IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2864	 37.93	-1	3281856..3282029	+	57	152996907	-	Mmwyl1_2895	-	hypothetical protein
2865	 45.93	0	3282705..3283355	-	216	152996908	-	Mmwyl1_2896	-	hypothetical protein
2866	 48.55	+1	3283466..3284050	+	194	152996909	-	Mmwyl1_2897	-	TetR family transcriptional regulator
2867	 42.04	0	3284249..3284650	+	133	152996910	-	Mmwyl1_2898	-	3-demethylubiquinone-9 3-methyltransferase
2868	 38.23	-1	3285882..3286310	+	142	152996911	-	Mmwyl1_2900	-	hypothetical protein
2869	 38.89	-1	3286343..3286774	+	143	152996912	-	Mmwyl1_2901	-	hypothetical protein
2870	 48.35	+1	3286876..3287661	-	261	152996913	-	Mmwyl1_2902	-	alpha/beta hydrolase fold
2871	 45.66	0	3287654..3288667	-	337	152996914	-	Mmwyl1_2903	-	hypothetical protein
2872	 41.20	0	3288956..3289540	+	194	152996915	-	Mmwyl1_2904	-	hypothetical protein
2873	 46.82	+1	3289570..3290496	-	308	152996916	-	Mmwyl1_2905	-	histone deacetylase superfamily protein
2874	 40.51	0	3290585..3291685	-	366	152996917	-	Mmwyl1_2906	-	metal dependent phosphohydrolase
2875	 42.05	0	3291836..3292294	+	152	152996918	-	Mmwyl1_2907	-	hypothetical protein
2876	 39.30	-1	3292380..3293066	-	228	152996919	-	Mmwyl1_2908	-	hypothetical protein
2877	 43.73	0	3293284..3294639	+	451	152996920	-	Mmwyl1_2909	-	tRNA-i(6)A37 thiotransferase enzyme MiaB
2878	 43.65	0	3294653..3295699	+	348	152996921	-	Mmwyl1_2910	-	PhoH family protein
2879	 40.86	0	3295699..3296163	+	154	152996922	-	Mmwyl1_2911	-	hypothetical protein
2880	 42.91	0	3296176..3297042	+	288	152996923	-	Mmwyl1_2912	-	CBS domain-containing protein
2881	 43.08	0	3297098..3298615	+	505	152996924	-	Mmwyl1_2913	-	apolipoprotein N-acyltransferase
2882	 41.61	0	3298942..3299388	-	148	152996925	-	Mmwyl1_2914	-	hypothetical protein
2883	 45.06	0	3299565..3302012	+	815	152996926	-	Mmwyl1_2915	-	leucyl-tRNA synthetase
2884	 38.57	-1	3302077..3302592	+	171	152996927	-	Mmwyl1_2916	-	rare lipoprotein B precursor
2885	 43.05	0	3302618..3303646	+	342	152996928	-	Mmwyl1_2917	-	DNA polymerase III, delta subunit
2886	 39.65	-1	3303778..3305787	+	669	152996929	-	Mmwyl1_2918	-	methyl-accepting chemotaxis sensory transducer
2887	 44.09	0	3305877..3306536	+	219	152996930	-	Mmwyl1_2919	-	hypothetical protein
2888	 42.69	0	3306734..3307342	+	202	152996931	-	Mmwyl1_2920	-	hypothetical protein
2889	 40.37	0	3307371..3309986	+	871	152996932	-	Mmwyl1_2921	-	cyclic nucleotide-binding protein
2890	 42.83	0	3310040..3310660	-	206	152996933	-	Mmwyl1_2922	-	lysine exporter protein LysE/YggA
2891	 45.36	0	3311028..3311900	+	290	152996934	-	Mmwyl1_2923	-	dihydrodipicolinate synthase
2892	 45.00	0	3311971..3312210	-	79	152996935	-	Mmwyl1_2924	-	transglycosylase-associated protein
2893	 41.81	0	3312448..3313131	+	227	152996936	-	Mmwyl1_2925	-	putative mobilization protein MobD
2894	 43.52	0	3313227..3314090	-	287	152996937	-	Mmwyl1_2926	-	hypothetical protein
2895	 44.20	0	3314376..3316115	-	579	152996938	-	Mmwyl1_2927	-	tannase and feruloyl esterase
2896	 41.41	0	3316458..3317744	+	428	152996939	-	Mmwyl1_2928	-	sodium/hydrogen exchanger
2897	 38.66	-1	3317991..3318854	+	287	152996940	-	Mmwyl1_2929	-	alpha/beta hydrolase fold
