IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1399	 46.05	0	1584520..1585164	+	214	152995442	-	Mmwyl1_1413	-	cob(I)alamin adenosyltransferase
1400	 41.67	0	1585379..1585822	+	147	152995443	-	Mmwyl1_1414	-	hypothetical protein
1401	 39.92	0	1586064..1586579	+	171	152995444	-	Mmwyl1_1415	-	superoxide dismutase Ni-type
1402	 41.58	0	1586602..1586904	+	100	152995445	-	Mmwyl1_1416	-	putative phage repressor
1403	 38.65	-1	1587043..1587663	+	206	152995446	-	Mmwyl1_1417	-	hypothetical protein
1404	 42.61	0	1587828..1588883	-	351	152995447	-	Mmwyl1_1418	-	iron-containing alcohol dehydrogenase
1405	 42.76	0	1589141..1590445	-	434	152995448	-	Mmwyl1_1419	-	short chain fatty acid transporter
1406	 42.94	0	1590883..1591413	+	176	152995449	-	Mmwyl1_1420	-	GCN5-related N-acetyltransferase
1407	 42.46	0	1591444..1592133	+	229	152995450	-	Mmwyl1_1421	-	pseudouridine synthase
1408	 45.16	0	1592146..1592517	+	123	152995451	-	Mmwyl1_1422	-	hypothetical protein
1409	 42.86	0	1592712..1593341	+	209	152995452	-	Mmwyl1_1423	-	TetR family transcriptional regulator
1410	 43.16	0	1593348..1596806	-	1152	152995453	-	Mmwyl1_1424	-	multi-sensor hybrid histidine kinase
1411	 44.90	0	1597031..1597393	+	120	152995454	-	Mmwyl1_1425	-	DOPA 45-dioxygenase
1412	 43.97	0	1597435..1597857	+	140	152995455	-	Mmwyl1_1426	-	GCN5-related N-acetyltransferase
1413	 46.17	0	1598159..1598641	+	160	152995456	-	Mmwyl1_1427	-	peptidylprolyl isomerase FKBP-type
1414	 38.66	-1	1598855..1599643	+	262	152995457	-	Mmwyl1_1428	-	hypothetical protein
1415	 44.98	0	1599704..1600330	+	208	152995458	-	Mmwyl1_1429	-	uracil-DNA glycosylase superfamily protein
1416	 40.81	0	1600299..1600766	-	155	152995459	-	Mmwyl1_1430	-	GCN5-related N-acetyltransferase
1417	 39.90	0	1600926..1601732	+	268	152995460	-	Mmwyl1_1431	-	PhzF family phenazine biosynthesis protein
1418	 37.85	-1	1601801..1601977	+	58	152995461	-	Mmwyl1_1432	-	hypothetical protein
1419	 38.92	-1	1602075..1602593	+	172	152995462	-	Mmwyl1_1433	-	hypothetical protein
1420	 37.45	-1	1602780..1603022	-	80	152995463	-	Mmwyl1_1434	-	hypothetical protein
1421	 41.35	0	1603177..1603650	-	157	152995464	-	Mmwyl1_1435	-	AsnC family transcriptional regulator
1422	 45.06	0	1603803..1605038	+	411	152995465	-	Mmwyl1_1436	-	aminotransferase class V
1423	 47.03	+1	1605091..1605747	-	218	152995466	-	Mmwyl1_1437	-	cob(II)yrinic acid a,c-diamide reductase
1424	 44.51	0	1605839..1606366	-	175	152995467	-	Mmwyl1_1438	-	hypothetical protein
1425	 45.56	0	1606468..1608234	-	588	152995468	-	Mmwyl1_1439	-	Na+ symporter
1426	 43.68	0	1608240..1608500	-	86	152995469	-	Mmwyl1_1440	-	hypothetical protein
1427	 38.41	-1	1608864..1609316	+	150	152995470	-	Mmwyl1_1441	-	glyoxalase/bleomycin resistance protein/dioxygenase
1428	 42.14	0	1609442..1609918	+	158	152995471	-	Mmwyl1_1442	-	MOSC domain-containing protein
1429	 45.46	0	1609947..1611620	-	557	152995472	-	Mmwyl1_1443	-	aminotransferase class V
1430	 43.52	0	1611668..1612138	-	156	152995473	-	Mmwyl1_1444	-	AsnC family transcriptional regulator
1431	 44.52	0	1612450..1613316	+	288	152995474	-	Mmwyl1_1445	-	hypothetical protein
1432	 42.90	0	1613498..1614709	+	403	152995475	-	Mmwyl1_1446	-	cobalamin synthesis protein P47K
