IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2016	 44.89	0	2307610..2309253	+	547	152996059	-	Mmwyl1_2037	-	chaperonin GroEL
2017	 38.59	-1	2309365..2310087	+	240	152996060	-	Mmwyl1_2038	-	diguanylate phosphodiesterase
2018	 41.79	0	2310234..2312468	+	744	152996061	-	Mmwyl1_2039	-	Tfp pilus assembly protein FimV-like protein
2019	 41.70	0	2312461..2313285	+	274	152996062	-	Mmwyl1_2040	-	tRNA pseudouridine synthase A
2020	 42.88	0	2313269..2313886	+	205	152996063	-	Mmwyl1_2041	-	phosphoribosylanthranilate isomerase
2021	 43.40	0	2313879..2315090	+	403	152996064	-	Mmwyl1_2042	-	tryptophan synthase subunit beta
2022	 39.65	-1	2315087..2315893	+	268	152996065	-	Mmwyl1_2043	-	tryptophan synthase, alpha subunit
2023	 41.67	0	2315925..2316788	+	287	152996066	-	Mmwyl1_2044	-	acetyl-CoA carboxylase, carboxyl transferase, beta subunit
2024	 42.56	0	2316793..2318049	+	418	152996067	-	Mmwyl1_2045	-	FolC bifunctional protein
2025	 41.35	0	2318097..2318657	+	186	152996068	-	Mmwyl1_2046	-	sporulation domain-containing protein
2026	 40.07	0	2318733..2319266	+	177	152996069	-	Mmwyl1_2047	-	colicin V production protein
2027	 41.82	0	2319344..2320852	+	502	152996070	-	Mmwyl1_2048	-	amidophosphoribosyltransferase
2028	 43.37	0	2320950..2322125	+	391	152996071	-	Mmwyl1_2049	-	O-succinylhomoserine sulfhydrylase
2029	 43.08	0	2322227..2325436	-	1069	152996072	-	Mmwyl1_2050	-	acriflavin resistance protein
2030	 40.82	0	2325448..2326542	-	364	152996073	-	Mmwyl1_2051	-	RND family efflux transporter MFP subunit
2031	 43.27	0	2326805..2328727	+	640	152996074	-	Mmwyl1_2052	-	ABC transporter related
2032	 44.83	0	2328749..2329357	+	202	152996075	-	Mmwyl1_2053	-	hypothetical protein
2033	 46.94	+1	2329361..2331139	+	592	152996076	-	Mmwyl1_2054	-	heat shock protein 70
2034	 45.35	0	2331143..2333863	+	906	152996077	-	Mmwyl1_2055	-	molecular chaperone
2035	 43.17	0	2334266..2335831	+	521	152996078	-	Mmwyl1_2056	-	extracellular solute-binding protein
2036	 45.33	0	2335848..2336906	+	352	152996079	-	Mmwyl1_2057	-	binding-protein-dependent transport systems inner membrane component
2037	 45.70	0	2336903..2337775	+	290	152996080	-	Mmwyl1_2058	-	binding-protein-dependent transport systems inner membrane component
2038	 44.72	0	2337765..2338616	+	283	152996081	-	Mmwyl1_2059	-	ABC transporter related
2039	 43.23	0	2338613..2339299	+	228	152996082	-	Mmwyl1_2060	-	ABC transporter related
2040	 44.84	0	2339385..2340218	-	277	152996083	-	Mmwyl1_2061	-	ABC transporter related
2041	 46.96	+1	2340215..2341300	-	361	152996084	-	Mmwyl1_2062	-	transport system permease protein
2042	 47.75	+1	2341297..2342316	-	339	152996085	-	Mmwyl1_2063	-	transport system permease protein
2043	 42.46	0	2342334..2343275	-	313	152996086	-	Mmwyl1_2064	-	periplasmic binding protein
2044	 38.87	-1	2343540..2344514	-	324	152996087	-	Mmwyl1_2065	-	lipase class 3
2045	 36.36	-1	2344564..2344893	-	109	152996088	-	Mmwyl1_2066	-	hypothetical protein
2046	 39.98	0	2345052..2345969	-	305	152996089	-	Mmwyl1_2067	-	putative ParB-like nuclease
2047	 39.53	-1	2346100..2346567	+	155	152996090	-	Mmwyl1_2068	-	GCN5-related N-acetyltransferase
