IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2802	 39.49	-1	3209458..3209652	+	64	152996845	-	Mmwyl1_2833	-	BFD/(2Fe-2S)-binding domain-containing protein
2803	 37.63	-1	3209666..3210130	-	154	152996846	-	Mmwyl1_2834	-	bacterioferritin
2804	 39.45	-1	3210142..3210615	-	157	152996847	-	Mmwyl1_2835	-	bacterioferritin
2805	 42.65	0	3210736..3213033	-	765	152996848	-	Mmwyl1_2836	-	DNA topoisomerase IV subunit A
2806	 40.95	0	3213212..3213946	+	244	152996849	-	Mmwyl1_2837	-	hypothetical protein
2807	 41.22	0	3213953..3214840	-	295	152996850	-	Mmwyl1_2838	-	GCN5-related N-acetyltransferase
2808	 43.00	0	3215205..3216083	-	292	152996851	-	Mmwyl1_2839	-	Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
2809	 41.26	0	3216131..3218035	-	634	152996852	-	Mmwyl1_2840	-	arginine decarboxylase
2810	 43.96	0	3218191..3219150	-	319	152996853	-	Mmwyl1_2841	-	lipoyl synthase
2811	 43.88	0	3219152..3219796	-	214	152996854	-	Mmwyl1_2842	-	lipoate-protein ligase B
2812	 38.56	-1	3219797..3220102	-	101	152996855	-	Mmwyl1_2843	-	hypothetical protein
2813	 40.91	0	3220132..3221280	-	382	152996856	-	Mmwyl1_2844	-	Serine-type D-Ala-D-Ala carboxypeptidase
2814	 44.23	0	3221364..3222299	-	311	152996857	-	Mmwyl1_2845	-	rare lipoprotein A
2815	 41.76	0	3222286..3223341	-	351	152996858	-	Mmwyl1_2846	-	lytic murein transglycosylase B
2816	 43.67	0	3223341..3224462	-	373	152996859	-	Mmwyl1_2847	-	rod shape-determining protein RodA
2817	 43.91	0	3224455..3226335	-	626	152996860	-	Mmwyl1_2848	-	peptidoglycan glycosyltransferase
2818	 45.30	0	3226345..3226812	-	155	152996861	-	Mmwyl1_2849	-	hypothetical protein
2819	 39.55	-1	3226824..3227177	-	117	152996862	-	Mmwyl1_2850	-	iojap-like protein
2820	 43.24	0	3227192..3227857	-	221	152996863	-	Mmwyl1_2851	-	nicotinate (nicotinamide) nucleotide adenylyltransferase
2821	 43.57	0	3227847..3229106	-	419	152996864	-	Mmwyl1_2852	-	gamma-glutamyl phosphate reductase
2822	 42.22	0	3229239..3229958	+	239	152996865	-	Mmwyl1_2853	-	hypothetical protein
2823	 38.55	-1	3229970..3230218	+	82	152996866	-	Mmwyl1_2854	-	hypothetical protein
2824	 42.60	0	3230353..3232035	-	560	152996867	-	Mmwyl1_2855	-	30S ribosomal protein S1
2825	 45.61	0	3232217..3232900	-	227	152996868	-	Mmwyl1_2856	-	cytidylate kinase
2826	 45.35	0	3232920..3235166	-	748	152996869	-	Mmwyl1_2857	-	prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase
2827	 46.17	0	3235190..3236311	-	373	152996870	-	Mmwyl1_2858	-	chorismate mutase
2828	 42.78	0	3236351..3237430	-	359	152996871	-	Mmwyl1_2859	-	phosphoserine aminotransferase
2829	 44.33	0	3237506..3240196	-	896	152996872	-	Mmwyl1_2860	-	DNA gyrase, A subunit
2830	 42.60	0	3240533..3241255	+	240	152996873	-	Mmwyl1_2861	-	ubiquinone biosynthesis O-methyltransferase
2831	 46.77	+1	3241276..3242019	+	247	152996874	-	Mmwyl1_2862	-	short-chain dehydrogenase/reductase SDR
2832	 40.08	0	3242218..3245109	+	963	152996875	-	Mmwyl1_2863	-	peptidase M16 domain-containing protein
2833	 45.56	0	3245140..3245679	-	179	152996876	-	Mmwyl1_2864	-	hypothetical protein
2834	 43.14	0	3245783..3246985	-	400	152996877	-	Mmwyl1_2865	-	trans-2-enoyl-CoA reductase
