IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1975	 43.52	0	2262146..2262361	-	71	152996018	-	Mmwyl1_1996	-	hypothetical protein
1976	 43.27	0	2262615..2263802	+	395	152996019	-	Mmwyl1_1997	-	magnesium and cobalt transport protein CorA
1977	 48.83	+1	2263855..2264583	+	242	152996020	-	Mmwyl1_1998	-	hypothetical protein
1978	 44.88	0	2264644..2264946	-	100	152996021	-	Mmwyl1_1999	-	hypothetical protein
1979	 44.28	0	2265225..2265626	-	133	152996022	-	Mmwyl1_2000	-	glutathione-dependent formaldehyde-activating GFA
1980	 42.07	0	2265729..2266655	-	308	152996023	-	Mmwyl1_2001	-	LysR family transcriptional regulator
1981	 41.91	0	2266784..2268031	+	415	152996024	-	Mmwyl1_2002	-	diaminopimelate decarboxylase
1982	 41.63	0	2268159..2268869	+	236	152996025	-	Mmwyl1_2003	-	dienelactone hydrolase
1983	 43.83	0	2269188..2270330	+	380	152996026	-	Mmwyl1_2004	-	secretion protein HlyD family protein
1984	 43.42	0	2270333..2271898	+	521	152996027	-	Mmwyl1_2005	-	major facilitator transporter
1985	 44.83	0	2271934..2272881	+	315	152996028	-	Mmwyl1_2006	-	LysR family transcriptional regulator
1986	 45.56	0	2272916..2274019	-	367	152996029	-	Mmwyl1_2007	-	ABC transporter related
1987	 47.25	+1	2274036..2274818	-	260	152996030	-	Mmwyl1_2008	-	transcriptional regulator IclR
1988	 42.81	0	2275023..2275898	+	291	152996031	-	Mmwyl1_2009	-	binding-protein-dependent transport systems inner membrane component
1989	 45.54	0	2275898..2276749	+	283	152996032	-	Mmwyl1_2010	-	binding-protein-dependent transport systems inner membrane component
1990	 47.07	+1	2276754..2278922	+	722	152996033	-	Mmwyl1_2011	-	glycoside hydrolase clan GH-D
1991	 45.52	0	2278915..2279874	+	319	152996034	-	Mmwyl1_2012	-	2-dehydro-3-deoxygalactonokinase
1992	 44.03	0	2279879..2280514	+	211	152996035	-	Mmwyl1_2013	-	KDPG and KHG aldolase
1993	 46.32	0	2280555..2281424	+	289	152996036	-	Mmwyl1_2014	-	SMP-30/gluconolaconase/LRE domain-containing protein
1994	 45.39	0	2281426..2283399	+	657	152996037	-	Mmwyl1_2015	-	Beta-galactosidase
1995	 39.77	0	2283510..2284736	+	408	152996038	-	Mmwyl1_2016	-	extracellular solute-binding protein
1996	 42.81	0	2284956..2286527	+	523	152996039	-	Mmwyl1_2017	-	extracellular solute-binding protein
1997	 45.09	0	2286524..2287459	+	311	152996040	-	Mmwyl1_2018	-	binding-protein-dependent transport systems inner membrane component
1998	 46.23	0	2287456..2288238	+	260	152996041	-	Mmwyl1_2019	-	binding-protein-dependent transport systems inner membrane component
1999	 47.01	+1	2288235..2289623	+	462	152996042	-	Mmwyl1_2020	-	ABC transporter related
2000	 37.88	-1	2289795..2290058	+	87	152996043	-	Mmwyl1_2021	-	hypothetical protein
2001	 38.76	-1	2290180..2293956	+	1258	152996044	-	Mmwyl1_2022	-	multi-sensor hybrid histidine kinase
2002	 39.83	0	2293956..2294894	+	312	152996045	-	Mmwyl1_2023	-	response regulator receiver modulated diguanylate cyclase
2003	 45.58	0	2294994..2296667	-	557	152996046	-	Mmwyl1_2024	-	2-isopropylmalate synthase
2004	 40.72	0	2296879..2297352	+	157	152996047	-	Mmwyl1_2025	-	AsnC family transcriptional regulator
2005	 43.19	0	2297450..2298058	+	202	152996048	-	Mmwyl1_2026	-	GTP cyclohydrolase II
2006	 52.11	+2	2298942..2300459	-	505	152996049	-	Mmwyl1_2027	-	EmrB/QacA family drug resistance transporter
