IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1773	 44.06	0	2019895..2020332	-	145	152995816	-	Mmwyl1_1791	-	hypothetical protein
1774	 46.07	0	2020652..2021884	+	410	152995817	-	Mmwyl1_1792	-	aminotransferase class V
1775	 44.69	0	2022215..2022619	-	134	152995818	-	Mmwyl1_1794	-	hypothetical protein
1776	 43.59	0	2022609..2023193	-	194	152995819	-	Mmwyl1_1795	-	hypothetical protein
1777	 45.41	0	2023183..2023770	-	195	152995820	-	Mmwyl1_1796	-	hypothetical protein
1778	 45.26	0	2023763..2026672	-	969	152995821	-	Mmwyl1_1797	-	hypothetical protein
1779	 45.40	0	2026717..2027661	-	314	152995822	-	Mmwyl1_1798	-	hypothetical protein
1780	 43.61	0	2027917..2028909	+	330	152995823	-	Mmwyl1_1799	-	hypothetical protein
1781	 42.18	0	2029009..2029449	+	146	152995824	-	Mmwyl1_1800	-	hypothetical protein
1782	 42.01	0	2029451..2030971	+	506	152995825	-	Mmwyl1_1801	-	hypothetical protein
1783	 44.30	0	2031078..2031761	+	227	152995826	-	Mmwyl1_1802	-	two component transcriptional regulator
1784	 42.76	0	2031724..2033187	+	487	152995827	-	Mmwyl1_1803	-	integral membrane sensor signal transduction histidine kinase
1785	 40.00	0	2033184..2034248	+	354	152995828	-	Mmwyl1_1804	-	ABC-type Fe3+ transport system, periplasmic component
1786	 34.17	-2	2034286..2034882	-	198	152995829	-	Mmwyl1_1805	-	hypothetical protein
1787	 40.03	0	2035112..2035843	-	243	152995830	-	Mmwyl1_1806	-	helix-turn-helix domain-containing protein
1788	 41.23	0	2035993..2036625	+	210	152995831	-	Mmwyl1_1807	-	hypothetical protein
1789	 45.79	0	2036654..2037520	+	288	152995832	-	Mmwyl1_1808	-	hypothetical protein
1790	 40.51	0	2037514..2037945	+	143	152995833	-	Mmwyl1_1809	-	globin
1791	 44.28	0	2038127..2039113	+	328	152995834	-	Mmwyl1_1810	-	permease
1792	 45.02	0	2039141..2039371	+	76	152995835	-	Mmwyl1_1811	-	redox-active disulfide protein 2
1793	 44.74	0	2039507..2039848	+	113	152995836	-	Mmwyl1_1812	-	alkylhydroperoxidase
1794	 45.22	0	2039894..2041231	-	445	152995837	-	Mmwyl1_1813	-	TRAP C4-dicarboxylate transport system permease DctM subunit
1795	 43.37	0	2041224..2041781	-	185	152995838	-	Mmwyl1_1814	-	tripartite ATP-independent periplasmic transporter DctQ
1796	 45.41	0	2041872..2042906	-	344	152995839	-	Mmwyl1_1815	-	TRAP dicarboxylate transporter- DctP subunit
1797	 42.24	0	2043395..2043877	-	160	152995840	-	Mmwyl1_1816	-	MarR family transcriptional regulator
1798	 45.67	0	2044058..2044819	-	253	152995841	-	Mmwyl1_1817	-	class II aldolase/adducin family protein
1799	 46.24	0	2044863..2045846	-	327	152995842	-	Mmwyl1_1818	-	2-dehydropantoate 2-reductase
1800	 47.51	+1	2045931..2046692	-	253	152995843	-	Mmwyl1_1819	-	ABC transporter related
1801	 47.11	+1	2046692..2048491	-	599	152995844	-	Mmwyl1_1820	-	ABC transporter related
1802	 44.99	0	2048492..2049529	-	345	152995845	-	Mmwyl1_1821	-	inner-membrane translocator
1803	 46.77	+1	2049636..2050781	-	381	152995846	-	Mmwyl1_1822	-	extracellular ligand-binding receptor
1804	 46.35	0	2051420..2052610	+	396	152995847	-	Mmwyl1_1823	-	acyl-CoA dehydrogenase type 2
1805	 45.18	0	2052670..2053032	+	120	152995848	-	Mmwyl1_1824	-	hypothetical protein
1806	 45.66	0	2053069..2053587	+	172	152995849	-	Mmwyl1_1825	-	hypothetical protein
