IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2596	 43.38	0	2969970..2971283	-	437	152996639	-	Mmwyl1_2626	-	adenylosuccinate synthase
2597	 44.19	0	2971307..2972485	-	392	152996640	-	Mmwyl1_2627	-	tRNA synthetase class II (G H P and S)
2598	 45.45	0	2972498..2972695	-	65	152996641	-	Mmwyl1_2628	-	hypothetical protein
2599	 41.95	0	2972811..2973692	-	293	152996642	-	Mmwyl1_2629	-	HflC protein
2600	 44.74	0	2973692..2974936	-	414	152996643	-	Mmwyl1_2630	-	HflK protein
2601	 44.19	0	2974977..2976266	-	429	152996644	-	Mmwyl1_2631	-	GTP-binding protein HSR1-related
2602	 37.80	-1	2976302..2976547	-	81	152996645	-	Mmwyl1_2632	-	RNA chaperone Hfq
2603	 44.59	0	2976637..2977569	-	310	152996646	-	Mmwyl1_2633	-	tRNA delta(2)-isopentenylpyrophosphate transferase
2604	 45.38	0	2977571..2979496	-	641	152996647	-	Mmwyl1_2634	-	DNA mismatch repair protein
2605	 42.44	0	2979555..2980883	-	442	152996648	-	Mmwyl1_2635	-	N-acetylmuramoyl-L-alanine amidase
2606	 46.32	0	2980978..2981439	-	153	152996649	-	Mmwyl1_2636	-	hypothetical protein
2607	 44.53	0	2981596..2982345	+	249	152996650	-	Mmwyl1_2637	-	hypothetical protein
2608	 40.68	0	2982440..2982997	-	185	152996651	-	Mmwyl1_2638	-	oligoribonuclease
2609	 43.77	0	2983072..2984106	+	344	152996652	-	Mmwyl1_2639	-	ribosome-associated GTPase
2610	 40.95	0	2984103..2985008	-	301	152996653	-	Mmwyl1_2640	-	OmpA/MotB domain-containing protein
2611	 42.46	0	2985045..2985899	-	284	152996654	-	Mmwyl1_2641	-	flagellar motor component
2612	 39.35	-1	2986021..2987499	+	492	152996655	-	Mmwyl1_2642	-	metal-dependent hydrolase HDOD
2613	 42.74	0	2987525..2988385	+	286	152996656	-	Mmwyl1_2643	-	phosphatidylserine decarboxylase
2614	 44.04	0	2988455..2989369	-	304	152996657	-	Mmwyl1_2644	-	protein-export membrane protein SecF
2615	 44.52	0	2989379..2991229	-	616	152996658	-	Mmwyl1_2645	-	preprotein translocase subunit SecD
2616	 42.51	0	2991308..2991634	-	108	152996659	-	Mmwyl1_2646	-	preprotein translocase, YajC subunit
2617	 43.98	0	2991707..2992852	-	381	152996660	-	Mmwyl1_2647	-	queuine tRNA-ribosyltransferase
2618	 44.44	0	2992858..2993919	-	353	152996661	-	Mmwyl1_2648	-	S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
2619	 39.90	0	2994265..2994462	+	65	152996662	-	Mmwyl1_2649	-	hypothetical protein
2620	 42.28	0	2994459..2995274	-	271	152996663	-	Mmwyl1_2650	-	transcriptional regulator
2621	 45.10	0	2995511..2996938	+	475	152996664	-	Mmwyl1_2651	-	amino acid carrier protein
2622	 45.23	0	2996992..2998395	+	467	152996665	-	Mmwyl1_2652	-	aspartate ammonia-lyase
2623	 42.93	0	2998392..2999423	+	343	152996666	-	Mmwyl1_2653	-	asparaginase
2624	 42.66	0	2999493..2999846	-	117	152996667	-	Mmwyl1_2654	-	glyoxalase/bleomycin resistance protein/dioxygenase
2625	 41.89	0	2999854..3000741	-	295	152996668	-	Mmwyl1_2655	-	ribosomal protein L35
2626	 43.34	0	3000842..3001900	-	352	152996669	-	Mmwyl1_2656	-	2-nitropropane dioxygenase NPD
2627	 43.41	0	3001944..3002459	-	171	152996670	-	Mmwyl1_2657	-	NADPH-dependent FMN reductase
2628	 42.86	0	3002549..3002989	+	146	152996671	-	Mmwyl1_2658	-	GtrA family protein
2629	 43.75	0	3003047..3004054	-	335	152996672	-	Mmwyl1_2659	-	pirin domain-containing protein
2630	 38.94	-1	3004173..3005438	-	421	152996673	-	Mmwyl1_2660	-	integral membrane sensor signal transduction histidine kinase