2835	 41.52	0	3247149..3248381	+	410	152996878	-	Mmwyl1_2866	-	glycosyl transferase group 1
2836	 43.08	0	3248397..3248591	-	64	152996879	-	Mmwyl1_2867	-	hypothetical protein
2837	 42.68	0	3248653..3249369	-	238	152996880	-	Mmwyl1_2868	-	hypothetical protein
2838	 42.93	0	3249549..3250715	-	388	152996881	-	Mmwyl1_2869	-	GntR family transcriptional regulator
2839	 37.75	-1	3250826..3251731	-	301	152996882	-	Mmwyl1_2870	-	phospholipid/glycerol acyltransferase
2840	 40.16	0	3251972..3253378	+	468	152996883	-	Mmwyl1_2871	-	integral membrane sensor signal transduction histidine kinase
2841	 40.82	0	3253410..3254090	+	226	152996884	-	Mmwyl1_2872	-	two component transcriptional regulator
2842	 38.56	-1	3254107..3255063	+	318	152996885	-	Mmwyl1_2873	-	auxin efflux carrier
2843	 39.10	-1	3255122..3257203	+	693	152996886	-	Mmwyl1_2874	-	multi-sensor signal transduction histidine kinase
2844	 43.23	0	3257205..3258578	+	457	152996887	-	Mmwyl1_2875	-	two component, sigma54 specific, Fis family transcriptional regulator
2845	 40.54	0	3258714..3259601	+	295	152996888	-	Mmwyl1_2876	-	hypothetical protein
2846	 42.27	0	3259625..3260161	+	178	152996889	-	Mmwyl1_2877	-	flavodoxin
2847	 38.41	-1	3260432..3260746	+	104	152996890	-	Mmwyl1_2878	-	hypothetical protein
2848	 39.06	-1	3260987..3262873	+	628	152996891	-	Mmwyl1_2879	-	methyl-accepting chemotaxis sensory transducer
2849	 41.43	0	3262973..3264454	-	493	152996892	-	Mmwyl1_2880	-	glutamyl-tRNA synthetase
2850	 40.15	0	3264557..3265348	-	263	152996893	-	Mmwyl1_2881	-	5'-3' exonuclease
2851	 39.22	-1	3265466..3266722	+	418	152996894	-	Mmwyl1_2882	-	hypothetical protein
2852	 39.73	0	3266919..3268247	+	442	152996895	-	Mmwyl1_2883	-	TolC family type I secretion outer membrane protein
2853	 40.34	0	3268327..3269625	-	432	152996896	-	Mmwyl1_2884	-	putative aminopeptidase 2
2854	 42.78	0	3269701..3271797	+	698	152996897	-	Mmwyl1_2885	-	carboxyl-terminal protease
2855	 42.61	0	3271898..3272188	+	96	152996898	-	Mmwyl1_2886	-	helix-turn-helix protein
2856	 43.52	0	3272259..3272837	+	192	152996899	-	Mmwyl1_2887	-	thymidine kinase
2857	 42.59	0	3272840..3273736	+	298	152996900	-	Mmwyl1_2888	-	putative exonuclease RdgC
2858	 43.96	0	3274035..3275201	+	388	152996901	-	Mmwyl1_2889	-	cation diffusion facilitator family transporter
2859	 43.99	0	3275505..3276818	-	437	152996902	-	Mmwyl1_2890	-	hypothetical protein
2860	 43.37	0	3277014..3277631	+	205	152996903	-	Mmwyl1_2891	-	hypothetical protein
2861	 47.68	+1	3277634..3280462	+	942	152996904	-	Mmwyl1_2892	-	ATP-dependent helicase HepA
2862	 47.73	+1	3280481..3281119	+	212	152996905	-	Mmwyl1_2893	-	pseudouridine synthase
2863	 42.03	0	3281639..3281845	+	68	152996906	-	Mmwyl1_2894	-	hypothetical protein
2864	 37.93	-1	3281856..3282029	+	57	152996907	-	Mmwyl1_2895	-	hypothetical protein
2865	 45.93	0	3282705..3283355	-	216	152996908	-	Mmwyl1_2896	-	hypothetical protein
2866	 48.55	+1	3283466..3284050	+	194	152996909	-	Mmwyl1_2897	-	TetR family transcriptional regulator
2867	 42.04	0	3284249..3284650	+	133	152996910	-	Mmwyl1_2898	-	3-demethylubiquinone-9 3-methyltransferase
