IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2762	 37.24	-1	3163936..3164370	+	144	152996805	-	Mmwyl1_2792	-	hypothetical protein
2763	 43.01	0	3164401..3164865	-	154	152996806	-	Mmwyl1_2793	-	hypothetical protein
2764	 42.57	0	3164962..3166185	-	407	152996807	-	Mmwyl1_2794	-	hypothetical protein
2765	 44.67	0	3166539..3167411	-	290	152996808	-	Mmwyl1_2796	-	succinyl-CoA synthetase, alpha subunit
2766	 44.04	0	3167414..3168580	-	388	152996809	-	Mmwyl1_2797	-	succinyl-CoA synthetase, beta subunit
2767	 42.85	0	3168668..3170107	-	479	152996810	-	Mmwyl1_2798	-	dihydrolipoamide dehydrogenase
2768	 46.17	0	3170193..3171719	-	508	152996811	-	Mmwyl1_2799	-	2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase
2769	 43.16	0	3171753..3174590	-	945	152996812	-	Mmwyl1_2800	-	2-oxoglutarate dehydrogenase, E1 subunit
2770	 43.83	0	3174966..3175670	-	234	152996813	-	Mmwyl1_2801	-	succinate dehydrogenase iron-sulfur subunit
2771	 45.06	0	3175683..3177455	-	590	152996814	-	Mmwyl1_2802	-	succinate dehydrogenase flavoprotein subunit
2772	 40.23	0	3177459..3177806	-	115	152996815	-	Mmwyl1_2803	-	succinate dehydrogenase hydrophobic membrane anchor
2773	 41.14	0	3177800..3178132	-	110	152996816	-	Mmwyl1_2804	-	succinate dehydrogenase cytochrome b556 subunit
2774	 42.99	0	3178749..3180032	+	427	152996817	-	Mmwyl1_2805	-	citrate synthase I
2775	 40.69	0	3180111..3180341	-	76	152996818	-	Mmwyl1_2806	-	hypothetical protein
2776	 41.07	0	3180342..3181427	-	361	152996819	-	Mmwyl1_2807	-	hypothetical protein
2777	 45.04	0	3181543..3182601	+	352	152996820	-	Mmwyl1_2808	-	phosphoribosylformylglycinamidine cyclo-ligase
2778	 40.21	0	3182598..3183251	+	217	152996821	-	Mmwyl1_2809	-	phosphoribosylglycinamide formyltransferase
2779	 37.38	-1	3183265..3184005	+	246	152996822	-	Mmwyl1_2810	-	hypothetical protein
2780	 42.01	0	3184032..3184607	-	191	152996823	-	Mmwyl1_2811	-	molybdopterin-guanine dinucleotide biosynthesis protein A
2781	 44.38	0	3184619..3185632	-	337	152996824	-	Mmwyl1_2812	-	glycosyl transferase family protein
2782	 45.52	0	3185629..3188328	-	899	152996825	-	Mmwyl1_2813	-	molybdopterin oxidoreductase
2783	 45.24	0	3188625..3188960	-	111	152996826	-	Mmwyl1_2814	-	nitrite reductase (NAD(P)H), small subunit
2784	 45.21	0	3188965..3191523	-	852	152996827	-	Mmwyl1_2815	-	nitrite reductase (NAD(P)H), large subunit
2785	 43.64	0	3191594..3192835	-	413	152996828	-	Mmwyl1_2816	-	FAD-dependent pyridine nucleotide-disulphide oxidoreductase
2786	 44.05	0	3192828..3193676	-	282	152996829	-	Mmwyl1_2817	-	nitrate ABC transporter, ATPase subunits C and D
2787	 43.11	0	3193718..3194689	-	323	152996830	-	Mmwyl1_2818	-	binding-protein-dependent transport systems inner membrane component
2788	 44.11	0	3194754..3196163	-	469	152996831	-	Mmwyl1_2819	-	putative nitrate transport protein
2789	 42.04	0	3196511..3197704	-	397	152996832	-	Mmwyl1_2820	-	nitrate transporter
2790	 44.44	0	3197701..3198375	-	224	152996833	-	Mmwyl1_2821	-	response regulator receiver/ANTAR domain-containing protein
2791	 41.67	0	3198505..3199140	-	211	152996834	-	Mmwyl1_2822	-	response regulator receiver protein
2792	 39.94	0	3199245..3200576	-	443	152996835	-	Mmwyl1_2823	-	HlyD family type I secretion membrane fusion protein