2007	 50.52	+2	2300695..2301363	+	222	152996050	-	Mmwyl1_2028	-	TetR family transcriptional regulator
2008	 45.45	0	2301796..2303049	-	417	152996051	-	Mmwyl1_2029	-	DEAD/DEAH box helicase domain-containing protein
2009	 39.75	0	2303231..2303791	+	186	152996052	-	Mmwyl1_2030	-	hypothetical protein
2010	 39.09	-1	2303871..2304704	+	277	152996053	-	Mmwyl1_2031	-	RNA-binding S1 domain-containing protein
2011	 41.35	0	2304726..2305673	-	315	152996054	-	Mmwyl1_2032	-	2-dehydropantoate 2-reductase
2012	 40.53	0	2305757..2306242	+	161	152996055	-	Mmwyl1_2033	-	hypothetical protein
2013	 38.63	-1	2306286..2306606	-	106	152996056	-	Mmwyl1_2034	-	methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding
2014	 39.38	-1	2306654..2307133	+	159	152996057	-	Mmwyl1_2035	-	FxsA cytoplasmic membrane protein
2015	 43.64	0	2307263..2307553	+	96	152996058	-	Mmwyl1_2036	-	chaperonin Cpn10
2016	 44.89	0	2307610..2309253	+	547	152996059	-	Mmwyl1_2037	-	chaperonin GroEL
2017	 38.59	-1	2309365..2310087	+	240	152996060	-	Mmwyl1_2038	-	diguanylate phosphodiesterase
2018	 41.79	0	2310234..2312468	+	744	152996061	-	Mmwyl1_2039	-	Tfp pilus assembly protein FimV-like protein
2019	 41.70	0	2312461..2313285	+	274	152996062	-	Mmwyl1_2040	-	tRNA pseudouridine synthase A
2020	 42.88	0	2313269..2313886	+	205	152996063	-	Mmwyl1_2041	-	phosphoribosylanthranilate isomerase
2021	 43.40	0	2313879..2315090	+	403	152996064	-	Mmwyl1_2042	-	tryptophan synthase subunit beta
2022	 39.65	-1	2315087..2315893	+	268	152996065	-	Mmwyl1_2043	-	tryptophan synthase, alpha subunit
2023	 41.67	0	2315925..2316788	+	287	152996066	-	Mmwyl1_2044	-	acetyl-CoA carboxylase, carboxyl transferase, beta subunit
2024	 42.56	0	2316793..2318049	+	418	152996067	-	Mmwyl1_2045	-	FolC bifunctional protein
2025	 41.35	0	2318097..2318657	+	186	152996068	-	Mmwyl1_2046	-	sporulation domain-containing protein
2026	 40.07	0	2318733..2319266	+	177	152996069	-	Mmwyl1_2047	-	colicin V production protein
2027	 41.82	0	2319344..2320852	+	502	152996070	-	Mmwyl1_2048	-	amidophosphoribosyltransferase
2028	 43.37	0	2320950..2322125	+	391	152996071	-	Mmwyl1_2049	-	O-succinylhomoserine sulfhydrylase
2029	 43.08	0	2322227..2325436	-	1069	152996072	-	Mmwyl1_2050	-	acriflavin resistance protein
2030	 40.82	0	2325448..2326542	-	364	152996073	-	Mmwyl1_2051	-	RND family efflux transporter MFP subunit
2031	 43.27	0	2326805..2328727	+	640	152996074	-	Mmwyl1_2052	-	ABC transporter related
2032	 44.83	0	2328749..2329357	+	202	152996075	-	Mmwyl1_2053	-	hypothetical protein
2033	 46.94	+1	2329361..2331139	+	592	152996076	-	Mmwyl1_2054	-	heat shock protein 70
2034	 45.35	0	2331143..2333863	+	906	152996077	-	Mmwyl1_2055	-	molecular chaperone
2035	 43.17	0	2334266..2335831	+	521	152996078	-	Mmwyl1_2056	-	extracellular solute-binding protein
2036	 45.33	0	2335848..2336906	+	352	152996079	-	Mmwyl1_2057	-	binding-protein-dependent transport systems inner membrane component
2037	 45.70	0	2336903..2337775	+	290	152996080	-	Mmwyl1_2058	-	binding-protein-dependent transport systems inner membrane component
2038	 44.72	0	2337765..2338616	+	283	152996081	-	Mmwyl1_2059	-	ABC transporter related
2039	 43.23	0	2338613..2339299	+	228	152996082	-	Mmwyl1_2060	-	ABC transporter related
2040	 44.84	0	2339385..2340218	-	277	152996083	-	Mmwyl1_2061	-	ABC transporter related
