IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1503	 50.20	+2	1700273..1701037	+	254	152995546	-	Mmwyl1_1518	-	short chain dehydrogenase
1504	 51.13	+2	1701051..1701893	+	280	152995547	-	Mmwyl1_1519	-	methylated-DNA--protein-cysteine methyltransferase
1505	 47.27	+1	1702214..1702744	+	176	152995548	-	Mmwyl1_1520	-	XRE family transcriptional regulator
1506	 46.47	+1	1702741..1703463	+	240	152995549	-	Mmwyl1_1521	-	AzlC family protein
1507	 46.78	+1	1703466..1703807	+	113	152995550	-	Mmwyl1_1522	-	branched-chain amino acid transport
1508	 42.03	0	1704085..1704774	+	229	152995551	-	Mmwyl1_1523	-	hypothetical protein
1509	 42.73	0	1704924..1705370	+	148	152995552	-	Mmwyl1_1524	-	thioredoxin
1510	 46.90	+1	1705395..1705652	-	85	152995553	-	Mmwyl1_1525	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
1511	 47.08	+1	1705660..1707048	-	462	152995554	-	Mmwyl1_1526	-	peptidase U32
1512	 43.12	0	1707244..1709388	-	714	152995555	-	Mmwyl1_1527	-	TonB-dependent siderophore receptor
1513	 34.87	-2	1709604..1709864	-	86	152995556	-	Mmwyl1_1528	-	hypothetical protein
1514	 40.90	0	1710183..1713434	-	1083	152995557	-	Mmwyl1_1529	-	hypothetical protein
1515	 44.04	0	1713479..1713973	-	164	152995558	-	Mmwyl1_1530	-	hypothetical protein
1516	 42.75	0	1714043..1714711	-	222	152995559	-	Mmwyl1_1531	-	ribonuclease T
1517	 44.00	0	1714807..1715697	+	296	152995560	-	Mmwyl1_1532	-	OmpA/MotB domain-containing protein
1518	 44.36	0	1715900..1717132	+	410	152995561	-	Mmwyl1_1533	-	argininosuccinate synthase
1519	 43.85	0	1717318..1718211	+	297	152995562	-	Mmwyl1_1534	-	ribokinase-like domain-containing protein
1520	 44.06	0	1718258..1719199	+	313	152995563	-	Mmwyl1_1535	-	inosine/uridine-preferring nucleoside hydrolase
1521	 37.14	-1	1719232..1719546	+	104	152995564	-	Mmwyl1_1536	-	RNP-1 like RNA-binding protein
1522	 39.16	-1	1719619..1720116	-	165	152995565	-	Mmwyl1_1537	-	hypothetical protein
1523	 45.48	0	1720127..1721452	-	441	152995566	-	Mmwyl1_1538	-	beta alanine--pyruvate transaminase
1524	 45.28	0	1721575..1722210	-	211	152995567	-	Mmwyl1_1539	-	endonuclease III
1525	 47.27	+1	1722282..1723049	-	255	152995568	-	Mmwyl1_1540	-	SoxR-reducing system protein RsxE
1526	 44.98	0	1723059..1723676	-	205	152995569	-	Mmwyl1_1541	-	electron transport complex, RnfABCDGE type, G subunit
1527	 47.78	+1	1723676..1724734	-	352	152995570	-	Mmwyl1_1542	-	electron transport complex, RnfABCDGE type, D subunit
1528	 46.20	0	1724735..1727680	-	981	152995571	-	Mmwyl1_1543	-	electron transport complex, RnfABCDGE type, C subunit
1529	 48.91	+1	1727680..1728276	-	198	152995572	-	Mmwyl1_1544	-	electron transport complex, RnfABCDGE type, B subunit
1530	 44.85	0	1728286..1728867	-	193	152995573	-	Mmwyl1_1545	-	electron transport complex, RnfABCDGE type, A subunit
1531	 46.49	+1	1729159..1731195	-	678	152995574	-	Mmwyl1_1546	-	methionyl-tRNA synthetase
1532	 47.06	+1	1731476..1732546	+	356	152995575	-	Mmwyl1_1547	-	ParA family protein
1533	 49.74	+1	1732556..1733140	+	194	152995576	-	Mmwyl1_1548	-	deoxycytidine triphosphate deaminase
1534	 44.94	0	1733734..1734543	-	269	152995577	-	Mmwyl1_1549	-	integrase catalytic region
1535	 46.08	0	1734588..1734893	-	101	152995578	-	Mmwyl1_1550	-	transposase IS3/IS911 family protein
1536	 37.17	-1	1735583..1736311	+	242	152995579	-	Mmwyl1_1551	-	hypothetical protein