1807	 44.88	0	2053642..2054931	+	429	152995850	-	Mmwyl1_1826	-	Rieske (2Fe-2S) domain-containing protein
1808	 44.31	0	2054933..2055415	+	160	152995851	-	Mmwyl1_1827	-	aromatic-ring-hydroxylating dioxygenase beta subunit
1809	 47.75	+1	2055449..2056204	+	251	152995852	-	Mmwyl1_1828	-	short-chain dehydrogenase/reductase SDR
1810	 44.08	0	2056240..2057244	+	334	152995853	-	Mmwyl1_1829	-	ferredoxin
1811	 43.65	0	2057274..2057777	+	167	152995854	-	Mmwyl1_1830	-	flavin reductase domain-containing protein
1812	 46.29	0	2057839..2059011	+	390	152995855	-	Mmwyl1_1831	-	L-lactate dehydrogenase (cytochrome)
1813	 47.60	+1	2059039..2060328	+	429	152995856	-	Mmwyl1_1832	-	amidase
1814	 32.24	-2	2060578..2061402	+	274	152995857	-	Mmwyl1_1833	-	helix-turn-helix domain-containing protein
1815	 44.68	0	2061448..2062857	-	469	152995858	-	Mmwyl1_1834	-	aldehyde dehydrogenase
1816	 34.53	-2	2062996..2063829	-	277	152995859	-	Mmwyl1_1835	-	helix-turn-helix domain-containing protein
1817	 35.46	-2	2063900..2064979	-	359	152995860	-	Mmwyl1_1836	-	methyl-accepting chemotaxis sensory transducer
1818	 44.13	0	2065057..2066436	-	459	152995861	-	Mmwyl1_1837	-	amino acid permease-associated region
1819	 45.40	0	2066469..2067761	-	430	152995862	-	Mmwyl1_1838	-	FAD dependent oxidoreductase
1820	 40.19	0	2067783..2068205	-	140	152995863	-	Mmwyl1_1839	-	endoribonuclease L-PSP
1821	 44.39	0	2068265..2069404	-	379	152995864	-	Mmwyl1_1840	-	ornithine cyclodeaminase
1822	 44.49	0	2069707..2071185	-	492	152995865	-	Mmwyl1_1841	-	RimK domain-containing protein ATP-grasp
1823	 46.68	+1	2071700..2072845	+	381	152995866	-	Mmwyl1_1842	-	GCN5-related N-acetyltransferase
1824	 40.20	0	2072992..2073588	+	198	152995867	-	Mmwyl1_1843	-	GCN5-related N-acetyltransferase
1825	 45.79	0	2073703..2074770	+	355	152995868	-	Mmwyl1_1844	-	threonine aldolase
1826	 45.05	0	2074971..2075909	+	312	152995869	-	Mmwyl1_1845	-	band 7 protein
1827	 42.21	0	2075912..2076373	+	153	152995870	-	Mmwyl1_1846	-	hypothetical protein
1828	 41.89	0	2076518..2076739	+	73	152995871	-	Mmwyl1_1847	-	hypothetical protein
1829	 37.07	-1	2076741..2077034	+	97	152995872	-	Mmwyl1_1848	-	hypothetical protein
1830	 46.45	+1	2077031..2078257	-	408	152995873	-	Mmwyl1_1849	-	major facilitator transporter
1831	 46.83	+1	2078311..2079318	-	335	152995874	-	Mmwyl1_1850	-	glyceraldehyde-3-phosphate dehydrogenase, type I
1832	 44.93	0	2079354..2079698	-	114	152995875	-	Mmwyl1_1851	-	regulatory protein ArsR
1833	 48.24	+1	2079916..2080767	-	283	152995876	-	Mmwyl1_1852	-	UspA domain-containing protein
1834	 44.47	0	2080799..2082289	-	496	152995877	-	Mmwyl1_1853	-	sulphate transporter
1835	 43.16	0	2082694..2098209	+	5171	152995878	-	Mmwyl1_1854	-	hemolysin-type calcium-binding region
1836	 46.82	+1	2098320..2098979	-	219	152995879	-	Mmwyl1_1855	-	peptide methionine sulfoxide reductase
1837	 42.27	0	2100712..2101740	-	342	152995880	-	Mmwyl1_1856	-	periplasmic binding protein/LacI transcriptional regulator
1838	 43.24	0	2101933..2102901	-	322	152995881	-	Mmwyl1_1857	-	periplasmic binding protein/LacI transcriptional regulator
1839	 45.44	0	2103006..2103980	-	324	152995882	-	Mmwyl1_1858	-	monosaccharide-transporting ATPase