1433	 42.77	0	1614777..1617977	-	1066	152995476	-	Mmwyl1_1447	-	acriflavin resistance protein
1434	 43.87	0	1617977..1619143	-	388	152995477	-	Mmwyl1_1448	-	RND family efflux transporter MFP subunit
1435	 43.91	0	1619140..1620519	-	459	152995478	-	Mmwyl1_1449	-	RND efflux system outer membrane lipoprotein
1436	 44.55	0	1620681..1622195	-	504	152995479	-	Mmwyl1_1450	-	GntR family transcriptional regulator
1437	 43.02	0	1622576..1623184	+	202	152995480	-	Mmwyl1_1451	-	lysine exporter protein LysE/YggA
1438	 41.00	0	1623207..1623545	+	112	152995481	-	Mmwyl1_1452	-	excinuclease ABC subunit C
1439	 42.26	0	1623629..1624009	+	126	152995482	-	Mmwyl1_1453	-	glyoxalase/bleomycin resistance protein/dioxygenase
1440	 35.56	-2	1624141..1625265	+	374	152995483	-	Mmwyl1_1454	-	glycosyl transferase group 1
1441	 43.25	0	1625313..1627268	-	651	152995484	-	Mmwyl1_1455	-	ATP-dependent DNA helicase RecQ
1442	 40.97	0	1627265..1628272	-	335	152995485	-	Mmwyl1_1456	-	serine/threonine protein kinase
1443	 41.39	0	1628364..1629629	-	421	152995486	-	Mmwyl1_1457	-	response regulator receiver protein
1444	 39.17	-1	1629911..1631161	-	416	152995487	-	Mmwyl1_1458	-	response regulator receiver protein
1445	 39.63	-1	1631334..1631984	-	216	152995488	-	Mmwyl1_1459	-	hypothetical protein
1446	 42.87	0	1632376..1633980	+	534	152995489	-	Mmwyl1_1460	-	methyl-accepting chemotaxis sensory transducer
1447	 45.76	0	1634070..1635887	+	605	152995490	-	Mmwyl1_1461	-	lipid ABC transporter ATPase/inner membrane protein
1448	 43.04	0	1635884..1637923	-	679	152995491	-	Mmwyl1_1462	-	glycogen debranching enzyme GlgX
1449	 44.35	0	1637986..1640181	-	731	152995492	-	Mmwyl1_1463	-	1,4-alpha-glucan branching enzyme
1450	 43.67	0	1640208..1643333	-	1041	152995493	-	Mmwyl1_1464	-	phosphorylase kinase alphabeta
1451	 43.10	0	1643684..1645300	-	538	152995494	-	Mmwyl1_1465	-	methyl-accepting chemotaxis sensory transducer
1452	 38.85	-1	1645499..1645933	+	144	152995495	-	Mmwyl1_1466	-	hypothetical protein
1453	 41.32	0	1646001..1646714	+	237	152995496	-	Mmwyl1_1467	-	sporulation domain-containing protein
1454	 39.47	-1	1646814..1648166	-	450	152995497	-	Mmwyl1_1468	-	hypothetical protein
1455	 43.08	0	1648388..1649659	-	423	152995498	-	Mmwyl1_1469	-	TRAP dicarboxylate transporter, DctM subunit
1456	 41.67	0	1649659..1650222	-	187	152995499	-	Mmwyl1_1470	-	tripartite ATP-independent periplasmic transporter DctQ
1457	 40.10	0	1650292..1651281	-	329	152995500	-	Mmwyl1_1471	-	TRAP dicarboxylate transporter- DctP subunit
1458	 44.00	0	1651345..1652310	-	321	152995501	-	Mmwyl1_1472	-	pyruvate carboxyltransferase
1459	 45.63	0	1652320..1653555	-	411	152995502	-	Mmwyl1_1473	-	L-carnitine dehydratase/bile acid-inducible protein F
1460	 44.37	0	1653677..1654564	-	295	152995503	-	Mmwyl1_1474	-	LysR family transcriptional regulator
1461	 41.12	0	1654753..1655433	+	226	152995504	-	Mmwyl1_1475	-	hypothetical protein
1462	 49.62	+1	1655473..1656270	-	265	152995505	-	Mmwyl1_1476	-	transglutaminase domain-containing protein
1463	 41.18	0	1656555..1657943	+	462	152995506	-	Mmwyl1_1477	-	MATE efflux family protein
1464	 46.88	+1	1658164..1659027	-	287	152995507	-	Mmwyl1_1478	-	LysR family transcriptional regulator
1465	 46.02	0	1659165..1659566	+	133	152995508	-	Mmwyl1_1479	-	carboxymuconolactone decarboxylase