1537	 29.92	-2	1736312..1737307	+	331	152995580	-	Mmwyl1_1552	-	hypothetical protein
1538	 43.31	0	1738299..1738829	+	176	152995581	-	Mmwyl1_1553	-	NUDIX hydrolase
1539	 43.40	0	1738858..1739304	+	148	152995582	-	Mmwyl1_1554	-	hypothetical protein
1540	 47.93	+1	1739411..1740136	-	241	152995583	-	Mmwyl1_1555	-	hypothetical protein
1541	 40.22	0	1740353..1740628	+	91	152995584	-	Mmwyl1_1556	-	hypothetical protein
1542	 44.37	0	1740779..1741657	+	292	152995585	-	Mmwyl1_1557	-	diguanylate cyclase with PAS/PAC sensor
1543	 45.55	0	1741933..1742931	+	332	152995586	-	Mmwyl1_1558	-	branched-chain amino acid aminotransferase
1544	 43.04	0	1743012..1743557	-	181	152995587	-	Mmwyl1_1559	-	hypothetical protein
1545	 40.00	0	1743750..1744034	+	94	152995588	-	Mmwyl1_1560	-	hypothetical protein
1546	 41.72	0	1744100..1744600	-	166	152995589	-	Mmwyl1_1561	-	periplasmic repressor CpxP
1547	 42.21	0	1744822..1745508	+	228	152995590	-	Mmwyl1_1562	-	two component transcriptional regulator
1548	 43.84	0	1745508..1746896	+	462	152995591	-	Mmwyl1_1563	-	two-component sensor protein
1549	 36.49	-1	1747196..1747417	+	73	152995592	-	Mmwyl1_1564	-	hypothetical protein
1550	 38.58	-1	1747439..1748182	-	247	152995593	-	Mmwyl1_1565	-	methyltransferase type 11
1551	 43.93	0	1748313..1749605	-	430	152995594	-	Mmwyl1_1566	-	xanthine/uracil/vitamin C permease
1552	 41.11	0	1749885..1750745	-	286	152995595	-	Mmwyl1_1567	-	GumN family protein
1553	 42.00	0	1750965..1751495	+	176	152995596	-	Mmwyl1_1568	-	tRNA/rRNA methyltransferase (SpoU)
1554	 38.89	-1	1751727..1752482	+	251	152995597	-	Mmwyl1_1569	-	hypothetical protein
1555	 42.13	0	1752495..1753517	+	340	152995598	-	Mmwyl1_1570	-	cobalamin synthesis protein P47K
1556	 44.85	0	1753731..1755536	+	601	152995599	-	Mmwyl1_1571	-	acyl-CoA dehydrogenase domain-containing protein
1557	 40.63	0	1755615..1755929	+	104	152995600	-	Mmwyl1_1572	-	sterol-binding domain-containing protein
1558	 41.46	0	1756162..1757859	+	565	152995601	-	Mmwyl1_1573	-	AMP-dependent synthetase and ligase
1559	 44.74	0	1757902..1758462	+	186	152995602	-	Mmwyl1_1574	-	hypothetical protein
1560	 42.36	0	1758462..1759214	+	250	152995603	-	Mmwyl1_1575	-	enoyl-CoA hydratase/isomerase
1561	 44.22	0	1759528..1760280	+	250	152995604	-	Mmwyl1_1576	-	electron transfer flavoprotein alpha/beta-subunit
1562	 44.52	0	1760277..1761206	+	309	152995605	-	Mmwyl1_1577	-	electron transfer flavoprotein alpha subunit
1563	 43.56	0	1761327..1763477	+	716	152995606	-	Mmwyl1_1578	-	multifunctional fatty acid oxidation complex subunit alpha
1564	 46.77	+1	1763505..1764680	+	391	152995607	-	Mmwyl1_1579	-	3-ketoacyl-CoA thiolase
1565	 41.80	0	1764861..1765829	+	322	152995608	-	Mmwyl1_1580	-	D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
1566	 38.30	-1	1765965..1766387	+	140	152995609	-	Mmwyl1_1581	-	hypothetical protein
1567	 39.57	-1	1766480..1768516	-	678	152995610	-	Mmwyl1_1582	-	methyl-accepting chemotaxis sensory transducer
1568	 44.63	0	1768714..1769970	-	418	152995611	-	Mmwyl1_1583	-	N-isopropylammelide isopropylaminohydrolase
1569	 44.58	0	1770274..1771527	-	417	152995612	-	Mmwyl1_1584	-	cytosine permease
1570	 46.34	0	1771894..1774107	+	737	152995613	-	Mmwyl1_1585	-	catalase/peroxidase HPI