2898	 44.08	0	3319289..3320200	+	303	152996941	-	Mmwyl1_2930	-	homocysteine S-methyltransferase
2899	 42.21	0	3320281..3320877	-	198	152996942	-	Mmwyl1_2931	-	hypothetical protein
2900	 41.35	0	3320898..3322544	-	548	152996943	-	Mmwyl1_2932	-	hypothetical protein
2901	 42.37	0	3322541..3323812	-	423	152996944	-	Mmwyl1_2933	-	PqiA family integral membrane protein
2902	 39.32	-1	3323994..3324494	-	166	152996945	-	Mmwyl1_2934	-	hypothetical protein
2903	 40.57	0	3324608..3325450	-	280	152996946	-	Mmwyl1_2935	-	late embryogenesis abundant protein 2
2904	 43.11	0	3325457..3326458	-	333	152996947	-	Mmwyl1_2936	-	hypothetical protein
2905	 39.27	-1	3326485..3326838	-	117	152996948	-	Mmwyl1_2937	-	hypothetical protein
2906	 45.88	0	3327414..3328481	-	355	152996949	-	Mmwyl1_2938	-	23S rRNA pseudouridine synthase F
2907	 41.77	0	3328728..3329213	+	161	152996950	-	Mmwyl1_2939	-	cytochrome B561
2908	 41.39	0	3329227..3329586	-	119	152996951	-	Mmwyl1_2940	-	hypothetical protein
2909	 46.67	+1	3329733..3330302	-	189	152996952	-	Mmwyl1_2941	-	PfpI family intracellular peptidase
2910	 42.73	0	3330678..3331592	-	304	152996953	-	Mmwyl1_2942	-	MscS mechanosensitive ion channel
2911	 38.19	-1	3332034..3332651	-	205	152996954	-	Mmwyl1_2943	-	multiple antibiotic resistance (MarC)-related protein
2912	 42.32	0	3332976..3333587	-	203	152996955	-	Mmwyl1_2944	-	lysine exporter protein LysE/YggA
2913	 40.38	0	3333977..3334756	-	259	152996956	-	Mmwyl1_2945	-	alpha/beta hydrolase fold
2914	 39.54	-1	3334910..3335215	-	101	152996957	-	Mmwyl1_2946	-	NIPSNAP family protein
2915	 38.78	-1	3335374..3335832	-	152	152996958	-	Mmwyl1_2947	-	GCN5-related N-acetyltransferase
2916	 44.68	0	3335917..3336348	-	143	152996959	-	Mmwyl1_2948	-	GCN5-related N-acetyltransferase
2917	 40.74	0	3336877..3337362	-	161	152996960	-	Mmwyl1_2949	-	hypothetical protein
2918	 43.13	0	3337586..3338218	-	210	152996961	-	Mmwyl1_2950	-	chloramphenicol O-acetyltransferase
2919	 36.19	-2	3338322..3338741	-	139	152996962	-	Mmwyl1_2951	-	hypothetical protein
2920	 38.39	-1	3339177..3339749	-	190	152996963	-	Mmwyl1_2952	-	hypothetical protein
2921	 44.94	0	3339833..3340642	-	269	152996964	-	Mmwyl1_2953	-	integrase catalytic region
2922	 46.08	0	3340687..3340992	-	101	152996965	-	Mmwyl1_2954	-	transposase IS3/IS911 family protein
2923	 37.80	-1	3341153..3341533	-	126	152996966	-	Mmwyl1_2955	-	glyoxalase/bleomycin resistance protein/dioxygenase
2924	 42.37	0	3341617..3342081	-	154	152996967	-	Mmwyl1_2956	-	hypothetical protein
2925	 36.36	-1	3342202..3342762	-	186	152996968	-	Mmwyl1_2957	-	hypothetical protein
2926	 45.41	0	3343072..3344214	-	380	152996969	-	Mmwyl1_2958	-	putative transposase
2927	 43.66	0	3344202..3345053	-	283	152996970	-	Mmwyl1_2959	-	phage integrase family protein
2928	 41.73	0	3345829..3346233	-	134	152996971	-	Mmwyl1_2960	-	hypothetical protein
2929	 48.23	+1	3346215..3347852	-	545	152996972	-	Mmwyl1_2961	-	NAD+ synthetase
2930	 41.76	0	3347926..3348186	+	86	152996973	-	Mmwyl1_2962	-	hypothetical protein
2931	 44.64	0	3348170..3348673	-	167	152996974	-	Mmwyl1_2963	-	hypothetical protein
