl1_3398	-	YCII-related
3359	 40.43	0	3845214..3845495	-	93	152997402	-	Mmwyl1_3399	-	putative selenoprotein
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.