2631	 39.21	-1	3005435..3006115	-	226	152996674	-	Mmwyl1_2661	-	two component transcriptional regulator
2632	 44.64	0	3006274..3007299	+	341	152996675	-	Mmwyl1_2662	-	glycosyl transferase family protein
2633	 41.23	0	3007299..3008729	+	476	152996676	-	Mmwyl1_2663	-	glycosyl transferase family protein
2634	 43.27	0	3008929..3010035	-	368	152996677	-	Mmwyl1_2664	-	AraC family transcriptional regulator
2635	 42.74	0	3010301..3011491	-	396	152996678	-	Mmwyl1_2665	-	oxidoreductase FAD-binding subunit
2636	 44.24	0	3011712..3012986	+	424	152996679	-	Mmwyl1_2666	-	Rieske (2Fe-2S) domain-containing protein
2637	 41.39	0	3013071..3013976	-	301	152996680	-	Mmwyl1_2667	-	LysR family transcriptional regulator
2638	 45.39	0	3014106..3015092	+	328	152996681	-	Mmwyl1_2668	-	oxidoreductase FAD-binding subunit
2639	 44.39	0	3015200..3016456	+	418	152996682	-	Mmwyl1_2669	-	Rieske (2Fe-2S) domain-containing protein
2640	 39.88	0	3016459..3016947	+	162	152996683	-	Mmwyl1_2670	-	aromatic-ring-hydroxylating dioxygenase beta subunit
2641	 40.63	0	3016983..3017297	+	104	152996684	-	Mmwyl1_2671	-	Rieske (2Fe-2S) domain-containing protein
2642	 42.89	0	3017387..3018349	+	320	152996685	-	Mmwyl1_2672	-	TRAP transporter solute receptor TAXI family protein
2643	 44.91	0	3018405..3020348	+	647	152996686	-	Mmwyl1_2673	-	TRAP transporter, 4TM/12TM fusion protein
2644	 42.68	0	3020358..3020999	+	213	152996687	-	Mmwyl1_2674	-	maleylacetoacetate isomerase
2645	 45.25	0	3021060..3022091	+	343	152996688	-	Mmwyl1_2675	-	cupin 2 domain-containing protein
2646	 43.12	0	3022136..3022840	+	234	152996689	-	Mmwyl1_2676	-	fumarylacetoacetate (FAA) hydrolase
2647	 42.15	0	3022905..3024242	-	445	152996690	-	Mmwyl1_2677	-	phosphatidylserine synthase
2648	 44.76	0	3024400..3025353	-	317	152996691	-	Mmwyl1_2678	-	LysR family transcriptional regulator
2649	 47.74	+1	3025484..3025726	+	80	152996692	-	Mmwyl1_2679	-	hypothetical protein
2650	 36.80	-1	3026052..3027896	+	614	152996693	-	Mmwyl1_2680	-	hypothetical protein
2651	 37.60	-1	3028201..3029115	-	304	152996694	-	Mmwyl1_2681	-	hypothetical protein
2652	 46.03	0	3029761..3030666	-	301	152996695	-	Mmwyl1_2682	-	LysR family transcriptional regulator
2653	 44.23	0	3030813..3031739	+	308	152996696	-	Mmwyl1_2683	-	dihydrodipicolinate synthetase
2654	 42.17	0	3031830..3032825	+	331	152996697	-	Mmwyl1_2684	-	TRAP transporter solute receptor TAXI family protein
2655	 44.60	0	3032871..3034769	+	632	152996698	-	Mmwyl1_2685	-	TRAP transporter, 4TM/12TM fusion protein
2656	 42.33	0	3037434..3038033	-	199	152996699	-	Mmwyl1_2686	-	CRISPR-associated Csy4 family protein
2657	 39.30	-1	3038030..3038800	-	256	152996700	-	Mmwyl1_2687	-	hypothetical protein
2658	 42.97	0	3038797..3039906	-	369	152996701	-	Mmwyl1_2688	-	CRISPR-associated RAMP Cmr6 family protein
2659	 44.13	0	3039899..3040324	-	141	152996702	-	Mmwyl1_2689	-	CRISPR-associated Cmr5 family protein
2660	 48.24	+1	3040321..3041172	-	283	152996703	-	Mmwyl1_2690	-	CRISPR-associated RAMP Cmr4 family protein family protein
2661	 49.44	+1	3041187..3042353	-	388	152996704	-	Mmwyl1_2691	-	hypothetical protein
2662	 48.23	+1	3042350..3044188	-	612	152996705	-	Mmwyl1_2692	-	CRISPR-associated RAMP Crm2 family protein