2932	 43.65	0	3348679..3349560	-	293	152996975	-	Mmwyl1_2964	-	hypothetical protein
2933	 43.04	0	3349921..3350466	-	181	152996976	-	Mmwyl1_2965	-	Tfp pilus assembly protein FimT
2934	 45.10	0	3350552..3351418	-	288	152996977	-	Mmwyl1_2966	-	alpha/beta hydrolase
2935	 44.07	0	3351694..3353118	+	474	152996978	-	Mmwyl1_2967	-	para-aminobenzoate synthase, subunit I
2936	 44.24	0	3353127..3353777	+	216	152996979	-	Mmwyl1_2968	-	NUDIX hydrolase
2937	 41.09	0	3353906..3354640	+	244	152996980	-	Mmwyl1_2969	-	phosphoadenosine phosphosulfate reductase
2938	 39.56	-1	3354705..3355025	-	106	152996981	-	Mmwyl1_2970	-	LysR family transcriptional regulator
2939	 48.48	+1	3355137..3356483	+	448	152996982	-	Mmwyl1_2971	-	deoxyguanosinetriphosphate triphosphohydrolase-like protein
2940	 46.08	0	3357463..3357768	+	101	152996983	-	Mmwyl1_2972	-	transposase IS3/IS911 family protein
2941	 44.94	0	3357813..3358622	+	269	152996984	-	Mmwyl1_2973	-	integrase catalytic region
2942	 37.47	-1	3358821..3359594	-	257	152996985	-	Mmwyl1_2974	-	hypothetical protein
2943	 44.35	0	3361160..3362539	-	459	152996986	-	Mmwyl1_2975	-	multidrug efflux pump VmrA
2944	 43.10	0	3362621..3363562	+	313	152996987	-	Mmwyl1_2976	-	LysR family transcriptional regulator
2945	 45.24	0	3364000..3364503	-	167	152996988	-	Mmwyl1_2977	-	GCN5-related N-acetyltransferase
2946	 42.67	0	3364511..3365527	-	338	152996989	-	Mmwyl1_2978	-	hypothetical protein
2947	 42.06	0	3365540..3366364	-	274	152996990	-	Mmwyl1_2979	-	TPR repeat-containing protein
2948	 43.14	0	3366482..3368317	+	611	152996991	-	Mmwyl1_2980	-	cytochrome c biogenesis protein transmembrane region
2949	 44.37	0	3368568..3369011	+	147	152996992	-	Mmwyl1_2981	-	acetyl-CoA carboxylase, biotin carboxyl carrier protein
2950	 44.07	0	3369032..3370372	+	446	152996993	-	Mmwyl1_2982	-	acetyl-CoA carboxylase, biotin carboxylase
2951	 46.58	+1	3370492..3371382	+	296	152996994	-	Mmwyl1_2983	-	ribosomal protein L11 methyltransferase
2952	 44.30	0	3371468..3372826	+	452	152996995	-	Mmwyl1_2984	-	Zinc finger-domain-containing protein
2953	 43.55	0	3373146..3374114	+	322	152996996	-	Mmwyl1_2985	-	nifR3 family TIM-barrel protein
2954	 43.37	0	3374233..3374511	+	92	152996997	-	Mmwyl1_2986	-	Fis family transcriptional regulator
2955	 46.24	0	3374596..3376176	+	526	152996998	-	Mmwyl1_2987	-	phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
2956	 47.94	+1	3376259..3377545	+	428	152996999	-	Mmwyl1_2988	-	phosphoribosylamine--glycine ligase
2957	 40.48	0	3377614..3377865	-	83	152997000	-	Mmwyl1_2989	-	hypothetical protein
2958	 39.03	-1	3377924..3380221	+	765	152997001	-	Mmwyl1_2990	-	diverse 7TM receptor extracellular region 2
2959	 42.40	0	3380266..3380607	+	113	152997002	-	Mmwyl1_2991	-	histidine triad (HIT) protein
2960	 45.66	0	3380622..3381254	+	210	152997003	-	Mmwyl1_2992	-	hypothetical protein
2961	 44.08	0	3381257..3381898	+	213	152997004	-	Mmwyl1_2993	-	pyridoxamine 5'-phosphate oxidase
2962	 45.16	0	3381943..3382500	-	185	152997005	-	Mmwyl1_2994	-	putative alkylated DNA repair protein
2963	 38.71	-1	3382526..3383251	+	241	152997006	-	Mmwyl1_2995	-	hypothetical protein
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.