2048	 42.78	0	2346649..2347707	-	352	152996091	-	Mmwyl1_2069	-	alcohol dehydrogenase
2049	 43.46	0	2348047..2348658	+	203	152996092	-	Mmwyl1_2070	-	multiple antibiotic resistance (MarC)-related protein
2050	 45.68	0	2348677..2349162	-	161	152996093	-	Mmwyl1_2071	-	regulator of ribonuclease activity A
2051	 45.35	0	2349264..2349779	-	171	152996094	-	Mmwyl1_2072	-	hypothetical protein
2052	 44.07	0	2349817..2350971	+	384	152996095	-	Mmwyl1_2073	-	peptidase M14 carboxypeptidase A
2053	 42.70	0	2350975..2351337	+	120	152996096	-	Mmwyl1_2074	-	MazG nucleotide pyrophosphohydrolase
2054	 41.36	0	2351510..2352082	+	190	152996097	-	Mmwyl1_2075	-	elongation factor P
2055	 41.63	0	2352166..2352948	-	260	152996098	-	Mmwyl1_2076	-	RNA methyltransferase
2056	 46.36	0	2352989..2354293	-	434	152996099	-	Mmwyl1_2077	-	heat shock protein DnaJ domain-containing protein
2057	 37.50	-1	2354397..2356868	-	823	152996100	-	Mmwyl1_2078	-	diguanylate cyclase/phosphodiesterase
2058	 41.20	0	2357030..2357512	+	160	152996101	-	Mmwyl1_2079	-	molybdenum cofactor biosynthesis protein C
2059	 38.82	-1	2357505..2357759	+	84	152996102	-	Mmwyl1_2080	-	thiamineS protein
2060	 42.89	0	2357760..2358209	+	149	152996103	-	Mmwyl1_2081	-	molybdopterin biosynthesis MoaE protein
2061	 41.51	0	2358257..2359504	-	415	152996104	-	Mmwyl1_2082	-	phage integrase family protein
2062	 39.93	0	2359837..2360109	+	90	152996105	-	Mmwyl1_2083	-	hypothetical protein
2063	 37.94	-1	2360162..2360443	+	93	152996106	-	Mmwyl1_2084	-	hypothetical protein
2064	 38.40	-1	2360503..2361924	-	473	152996107	-	Mmwyl1_2085	-	peptidase M48 Ste24p
2065	 39.43	-1	2361960..2362205	+	81	152996108	-	Mmwyl1_2086	-	SirA family protein
2066	 40.58	0	2362218..2363279	+	353	152996109	-	Mmwyl1_2087	-	hypothetical protein
2067	 43.79	0	2363336..2364961	-	541	152996110	-	Mmwyl1_2088	-	alpha amylase catalytic region
2068	 40.48	0	2365152..2366312	+	386	152996111	-	Mmwyl1_2089	-	major facilitator transporter
2069	 39.34	-1	2366343..2367224	-	293	152996112	-	Mmwyl1_2090	-	LysR family transcriptional regulator
2070	 46.01	0	2367318..2368745	+	475	152996113	-	Mmwyl1_2091	-	3-isopropylmalate dehydratase, large subunit
2071	 42.24	0	2368756..2369406	+	216	152996114	-	Mmwyl1_2092	-	3-isopropylmalate dehydratase, small subunit
2072	 43.43	0	2369436..2370515	+	359	152996115	-	Mmwyl1_2093	-	3-isopropylmalate dehydrogenase
2073	 43.70	0	2370594..2371712	+	372	152996116	-	Mmwyl1_2094	-	aspartate-semialdehyde dehydrogenase
2074	 41.15	0	2371878..2372555	+	225	152996117	-	Mmwyl1_2095	-	hypothetical protein
2075	 38.68	-1	2372880..2373272	+	130	152996118	-	Mmwyl1_2096	-	sigma 54 modulation protein/ribosomal protein S30EA
2076	 42.36	0	2373440..2376241	-	933	152996119	-	Mmwyl1_2097	-	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
2077	 43.44	0	2376638..2378398	-	586	152996120	-	Mmwyl1_2098	-	hypothetical protein
2078	 43.95	0	2378487..2379098	+	203	152996121	-	Mmwyl1_2099	-	tRNA--hydroxylase
2079	 41.94	0	2379152..2379523	+	123	152996122	-	Mmwyl1_2100	-	hypothetical protein
2080	 44.75	0	2379652..2381052	-	466	152996123	-	Mmwyl1_2101	-	sodium:neurotransmitter symporter
2081	 41.51	0	2381321..2382103	-	260	152996124	-	Mmwyl1_2102	-	UDP-2,3-diacylglucosamine hydrolase