2663	 43.46	0	3044191..3045414	-	407	152996706	-	Mmwyl1_2693	-	CRISPR-associated RAMP Cmr1 family protein
2664	 41.94	0	3045584..3046315	-	243	152996707	-	Mmwyl1_2694	-	hypothetical protein
2665	 44.33	0	3046748..3047047	-	99	152996708	-	Mmwyl1_2695	-	plasmid stabilization system protein
2666	 48.89	+1	3047048..3047317	-	89	152996709	-	Mmwyl1_2696	-	prevent-host-death family protein
2667	 49.94	+2	3047551..3048417	-	288	152996710	-	Mmwyl1_2697	-	xanthine dehydrogenase accessory protein XdhC
2668	 49.53	+1	3048414..3050753	-	779	152996711	-	Mmwyl1_2698	-	xanthine dehydrogenase molybdopterin binding subunit
2669	 46.60	+1	3050746..3052245	-	499	152996712	-	Mmwyl1_2699	-	xanthine dehydrogenase small subunit
2670	 40.70	0	3052711..3053199	+	162	152996713	-	Mmwyl1_2700	-	hypothetical protein
2671	 43.37	0	3053486..3054481	+	331	152996714	-	Mmwyl1_2701	-	NMT1/THI5-like domain-containing protein
2672	 47.85	+1	3054486..3055277	+	263	152996715	-	Mmwyl1_2702	-	ABC transporter related
2673	 46.84	+1	3055255..3056046	+	263	152996716	-	Mmwyl1_2703	-	binding-protein-dependent transport systems inner membrane component
2674	 48.64	+1	3056096..3056572	+	158	152996717	-	Mmwyl1_2704	-	CMP/dCMP deaminase zinc-binding
2675	 45.90	0	3056715..3057701	+	328	152996718	-	Mmwyl1_2705	-	2OG-Fe(II) oxygenase
2676	 36.67	-1	3057885..3058064	+	59	152996719	-	Mmwyl1_2706	-	YcfA family protein
2677	 41.91	0	3058107..3058514	+	135	152996720	-	Mmwyl1_2707	-	hypothetical protein
2678	 46.17	0	3058618..3059139	-	173	152996721	-	Mmwyl1_2708	-	hypothetical protein
2679	 45.87	0	3059333..3059707	+	124	152996722	-	Mmwyl1_2709	-	hydroxyisourate hydrolase
2680	 47.07	+1	3060001..3061179	+	392	152996723	-	Mmwyl1_2710	-	monooxygenase FAD-binding
2681	 45.39	0	3061364..3062284	+	306	152996724	-	Mmwyl1_2711	-	regulatory protein ArsR
2682	 45.92	0	3062584..3064092	+	502	152996725	-	Mmwyl1_2712	-	Alpha-N-arabinofuranosidase
2683	 48.14	+1	3064136..3065236	+	366	152996726	-	Mmwyl1_2713	-	ABC transporter related
2684	 45.24	0	3065238..3066119	+	293	152996727	-	Mmwyl1_2714	-	binding-protein-dependent transport systems inner membrane component
2685	 44.56	0	3066116..3066961	+	281	152996728	-	Mmwyl1_2715	-	binding-protein-dependent transport systems inner membrane component
2686	 43.16	0	3067040..3068341	+	433	152996729	-	Mmwyl1_2716	-	extracellular solute-binding protein
2687	 45.33	0	3068404..3069387	+	327	152996730	-	Mmwyl1_2717	-	aldose 1-epimerase
2688	 42.47	0	3069479..3070561	-	360	152996731	-	Mmwyl1_2718	-	periplasmic binding protein
2689	 40.40	0	3070776..3072743	-	655	152996732	-	Mmwyl1_2719	-	methyl-accepting chemotaxis sensory transducer
2690	 43.29	0	3073158..3073388	-	76	152996733	-	Mmwyl1_2720	-	hypothetical protein
2691	 46.85	+1	3073463..3074239	-	258	152996734	-	Mmwyl1_2721	-	electron transfer flavoprotein alpha/beta-subunit
2692	 44.86	0	3074229..3075503	-	424	152996735	-	Mmwyl1_2722	-	electron transfer flavoprotein alpha subunit
2693	 45.48	0	3075503..3077428	-	641	152996736	-	Mmwyl1_2723	-	hypothetical protein
2694	 45.38	0	3077611..3079677	-	688	152996737	-	Mmwyl1_2724	-	NADH:flavin oxidoreductase/NADH oxidase
2695	 42.67	0	3079774..3080319	-	181	152996738	-	Mmwyl1_2725	-	hypothetical protein
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.