2793	 42.25	0	3200579..3202867	-	762	152996836	-	Mmwyl1_2824	-	ABC transporter related
2794	 40.05	0	3203011..3203382	+	123	152996837	-	Mmwyl1_2825	-	hypothetical protein
2795	 40.10	0	3203423..3205372	-	649	152996838	-	Mmwyl1_2826	-	diguanylate cyclase/phosphodiesterase
2796	 40.87	0	3205383..3206072	-	229	152996839	-	Mmwyl1_2827	-	periplasmic protein-like protein
2797	 42.52	0	3206080..3206373	-	97	152996840	-	Mmwyl1_2828	-	hypothetical protein
2798	 43.28	0	3206412..3207014	-	200	152996841	-	Mmwyl1_2829	-	DTW domain-containing protein
2799	 42.15	0	3207045..3207770	-	241	152996842	-	Mmwyl1_2830	-	pyridoxal phosphate biosynthetic protein PdxJ
2800	 43.56	0	3207916..3208590	+	224	152996843	-	Mmwyl1_2831	-	DNA-3-methyladenine glycosylase
2801	 42.99	0	3208628..3209269	+	213	152996844	-	Mmwyl1_2832	-	DSBA oxidoreductase
2802	 39.49	-1	3209458..3209652	+	64	152996845	-	Mmwyl1_2833	-	BFD/(2Fe-2S)-binding domain-containing protein
2803	 37.63	-1	3209666..3210130	-	154	152996846	-	Mmwyl1_2834	-	bacterioferritin
2804	 39.45	-1	3210142..3210615	-	157	152996847	-	Mmwyl1_2835	-	bacterioferritin
2805	 42.65	0	3210736..3213033	-	765	152996848	-	Mmwyl1_2836	-	DNA topoisomerase IV subunit A
2806	 40.95	0	3213212..3213946	+	244	152996849	-	Mmwyl1_2837	-	hypothetical protein
2807	 41.22	0	3213953..3214840	-	295	152996850	-	Mmwyl1_2838	-	GCN5-related N-acetyltransferase
2808	 43.00	0	3215205..3216083	-	292	152996851	-	Mmwyl1_2839	-	Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
2809	 41.26	0	3216131..3218035	-	634	152996852	-	Mmwyl1_2840	-	arginine decarboxylase
2810	 43.96	0	3218191..3219150	-	319	152996853	-	Mmwyl1_2841	-	lipoyl synthase
2811	 43.88	0	3219152..3219796	-	214	152996854	-	Mmwyl1_2842	-	lipoate-protein ligase B
2812	 38.56	-1	3219797..3220102	-	101	152996855	-	Mmwyl1_2843	-	hypothetical protein
2813	 40.91	0	3220132..3221280	-	382	152996856	-	Mmwyl1_2844	-	Serine-type D-Ala-D-Ala carboxypeptidase
2814	 44.23	0	3221364..3222299	-	311	152996857	-	Mmwyl1_2845	-	rare lipoprotein A
2815	 41.76	0	3222286..3223341	-	351	152996858	-	Mmwyl1_2846	-	lytic murein transglycosylase B
2816	 43.67	0	3223341..3224462	-	373	152996859	-	Mmwyl1_2847	-	rod shape-determining protein RodA
2817	 43.91	0	3224455..3226335	-	626	152996860	-	Mmwyl1_2848	-	peptidoglycan glycosyltransferase
2818	 45.30	0	3226345..3226812	-	155	152996861	-	Mmwyl1_2849	-	hypothetical protein
2819	 39.55	-1	3226824..3227177	-	117	152996862	-	Mmwyl1_2850	-	iojap-like protein
2820	 43.24	0	3227192..3227857	-	221	152996863	-	Mmwyl1_2851	-	nicotinate (nicotinamide) nucleotide adenylyltransferase
2821	 43.57	0	3227847..3229106	-	419	152996864	-	Mmwyl1_2852	-	gamma-glutamyl phosphate reductase
2822	 42.22	0	3229239..3229958	+	239	152996865	-	Mmwyl1_2853	-	hypothetical protein
2823	 38.55	-1	3229970..3230218	+	82	152996866	-	Mmwyl1_2854	-	hypothetical protein
2824	 42.60	0	3230353..3232035	-	560	152996867	-	Mmwyl1_2855	-	30S ribosomal protein S1
2825	 45.61	0	3232217..3232900	-	227	152996868	-	Mmwyl1_2856	-	cytidylate kinase
2826	 45.35	0	3232920..3235166	-	748	152996869	-	Mmwyl1_2857	-	prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase
2827	 46.17	0	3235190..3236311	-	373	152996870	-	Mmwyl1_2858	-	chorismate mutase
