IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1575	 44.17	0	1778303..1779262	-	319	152995618	-	Mmwyl1_1590	-	periplasmic binding protein/LacI transcriptional regulator
1576	 44.56	0	1779733..1780890	+	385	152995619	-	Mmwyl1_1591	-	monosaccharide-transporting ATPase
1577	 44.36	0	1780944..1781741	+	265	152995620	-	Mmwyl1_1592	-	ABC transporter related
1578	 44.73	0	1781753..1782919	+	388	152995621	-	Mmwyl1_1593	-	oxidoreductase domain-containing protein
1579	 46.20	0	1782916..1784874	+	652	152995622	-	Mmwyl1_1594	-	ribokinase-like domain-containing protein
1580	 47.61	+1	1784874..1786736	+	620	152995623	-	Mmwyl1_1595	-	thiamine pyrophosphate protein central region
1581	 46.73	+1	1786810..1787742	+	310	152995624	-	Mmwyl1_1596	-	xylose isomerase domain-containing protein
1582	 46.48	+1	1787796..1789316	+	506	152995625	-	Mmwyl1_1597	-	methylmalonate-semialdehyde dehydrogenase
1583	 47.55	+1	1789337..1790152	+	271	152995626	-	Mmwyl1_1598	-	myo-inositol catabolism IolB domain-containing protein
1584	 46.15	0	1790309..1791307	+	332	152995627	-	Mmwyl1_1599	-	oxidoreductase domain-containing protein
1585	 40.97	0	1791385..1792458	-	357	152995628	-	Mmwyl1_1600	-	hypothetical protein
1586	 42.27	0	1792598..1793011	-	137	152995629	-	Mmwyl1_1601	-	thioesterase superfamily protein
1587	 48.97	+1	1793113..1794135	-	340	152995630	-	Mmwyl1_1602	-	periplasmic binding protein/LacI transcriptional regulator
1588	 45.28	0	1794132..1794767	-	211	152995631	-	Mmwyl1_1603	-	dual specificity protein phosphatase
1589	 47.42	+1	1794826..1795698	-	290	152995632	-	Mmwyl1_1604	-	inositol-phosphate phosphatase
1590	 47.01	+1	1795794..1796912	-	372	152995633	-	Mmwyl1_1605	-	ABC transporter periplasmic solute-binding protein
1591	 45.74	0	1796937..1798121	-	394	152995634	-	Mmwyl1_1606	-	ABC transporter related
1592	 47.65	+1	1798123..1799952	-	609	152995635	-	Mmwyl1_1607	-	binding-protein-dependent transport systems inner membrane component
1593	 41.67	0	1800137..1800736	+	199	152995636	-	Mmwyl1_1608	-	pentapeptide repeat-containing protein
1594	 44.63	0	1800770..1801309	+	179	152995637	-	Mmwyl1_1609	-	isochorismatase hydrolase
1595	 43.16	0	1801420..1801704	+	94	152995638	-	Mmwyl1_1610	-	hypothetical protein
1596	 46.19	0	1801804..1804215	+	803	152995639	-	Mmwyl1_1611	-	zinc/cadmium/mercury/lead-transporting ATPase
1597	 43.14	0	1804580..1805884	+	434	152995640	-	Mmwyl1_1612	-	L-fucose transporter
1598	 42.00	0	1806043..1806942	+	299	152995641	-	Mmwyl1_1613	-	cupin 2 domain-containing protein
1599	 42.46	0	1807062..1808408	+	448	152995642	-	Mmwyl1_1614	-	sugar (glycoside-Pentoside-hexuronide) transporter
1600	 43.96	0	1808481..1810052	+	523	152995643	-	Mmwyl1_1615	-	glycoside hydrolase family 3 protein
1601	 39.86	0	1810354..1810767	+	137	152995644	-	Mmwyl1_1616	-	GreA/GreB family elongation factor
1602	 41.44	0	1810861..1814871	-	1336	152995645	-	Mmwyl1_1617	-	amino acid adenylation domain-containing protein
1603	 41.73	0	1815044..1816282	-	412	152995646	-	Mmwyl1_1618	-	major facilitator transporter
1604	 39.76	0	1816362..1817201	-	279	152995647	-	Mmwyl1_1619	-	ABC transporter related
1605	 43.02	0	1817205..1818257	-	350	152995648	-	Mmwyl1_1620	-	transport system permease protein
1606	 42.77	0	1818786..1819961	+	391	152995649	-	Mmwyl1_1621	-	isochorismate synthase