1571	 40.72	0	1774362..1776242	+	626	152995614	-	Mmwyl1_1586	-	methyl-accepting chemotaxis sensory transducer
1572	 39.32	-1	1776413..1776880	+	155	152995615	-	Mmwyl1_1587	-	hypothetical protein
1573	 41.67	0	1776896..1777315	+	139	152995616	-	Mmwyl1_1588	-	GCN5-related N-acetyltransferase
1574	 43.32	0	1777312..1778172	-	286	152995617	-	Mmwyl1_1589	-	RpiR family transcriptional regulator
1575	 44.17	0	1778303..1779262	-	319	152995618	-	Mmwyl1_1590	-	periplasmic binding protein/LacI transcriptional regulator
1576	 44.56	0	1779733..1780890	+	385	152995619	-	Mmwyl1_1591	-	monosaccharide-transporting ATPase
1577	 44.36	0	1780944..1781741	+	265	152995620	-	Mmwyl1_1592	-	ABC transporter related
1578	 44.73	0	1781753..1782919	+	388	152995621	-	Mmwyl1_1593	-	oxidoreductase domain-containing protein
1579	 46.20	0	1782916..1784874	+	652	152995622	-	Mmwyl1_1594	-	ribokinase-like domain-containing protein
1580	 47.61	+1	1784874..1786736	+	620	152995623	-	Mmwyl1_1595	-	thiamine pyrophosphate protein central region
1581	 46.73	+1	1786810..1787742	+	310	152995624	-	Mmwyl1_1596	-	xylose isomerase domain-containing protein
1582	 46.48	+1	1787796..1789316	+	506	152995625	-	Mmwyl1_1597	-	methylmalonate-semialdehyde dehydrogenase
1583	 47.55	+1	1789337..1790152	+	271	152995626	-	Mmwyl1_1598	-	myo-inositol catabolism IolB domain-containing protein
1584	 46.15	0	1790309..1791307	+	332	152995627	-	Mmwyl1_1599	-	oxidoreductase domain-containing protein
1585	 40.97	0	1791385..1792458	-	357	152995628	-	Mmwyl1_1600	-	hypothetical protein
1586	 42.27	0	1792598..1793011	-	137	152995629	-	Mmwyl1_1601	-	thioesterase superfamily protein
1587	 48.97	+1	1793113..1794135	-	340	152995630	-	Mmwyl1_1602	-	periplasmic binding protein/LacI transcriptional regulator
1588	 45.28	0	1794132..1794767	-	211	152995631	-	Mmwyl1_1603	-	dual specificity protein phosphatase
1589	 47.42	+1	1794826..1795698	-	290	152995632	-	Mmwyl1_1604	-	inositol-phosphate phosphatase
1590	 47.01	+1	1795794..1796912	-	372	152995633	-	Mmwyl1_1605	-	ABC transporter periplasmic solute-binding protein
1591	 45.74	0	1796937..1798121	-	394	152995634	-	Mmwyl1_1606	-	ABC transporter related
1592	 47.65	+1	1798123..1799952	-	609	152995635	-	Mmwyl1_1607	-	binding-protein-dependent transport systems inner membrane component
1593	 41.67	0	1800137..1800736	+	199	152995636	-	Mmwyl1_1608	-	pentapeptide repeat-containing protein
1594	 44.63	0	1800770..1801309	+	179	152995637	-	Mmwyl1_1609	-	isochorismatase hydrolase
1595	 43.16	0	1801420..1801704	+	94	152995638	-	Mmwyl1_1610	-	hypothetical protein
1596	 46.19	0	1801804..1804215	+	803	152995639	-	Mmwyl1_1611	-	zinc/cadmium/mercury/lead-transporting ATPase
1597	 43.14	0	1804580..1805884	+	434	152995640	-	Mmwyl1_1612	-	L-fucose transporter
1598	 42.00	0	1806043..1806942	+	299	152995641	-	Mmwyl1_1613	-	cupin 2 domain-containing protein
1599	 42.46	0	1807062..1808408	+	448	152995642	-	Mmwyl1_1614	-	sugar (glycoside-Pentoside-hexuronide) transporter
1600	 43.96	0	1808481..1810052	+	523	152995643	-	Mmwyl1_1615	-	glycoside hydrolase family 3 protein
1601	 39.86	0	1810354..1810767	+	137	152995644	-	Mmwyl1_1616	-	GreA/GreB family elongation factor
1602	 41.44	0	1810861..1814871	-	1336	152995645	-	Mmwyl1_1617	-	amino acid adenylation domain-containing protein
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.