1466	 47.65	+1	1659647..1661260	-	537	152995509	-	Mmwyl1_1480	-	FAD dependent oxidoreductase
1467	 43.60	0	1661483..1662310	+	275	152995510	-	Mmwyl1_1481	-	5'-nucleotidase
1468	 44.12	0	1662404..1663840	-	478	152995511	-	Mmwyl1_1482	-	sodium/sulphate symporter
1469	 45.05	0	1663915..1664853	-	312	152995512	-	Mmwyl1_1483	-	N-acetyl-gamma-glutamyl-phosphate reductase
1470	 43.49	0	1665019..1666239	-	406	152995513	-	Mmwyl1_1484	-	major facilitator transporter
1471	 40.38	0	1666415..1666783	+	122	152995514	-	Mmwyl1_1485	-	putative transcriptional regulator, fis family protein
1472	 42.05	0	1666826..1668694	-	622	152995515	-	Mmwyl1_1486	-	sodium/hydrogen exchanger
1473	 39.39	-1	1668796..1669323	-	175	152995516	-	Mmwyl1_1487	-	protoporphyrinogen oxidase
1474	 41.10	0	1669513..1670490	-	325	152995517	-	Mmwyl1_1488	-	GTPase EngC
1475	 42.88	0	1670782..1671891	-	369	152995518	-	Mmwyl1_1489	-	agmatine deiminase
1476	 42.49	0	1672356..1672628	+	90	152995519	-	Mmwyl1_1490	-	hypothetical protein
1477	 40.74	0	1672696..1674045	-	449	152995520	-	Mmwyl1_1491	-	sigma-54 dependent trancsriptional regulator
1478	 39.32	-1	1674201..1674668	+	155	152995521	-	Mmwyl1_1492	-	hypothetical protein
1479	 38.66	-1	1674747..1675553	-	268	152995522	-	Mmwyl1_1493	-	hypothetical protein
1480	 45.67	0	1675752..1676513	-	253	152995523	-	Mmwyl1_1494	-	phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
1481	 45.17	0	1676654..1677067	+	137	152995524	-	Mmwyl1_1495	-	class I peptide chain release factor
1482	 45.23	0	1677174..1678451	+	425	152995525	-	Mmwyl1_1496	-	O-acetylhomoserine/O-acetylserine sulfhydrylase
1483	 43.47	0	1678918..1679499	+	193	152995526	-	Mmwyl1_1498	-	hypothetical protein
1484	 45.68	0	1679496..1680629	+	377	152995527	-	Mmwyl1_1499	-	hypothetical protein
1485	 45.16	0	1680688..1681245	+	185	152995528	-	Mmwyl1_1500	-	hypothetical protein
1486	 45.55	0	1681245..1682030	+	261	152995529	-	Mmwyl1_1501	-	hypothetical protein
1487	 44.59	0	1682050..1682493	+	147	152995530	-	Mmwyl1_1502	-	YHS domain-containing protein
1488	 44.37	0	1682518..1682970	+	150	152995531	-	Mmwyl1_1503	-	hypothetical protein
1489	 44.04	0	1682973..1684766	+	597	152995532	-	Mmwyl1_1504	-	phospholipid/glycerol acyltransferase
1490	 42.60	0	1685421..1686995	+	524	152995533	-	Mmwyl1_1505	-	cytochrome bd ubiquinol oxidase subunit I
1491	 43.54	0	1686997..1688133	+	378	152995534	-	Mmwyl1_1506	-	cytochrome d ubiquinol oxidase, subunit II
1492	 40.54	0	1688198..1688308	+	36	152995535	-	Mmwyl1_1507	-	cyd operon protein YbgT
1493	 45.83	0	1688314..1690089	+	591	152995536	-	Mmwyl1_1508	-	ABC transporter CydDC cysteine exporter (CydDC-E) family permease/ATP-binding protein CydD
1494	 47.87	+1	1690169..1691716	+	515	152995537	-	Mmwyl1_1509	-	ABC transporter related
1495	 36.81	-1	1692332..1693279	+	315	152995538	-	Mmwyl1_1510	-	alpha/beta fold family hydrolase
1496	 45.69	0	1695255..1696241	+	328	152995539	-	Mmwyl1_1511	-	ATP-binding region, ATPase-like protein
1497	 39.01	-1	1696321..1696602	+	93	152995540	-	Mmwyl1_1512	-	hypothetical protein
1498	 42.47	0	1696717..1696935	+	72	152995541	-	Mmwyl1_1513	-	hypothetical protein
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.