2082	 41.07	0	2382103..2382606	-	167	152996125	-	Mmwyl1_2103	-	peptidyl-prolyl cis-trans isomerase cyclophilin type
2083	 40.40	0	2382666..2383316	-	216	152996126	-	Mmwyl1_2104	-	hypothetical protein
2084	 39.85	0	2383481..2384140	-	219	152996127	-	Mmwyl1_2105	-	exsB protein
2085	 40.65	0	2384370..2385353	+	327	152996128	-	Mmwyl1_2106	-	GCN5-related N-acetyltransferase
2086	 42.04	0	2385350..2386084	+	244	152996129	-	Mmwyl1_2107	-	AzlC family protein
2087	 42.73	0	2386081..2386410	+	109	152996130	-	Mmwyl1_2108	-	branched-chain amino acid transport
2088	 41.46	0	2386533..2388206	+	557	152996131	-	Mmwyl1_2109	-	glutaminyl-tRNA synthetase
2089	 43.38	0	2388211..2389593	+	460	152996132	-	Mmwyl1_2110	-	cysteinyl-tRNA synthetase
2090	 44.22	0	2389668..2390108	-	146	152996133	-	Mmwyl1_2111	-	UspA domain-containing protein
2091	 41.31	0	2390172..2390660	+	162	152996134	-	Mmwyl1_2112	-	hypothetical protein
2092	 39.58	-1	2390701..2391453	-	250	152996135	-	Mmwyl1_2113	-	hypothetical protein
2093	 42.92	0	2391644..2394271	+	875	152996136	-	Mmwyl1_2114	-	DNA topoisomerase I
2094	 42.89	0	2394268..2394738	+	156	152996137	-	Mmwyl1_2115	-	hypothetical protein
2095	 38.20	-1	2394741..2395007	+	88	152996138	-	Mmwyl1_2116	-	hypothetical protein
2096	 43.91	0	2395103..2395726	-	207	152996139	-	Mmwyl1_2117	-	SOS-response transcriptional repressor, LexA
2097	 41.48	0	2395796..2397919	+	707	152996140	-	Mmwyl1_2118	-	ATP-dependent DNA helicase DinG
2098	 40.99	0	2398028..2399386	+	452	152996141	-	Mmwyl1_2119	-	DEAD/DEAH box helicase domain-containing protein
2099	 44.02	0	2399415..2400836	+	473	152996142	-	Mmwyl1_2120	-	hypothetical protein
2100	 41.50	0	2400886..2401914	+	342	152996143	-	Mmwyl1_2121	-	glycerol-3-phosphate dehydrogenase (NAD(P)(+))
2101	 38.60	-1	2401907..2402191	+	94	152996144	-	Mmwyl1_2122	-	hypothetical protein
2102	 40.62	0	2402178..2402657	+	159	152996145	-	Mmwyl1_2123	-	phosphohistidine phosphatase, SixA
2103	 41.36	0	2402671..2403555	+	294	152996146	-	Mmwyl1_2124	-	alpha/beta hydrolase fold
2104	 40.63	0	2403596..2404390	+	264	152996147	-	Mmwyl1_2125	-	hypothetical protein
2105	 41.53	0	2404406..2405320	+	304	152996148	-	Mmwyl1_2126	-	patatin
2106	 37.98	-1	2405338..2405940	-	200	152996149	-	Mmwyl1_2127	-	maf protein
2107	 40.42	0	2406078..2406599	+	173	152996150	-	Mmwyl1_2128	-	hypothetical protein
2108	 46.67	+1	2406617..2406796	+	59	152996151	-	Mmwyl1_2129	-	ribosomal protein L32
2109	 42.95	0	2406808..2407743	+	311	152996152	-	Mmwyl1_2130	-	fatty acid synthesis plsX protein
2110	 46.65	+1	2407765..2408688	+	307	152996153	-	Mmwyl1_2131	-	malonyl CoA-acyl carrier protein transacylase
2111	 42.86	0	2408746..2409480	+	244	152996154	-	Mmwyl1_2132	-	3-oxoacyl-(acyl-carrier-protein) reductase
2112	 40.17	0	2409614..2409847	+	77	152996155	-	Mmwyl1_2133	-	acyl carrier protein
2113	 42.33	0	2409953..2411197	+	414	152996156	-	Mmwyl1_2134	-	Beta-ketoacyl synthase
2114	 39.46	-1	2411242..2411649	-	135	152996157	-	Mmwyl1_2135	-	hypothetical protein
2115	 38.36	-1	2411711..2412625	+	304	152996158	-	Mmwyl1_2136	-	ABC transporter related
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.