2828	 42.78	0	3236351..3237430	-	359	152996871	-	Mmwyl1_2859	-	phosphoserine aminotransferase
2829	 44.33	0	3237506..3240196	-	896	152996872	-	Mmwyl1_2860	-	DNA gyrase, A subunit
2830	 42.60	0	3240533..3241255	+	240	152996873	-	Mmwyl1_2861	-	ubiquinone biosynthesis O-methyltransferase
2831	 46.77	+1	3241276..3242019	+	247	152996874	-	Mmwyl1_2862	-	short-chain dehydrogenase/reductase SDR
2832	 40.08	0	3242218..3245109	+	963	152996875	-	Mmwyl1_2863	-	peptidase M16 domain-containing protein
2833	 45.56	0	3245140..3245679	-	179	152996876	-	Mmwyl1_2864	-	hypothetical protein
2834	 43.14	0	3245783..3246985	-	400	152996877	-	Mmwyl1_2865	-	trans-2-enoyl-CoA reductase
2835	 41.52	0	3247149..3248381	+	410	152996878	-	Mmwyl1_2866	-	glycosyl transferase group 1
2836	 43.08	0	3248397..3248591	-	64	152996879	-	Mmwyl1_2867	-	hypothetical protein
2837	 42.68	0	3248653..3249369	-	238	152996880	-	Mmwyl1_2868	-	hypothetical protein
2838	 42.93	0	3249549..3250715	-	388	152996881	-	Mmwyl1_2869	-	GntR family transcriptional regulator
2839	 37.75	-1	3250826..3251731	-	301	152996882	-	Mmwyl1_2870	-	phospholipid/glycerol acyltransferase
2840	 40.16	0	3251972..3253378	+	468	152996883	-	Mmwyl1_2871	-	integral membrane sensor signal transduction histidine kinase
2841	 40.82	0	3253410..3254090	+	226	152996884	-	Mmwyl1_2872	-	two component transcriptional regulator
2842	 38.56	-1	3254107..3255063	+	318	152996885	-	Mmwyl1_2873	-	auxin efflux carrier
2843	 39.10	-1	3255122..3257203	+	693	152996886	-	Mmwyl1_2874	-	multi-sensor signal transduction histidine kinase
2844	 43.23	0	3257205..3258578	+	457	152996887	-	Mmwyl1_2875	-	two component, sigma54 specific, Fis family transcriptional regulator
2845	 40.54	0	3258714..3259601	+	295	152996888	-	Mmwyl1_2876	-	hypothetical protein
2846	 42.27	0	3259625..3260161	+	178	152996889	-	Mmwyl1_2877	-	flavodoxin
2847	 38.41	-1	3260432..3260746	+	104	152996890	-	Mmwyl1_2878	-	hypothetical protein
2848	 39.06	-1	3260987..3262873	+	628	152996891	-	Mmwyl1_2879	-	methyl-accepting chemotaxis sensory transducer
2849	 41.43	0	3262973..3264454	-	493	152996892	-	Mmwyl1_2880	-	glutamyl-tRNA synthetase
2850	 40.15	0	3264557..3265348	-	263	152996893	-	Mmwyl1_2881	-	5'-3' exonuclease
2851	 39.22	-1	3265466..3266722	+	418	152996894	-	Mmwyl1_2882	-	hypothetical protein
2852	 39.73	0	3266919..3268247	+	442	152996895	-	Mmwyl1_2883	-	TolC family type I secretion outer membrane protein
2853	 40.34	0	3268327..3269625	-	432	152996896	-	Mmwyl1_2884	-	putative aminopeptidase 2
2854	 42.78	0	3269701..3271797	+	698	152996897	-	Mmwyl1_2885	-	carboxyl-terminal protease
2855	 42.61	0	3271898..3272188	+	96	152996898	-	Mmwyl1_2886	-	helix-turn-helix protein
2856	 43.52	0	3272259..3272837	+	192	152996899	-	Mmwyl1_2887	-	thymidine kinase
2857	 42.59	0	3272840..3273736	+	298	152996900	-	Mmwyl1_2888	-	putative exonuclease RdgC
2858	 43.96	0	3274035..3275201	+	388	152996901	-	Mmwyl1_2889	-	cation diffusion facilitator family transporter
2859	 43.99	0	3275505..3276818	-	437	152996902	-	Mmwyl1_2890	-	hypothetical protein
2860	 43.37	0	3277014..3277631	+	205	152996903	-	Mmwyl1_2891	-	hypothetical protein
2861	 47.68	+1	3277634..3280462	+	942	152996904	-	Mmwyl1_2892	-	ATP-dependent helicase HepA
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.