1840	 42.87	0	2104080..2105579	-	499	152995883	-	Mmwyl1_1859	-	ABC transporter related
1841	 45.32	0	2105592..2106776	-	394	152995884	-	Mmwyl1_1860	-	oxidoreductase domain-containing protein
1842	 45.74	0	2106789..2107844	-	351	152995885	-	Mmwyl1_1861	-	xylose isomerase domain-containing protein
1843	 43.86	0	2108101..2109363	-	420	152995886	-	Mmwyl1_1862	-	hypothetical protein
1844	 35.41	-2	2109745..2110851	+	368	152995887	-	Mmwyl1_1863	-	diguanylate cyclase
1845	 38.59	-1	2110920..2111414	+	164	152995888	-	Mmwyl1_1864	-	small integral membrane protein
1846	 43.81	0	2111610..2112611	+	333	152995889	-	Mmwyl1_1865	-	D-xylose transporter subunit XylF
1847	 44.44	0	2112669..2114198	+	509	152995890	-	Mmwyl1_1866	-	D-xylose ABC transporter, ATPase subunit
1848	 47.48	+1	2114191..2115321	+	376	152995891	-	Mmwyl1_1867	-	monosaccharide-transporting ATPase
1849	 47.20	+1	2115360..2116808	+	482	152995892	-	Mmwyl1_1868	-	xylulokinase
1850	 44.16	0	2116969..2118150	+	393	152995893	-	Mmwyl1_1869	-	helix-turn-helix domain-containing protein
1851	 44.87	0	2118385..2119398	+	337	152995894	-	Mmwyl1_1870	-	periplasmic binding protein/LacI transcriptional regulator
1852	 43.07	0	2119738..2120682	+	314	152995895	-	Mmwyl1_1871	-	periplasmic binding protein/LacI transcriptional regulator
1853	 43.41	0	2120736..2121350	+	204	152995896	-	Mmwyl1_1872	-	putative lipoprotein
1854	 45.23	0	2121350..2122870	+	506	152995897	-	Mmwyl1_1873	-	ABC transporter related
1855	 45.73	0	2122872..2123936	+	354	152995898	-	Mmwyl1_1874	-	monosaccharide-transporting ATPase
1856	 44.90	0	2123981..2124421	+	146	152995899	-	Mmwyl1_1875	-	RbsD or FucU transport
1857	 45.98	0	2124544..2125863	-	439	152995900	-	Mmwyl1_1876	-	xylose isomerase
1858	 46.33	0	2126034..2126756	-	240	152995901	-	Mmwyl1_1877	-	hypothetical protein
1859	 41.15	0	2127019..2127504	+	161	152995902	-	Mmwyl1_1878	-	GCN5-related N-acetyltransferase
1860	 44.18	0	2127579..2129339	-	586	152995903	-	Mmwyl1_1879	-	TRAP transporter, 4TM/12TM fusion protein
1861	 40.78	0	2129504..2130457	-	317	152995904	-	Mmwyl1_1880	-	TRAP transporter solute receptor TAXI family protein
1862	 44.70	0	2130674..2133418	-	914	152995905	-	Mmwyl1_1881	-	aconitate hydratase 1
1863	 34.63	-2	2133817..2134125	+	102	152995906	-	Mmwyl1_1882	-	hypothetical protein
1864	 35.02	-2	2134207..2135331	-	374	152995907	-	Mmwyl1_1883	-	response regulator receiver protein
1865	 39.44	-1	2135974..2137824	+	616	152995908	-	Mmwyl1_1884	-	hypothetical protein
1866	 40.14	0	2137825..2138103	+	92	152995909	-	Mmwyl1_1885	-	hypothetical protein
1867	 47.68	+1	2138296..2139738	+	480	152995910	-	Mmwyl1_1886	-	monooxygenase FAD-binding
1868	 38.03	-1	2139735..2141288	-	517	152995911	-	Mmwyl1_1887	-	diguanylate cyclase
1869	 45.87	0	2141485..2142441	+	318	152995912	-	Mmwyl1_1888	-	transcription termination factor Rho
1870	 32.59	-2	2142552..2144696	+	714	152995913	-	Mmwyl1_1889	-	diguanylate cyclase
1871	 38.28	-1	2144812..2145276	-	154	152995914	-	Mmwyl1_1890	-	hypothetical protein
1872	 39.58	-1	2145186..2146130	-	314	152995915	-	Mmwyl1_1891	-	peptidase M23B
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.