1607	 42.26	0	1820406..1821290	+	294	152995650	-	Mmwyl1_1623	-	isochorismatase
1608	 42.16	0	1821287..1822045	+	252	152995651	-	Mmwyl1_1624	-	2,3-dihydroxybenzoate-2,3-dehydrogenase
1609	 42.44	0	1822666..1824906	-	746	152995652	-	Mmwyl1_1625	-	TonB-dependent siderophore receptor
1610	 40.45	0	1825001..1825969	-	322	152995653	-	Mmwyl1_1626	-	periplasmic binding protein
1611	 42.13	0	1825980..1826741	-	253	152995654	-	Mmwyl1_1627	-	ABC transporter related
1612	 40.69	0	1826738..1827688	-	316	152995655	-	Mmwyl1_1628	-	transport system permease protein
1613	 43.84	0	1827685..1828626	-	313	152995656	-	Mmwyl1_1629	-	transport system permease protein
1614	 41.93	0	1828744..1830081	-	445	152995657	-	Mmwyl1_1630	-	L-lysine 6-monooxygenase (NADPH)
1615	 41.71	0	1830115..1833051	-	978	152995658	-	Mmwyl1_1631	-	non-ribosomal peptide synthetase
1616	 43.03	0	1833236..1834843	+	535	152995659	-	Mmwyl1_1632	-	enterobactin synthase subunit E
1617	 42.67	0	1834881..1835780	+	299	152995660	-	Mmwyl1_1633	-	isochorismatase
1618	 41.48	0	1835844..1837709	+	621	152995661	-	Mmwyl1_1634	-	AMP-dependent synthetase and ligase
1619	 47.52	+1	1837781..1839373	-	530	152995662	-	Mmwyl1_1635	-	ABC transporter related
1620	 45.56	0	1839370..1840980	-	536	152995663	-	Mmwyl1_1636	-	ABC transporter related
1621	 41.58	0	1841045..1842196	-	383	152995664	-	Mmwyl1_1637	-	histidine decarboxylase
1622	 39.45	-1	1842604..1844760	+	718	152995665	-	Mmwyl1_1638	-	condensation domain-containing protein
1623	 42.60	0	1844873..1846339	-	488	152995666	-	Mmwyl1_1639	-	hypothetical protein
1624	 37.70	-1	1847006..1847554	-	182	152995667	-	Mmwyl1_1641	-	hypothetical protein
1625	 39.56	-1	1847648..1848868	+	406	152995668	-	Mmwyl1_1642	-	hypothetical protein
1626	 38.87	-1	1848924..1849700	+	258	152995669	-	Mmwyl1_1643	-	hypothetical protein
1627	 34.94	-2	1849733..1852102	+	789	152995670	-	Mmwyl1_1644	-	PAS/PAC sensor hybrid histidine kinase
1628	 38.62	-1	1852108..1853034	+	308	152995671	-	Mmwyl1_1645	-	response regulator receiver modulated diguanylate cyclase
1629	 43.27	0	1853075..1854403	+	442	152995672	-	Mmwyl1_1646	-	hypothetical protein
1630	 47.35	+1	1854501..1855256	-	251	152995673	-	Mmwyl1_1647	-	GntR family transcriptional regulator
1631	 44.53	0	1855327..1856442	-	371	152995674	-	Mmwyl1_1648	-	ABC transporter related
1632	 44.56	0	1856477..1857340	-	287	152995675	-	Mmwyl1_1649	-	binding-protein-dependent transport systems inner membrane component
1633	 41.88	0	1857351..1858286	-	311	152995676	-	Mmwyl1_1650	-	binding-protein-dependent transport systems inner membrane component
1634	 43.85	0	1858372..1859655	-	427	152995677	-	Mmwyl1_1651	-	extracellular solute-binding protein
1635	 44.32	0	1859879..1860679	+	266	152995678	-	Mmwyl1_1652	-	glucosamine-6-phosphate isomerase
1636	 45.24	0	1860676..1861557	+	293	152995679	-	Mmwyl1_1653	-	ATPase BadF/BadG/BcrA/BcrD type
1637	 43.62	0	1861554..1862720	+	388	152995680	-	Mmwyl1_1654	-	N-acetylglucosamine-6-phosphate deacetylase
1638	 39.52	-1	1862928..1863137	+	69	152995681	-	Mmwyl1_1655	-	cold-shock DNA-binding domain-containing protein
1639	 42.28	0	1863426..1863995	+	189	152995682	-	Mmwyl1_1656	-	beta-Ig-H3/fasciclin
1640	 41.99	0	1864108..1865031	-	307	152995683	-	Mmwyl1_1657	-	hypothetical protein
1641	 45.75	0	1865129..1866046	+	305	152995684	-	Mmwyl1_1658	-	LysR family transcriptional regulator