2041	 46.96	+1	2340215..2341300	-	361	152996084	-	Mmwyl1_2062	-	transport system permease protein
2042	 47.75	+1	2341297..2342316	-	339	152996085	-	Mmwyl1_2063	-	transport system permease protein
2043	 42.46	0	2342334..2343275	-	313	152996086	-	Mmwyl1_2064	-	periplasmic binding protein
2044	 38.87	-1	2343540..2344514	-	324	152996087	-	Mmwyl1_2065	-	lipase class 3
2045	 36.36	-1	2344564..2344893	-	109	152996088	-	Mmwyl1_2066	-	hypothetical protein
2046	 39.98	0	2345052..2345969	-	305	152996089	-	Mmwyl1_2067	-	putative ParB-like nuclease
2047	 39.53	-1	2346100..2346567	+	155	152996090	-	Mmwyl1_2068	-	GCN5-related N-acetyltransferase
2048	 42.78	0	2346649..2347707	-	352	152996091	-	Mmwyl1_2069	-	alcohol dehydrogenase
2049	 43.46	0	2348047..2348658	+	203	152996092	-	Mmwyl1_2070	-	multiple antibiotic resistance (MarC)-related protein
2050	 45.68	0	2348677..2349162	-	161	152996093	-	Mmwyl1_2071	-	regulator of ribonuclease activity A
2051	 45.35	0	2349264..2349779	-	171	152996094	-	Mmwyl1_2072	-	hypothetical protein
2052	 44.07	0	2349817..2350971	+	384	152996095	-	Mmwyl1_2073	-	peptidase M14 carboxypeptidase A
2053	 42.70	0	2350975..2351337	+	120	152996096	-	Mmwyl1_2074	-	MazG nucleotide pyrophosphohydrolase
2054	 41.36	0	2351510..2352082	+	190	152996097	-	Mmwyl1_2075	-	elongation factor P
2055	 41.63	0	2352166..2352948	-	260	152996098	-	Mmwyl1_2076	-	RNA methyltransferase
2056	 46.36	0	2352989..2354293	-	434	152996099	-	Mmwyl1_2077	-	heat shock protein DnaJ domain-containing protein
2057	 37.50	-1	2354397..2356868	-	823	152996100	-	Mmwyl1_2078	-	diguanylate cyclase/phosphodiesterase
2058	 41.20	0	2357030..2357512	+	160	152996101	-	Mmwyl1_2079	-	molybdenum cofactor biosynthesis protein C
2059	 38.82	-1	2357505..2357759	+	84	152996102	-	Mmwyl1_2080	-	thiamineS protein
2060	 42.89	0	2357760..2358209	+	149	152996103	-	Mmwyl1_2081	-	molybdopterin biosynthesis MoaE protein
2061	 41.51	0	2358257..2359504	-	415	152996104	-	Mmwyl1_2082	-	phage integrase family protein
2062	 39.93	0	2359837..2360109	+	90	152996105	-	Mmwyl1_2083	-	hypothetical protein
2063	 37.94	-1	2360162..2360443	+	93	152996106	-	Mmwyl1_2084	-	hypothetical protein
2064	 38.40	-1	2360503..2361924	-	473	152996107	-	Mmwyl1_2085	-	peptidase M48 Ste24p
2065	 39.43	-1	2361960..2362205	+	81	152996108	-	Mmwyl1_2086	-	SirA family protein
2066	 40.58	0	2362218..2363279	+	353	152996109	-	Mmwyl1_2087	-	hypothetical protein
2067	 43.79	0	2363336..2364961	-	541	152996110	-	Mmwyl1_2088	-	alpha amylase catalytic region
2068	 40.48	0	2365152..2366312	+	386	152996111	-	Mmwyl1_2089	-	major facilitator transporter
2069	 39.34	-1	2366343..2367224	-	293	152996112	-	Mmwyl1_2090	-	LysR family transcriptional regulator
2070	 46.01	0	2367318..2368745	+	475	152996113	-	Mmwyl1_2091	-	3-isopropylmalate dehydratase, large subunit
2071	 42.24	0	2368756..2369406	+	216	152996114	-	Mmwyl1_2092	-	3-isopropylmalate dehydratase, small subunit
2072	 43.43	0	2369436..2370515	+	359	152996115	-	Mmwyl1_2093	-	3-isopropylmalate dehydrogenase
2073	 43.70	0	2370594..2371712	+	372	152996116	-	Mmwyl1_2094	-	aspartate-semialdehyde dehydrogenase
2074	 41.15	0	2371878..2372555	+	225	152996117	-	Mmwyl1_2095	-	hypothetical protein
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.