2868	 38.23	-1	3285882..3286310	+	142	152996911	-	Mmwyl1_2900	-	hypothetical protein
2869	 38.89	-1	3286343..3286774	+	143	152996912	-	Mmwyl1_2901	-	hypothetical protein
2870	 48.35	+1	3286876..3287661	-	261	152996913	-	Mmwyl1_2902	-	alpha/beta hydrolase fold
2871	 45.66	0	3287654..3288667	-	337	152996914	-	Mmwyl1_2903	-	hypothetical protein
2872	 41.20	0	3288956..3289540	+	194	152996915	-	Mmwyl1_2904	-	hypothetical protein
2873	 46.82	+1	3289570..3290496	-	308	152996916	-	Mmwyl1_2905	-	histone deacetylase superfamily protein
2874	 40.51	0	3290585..3291685	-	366	152996917	-	Mmwyl1_2906	-	metal dependent phosphohydrolase
2875	 42.05	0	3291836..3292294	+	152	152996918	-	Mmwyl1_2907	-	hypothetical protein
2876	 39.30	-1	3292380..3293066	-	228	152996919	-	Mmwyl1_2908	-	hypothetical protein
2877	 43.73	0	3293284..3294639	+	451	152996920	-	Mmwyl1_2909	-	tRNA-i(6)A37 thiotransferase enzyme MiaB
2878	 43.65	0	3294653..3295699	+	348	152996921	-	Mmwyl1_2910	-	PhoH family protein
2879	 40.86	0	3295699..3296163	+	154	152996922	-	Mmwyl1_2911	-	hypothetical protein
2880	 42.91	0	3296176..3297042	+	288	152996923	-	Mmwyl1_2912	-	CBS domain-containing protein
2881	 43.08	0	3297098..3298615	+	505	152996924	-	Mmwyl1_2913	-	apolipoprotein N-acyltransferase
2882	 41.61	0	3298942..3299388	-	148	152996925	-	Mmwyl1_2914	-	hypothetical protein
2883	 45.06	0	3299565..3302012	+	815	152996926	-	Mmwyl1_2915	-	leucyl-tRNA synthetase
2884	 38.57	-1	3302077..3302592	+	171	152996927	-	Mmwyl1_2916	-	rare lipoprotein B precursor
2885	 43.05	0	3302618..3303646	+	342	152996928	-	Mmwyl1_2917	-	DNA polymerase III, delta subunit
2886	 39.65	-1	3303778..3305787	+	669	152996929	-	Mmwyl1_2918	-	methyl-accepting chemotaxis sensory transducer
2887	 44.09	0	3305877..3306536	+	219	152996930	-	Mmwyl1_2919	-	hypothetical protein
2888	 42.69	0	3306734..3307342	+	202	152996931	-	Mmwyl1_2920	-	hypothetical protein
2889	 40.37	0	3307371..3309986	+	871	152996932	-	Mmwyl1_2921	-	cyclic nucleotide-binding protein
2890	 42.83	0	3310040..3310660	-	206	152996933	-	Mmwyl1_2922	-	lysine exporter protein LysE/YggA
2891	 45.36	0	3311028..3311900	+	290	152996934	-	Mmwyl1_2923	-	dihydrodipicolinate synthase
2892	 45.00	0	3311971..3312210	-	79	152996935	-	Mmwyl1_2924	-	transglycosylase-associated protein
2893	 41.81	0	3312448..3313131	+	227	152996936	-	Mmwyl1_2925	-	putative mobilization protein MobD
2894	 43.52	0	3313227..3314090	-	287	152996937	-	Mmwyl1_2926	-	hypothetical protein
2895	 44.20	0	3314376..3316115	-	579	152996938	-	Mmwyl1_2927	-	tannase and feruloyl esterase
2896	 41.41	0	3316458..3317744	+	428	152996939	-	Mmwyl1_2928	-	sodium/hydrogen exchanger
2897	 38.66	-1	3317991..3318854	+	287	152996940	-	Mmwyl1_2929	-	alpha/beta hydrolase fold
2898	 44.08	0	3319289..3320200	+	303	152996941	-	Mmwyl1_2930	-	homocysteine S-methyltransferase
2899	 42.21	0	3320281..3320877	-	198	152996942	-	Mmwyl1_2931	-	hypothetical protein
2900	 41.35	0	3320898..3322544	-	548	152996943	-	Mmwyl1_2932	-	hypothetical protein
2901	 42.37	0	3322541..3323812	-	423	152996944	-	Mmwyl1_2933	-	PqiA family integral membrane protein
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.