1642	 44.06	0	1866033..1866815	-	260	152995685	-	Mmwyl1_1659	-	methionine aminopeptidase, type I
1643	 42.67	0	1866817..1867041	-	74	152995686	-	Mmwyl1_1660	-	hypothetical protein
1644	 45.67	0	1867109..1867894	-	261	152995687	-	Mmwyl1_1661	-	tryptophan synthase, alpha subunit
1645	 46.86	+1	1867891..1869147	-	418	152995688	-	Mmwyl1_1662	-	tryptophan synthase subunit beta
1646	 44.44	0	1869377..1869961	+	194	152995689	-	Mmwyl1_1663	-	TetR family transcriptional regulator
1647	 42.35	0	1870011..1871252	-	413	152995690	-	Mmwyl1_1664	-	Bcr/CflA subfamily drug resistance transporter
1648	 35.06	-2	1871616..1872137	+	173	152995691	-	Mmwyl1_1665	-	GCN5-related N-acetyltransferase
1649	 42.68	0	1872223..1873527	+	434	152995692	-	Mmwyl1_1666	-	hypothetical protein
1650	 46.20	0	1873520..1874467	+	315	152995693	-	Mmwyl1_1667	-	formyl transferase domain-containing protein
1651	 46.19	0	1874511..1875101	+	196	152995694	-	Mmwyl1_1668	-	phage tail collar domain-containing protein
1652	 46.86	+1	1875178..1875798	+	206	152995695	-	Mmwyl1_1669	-	phage tail collar domain-containing protein
1653	 45.73	0	1876176..1877756	+	526	152995696	-	Mmwyl1_1670	-	outer membrane efflux protein
1654	 46.50	+1	1877756..1878484	+	242	152995697	-	Mmwyl1_1671	-	AcrA-like protein
1655	 47.88	+1	1878593..1888768	+	3391	152995698	-	Mmwyl1_1672	-	beta strand repeat-containing protein
1656	 42.73	0	1888772..1890112	+	446	152995699	-	Mmwyl1_1673	-	hypothetical protein
1657	 40.53	0	1890113..1892224	+	703	152995700	-	Mmwyl1_1674	-	peptidase M50
1658	 40.61	0	1892270..1893094	+	274	152995701	-	Mmwyl1_1675	-	hypothetical protein
1659	 42.06	0	1893084..1893587	+	167	152995702	-	Mmwyl1_1676	-	hypothetical protein
1660	 44.39	0	1893902..1895203	-	433	152995703	-	Mmwyl1_1677	-	guanine deaminase
1661	 43.25	0	1895292..1895654	-	120	152995704	-	Mmwyl1_1678	-	hypothetical protein
1662	 43.89	0	1895651..1896967	-	438	152995705	-	Mmwyl1_1679	-	DEAD/DEAH box helicase domain-containing protein
1663	 39.76	0	1897210..1899543	+	777	152995706	-	Mmwyl1_1680	-	diguanylate cyclase/phosphodiesterase
1664	 41.35	0	1899605..1900540	-	311	152995707	-	Mmwyl1_1681	-	LysR family transcriptional regulator
1665	 44.21	0	1900593..1901603	-	336	152995708	-	Mmwyl1_1682	-	oligopeptide/dipeptide ABC transporter, ATPase subunit
1666	 44.64	0	1901603..1902601	-	332	152995709	-	Mmwyl1_1683	-	oligopeptide/dipeptide ABC transporter, ATPase subunit
1667	 43.13	0	1902659..1903597	-	312	152995710	-	Mmwyl1_1684	-	binding-protein-dependent transport systems inner membrane component
1668	 41.49	0	1903594..1904574	-	326	152995711	-	Mmwyl1_1685	-	binding-protein-dependent transport systems inner membrane component
1669	 40.52	0	1904650..1906194	-	514	152995712	-	Mmwyl1_1686	-	extracellular solute-binding protein
1670	 41.83	0	1906369..1906968	+	199	152995713	-	Mmwyl1_1687	-	hypothetical protein
1671	 44.15	0	1907248..1908273	+	341	152995714	-	Mmwyl1_1688	-	GTP-binding protein HSR1-related
1672	 39.90	0	1908288..1908668	+	126	152995715	-	Mmwyl1_1689	-	hypothetical protein
1673	 42.17	0	1908756..1909355	+	199	152995716	-	Mmwyl1_1690	-	hypothetical protein
1674	 41.95	0	1909562..1911916	+	784	152995717	-	Mmwyl1_1691	-	fatty acid cistrans isomerase
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.