IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1323	 44.91	0	1496721..1498742	+	673	152995366	-	Mmwyl1_1337	-	NADH:flavin oxidoreductase/NADH oxidase
1324	 46.61	+1	1498816..1499169	-	117	152995367	-	Mmwyl1_1338	-	hypothetical protein
1325	 38.72	-1	1499307..1500809	+	500	152995368	-	Mmwyl1_1339	-	phospholipase D/transphosphatidylase
1326	 38.74	-1	1500851..1501627	+	258	152995369	-	Mmwyl1_1340	-	hypothetical protein
1327	 40.16	0	1501657..1503003	-	448	152995370	-	Mmwyl1_1341	-	hypothetical protein
1328	 39.88	0	1503040..1503558	-	172	152995371	-	Mmwyl1_1342	-	hypothetical protein
1329	 42.94	0	1503831..1504319	+	162	152995372	-	Mmwyl1_1343	-	BadM/Rrf2 family transcriptional regulator
1330	 42.45	0	1504394..1505830	+	478	152995373	-	Mmwyl1_1344	-	cysteine desulfurase activator complex subunit SufB
1331	 44.40	0	1505844..1506629	+	261	152995374	-	Mmwyl1_1345	-	FeS assembly ATPase SufC
1332	 43.97	0	1506633..1507892	+	419	152995375	-	Mmwyl1_1346	-	FeS assembly protein SufD
1333	 46.22	0	1507904..1509121	+	405	152995376	-	Mmwyl1_1347	-	SufS subfamily cysteine desulfurase
1334	 43.30	0	1509131..1509481	+	116	152995377	-	Mmwyl1_1348	-	iron-sulfur cluster assembly accessory protein
1335	 45.39	0	1509486..1510016	+	176	152995378	-	Mmwyl1_1349	-	hypothetical protein
1336	 46.24	0	1510135..1510560	+	141	152995379	-	Mmwyl1_1350	-	Fe-S metabolism associated SufE
1337	 46.49	+1	1510613..1511767	+	384	152995380	-	Mmwyl1_1351	-	aminotransferase class V
1338	 44.12	0	1511924..1512331	+	135	152995381	-	Mmwyl1_1352	-	nucleoside-diphosphate kinase
1339	 42.20	0	1512476..1513591	+	371	152995382	-	Mmwyl1_1353	-	radical SAM protein
1340	 40.63	0	1513634..1514359	+	241	152995383	-	Mmwyl1_1354	-	hypothetical protein
1341	 40.35	0	1514343..1515368	+	341	152995384	-	Mmwyl1_1355	-	hypothetical protein
1342	 41.69	0	1515377..1516489	+	370	152995385	-	Mmwyl1_1356	-	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
1343	 42.35	0	1516499..1517773	+	424	152995386	-	Mmwyl1_1357	-	histidyl-tRNA synthetase
1344	 40.03	0	1517835..1518476	+	213	152995387	-	Mmwyl1_1358	-	hypothetical protein
1345	 42.95	0	1518479..1519612	+	377	152995388	-	Mmwyl1_1359	-	Pyrrolo-quinoline quinone
1346	 42.15	0	1519705..1521042	+	445	152995389	-	Mmwyl1_1360	-	small GTP-binding protein
1347	 43.05	0	1521253..1522158	+	301	152995390	-	Mmwyl1_1361	-	alpha-L-glutamate ligase
1348	 43.43	0	1522158..1523207	+	349	152995391	-	Mmwyl1_1362	-	succinylglutamate desuccinylase/aspartoacylase
1349	 38.67	-1	1523348..1523965	+	205	152995392	-	Mmwyl1_1363	-	hypothetical protein
1350	 44.53	0	1524059..1526326	-	755	152995393	-	Mmwyl1_1364	-	radical SAM domain-containing protein
1351	 42.75	0	1526466..1527113	-	215	152995394	-	Mmwyl1_1365	-	thiopurine S-methyltransferase
1352	 38.73	-1	1527286..1527489	+	67	152995395	-	Mmwyl1_1366	-	hypothetical protein
1353	 43.61	0	1527589..1527948	+	119	152995396	-	Mmwyl1_1367	-	hypothetical protein
1354	 38.58	-1	1527973..1528506	+	177	152995397	-	Mmwyl1_1368	-	DinB family protein
1355	 41.38	0	1528550..1529791	+	413	152995398	-	Mmwyl1_1369	-	protein kinase
1356	 41.91	0	1529857..1530264	+	135	152995399	-	Mmwyl1_1370	-	transposase
1357	 38.87	-1	1530369..1531091	+	240	152995400	-	Mmwyl1_1371	-	integrase catalytic region
1358	 40.45	0	1531202..1531693	-	163	152995401	-	Mmwyl1_1372	-	67-dimethyl-8-ribityllumazine synthase
1359	 38.52	-1	1532245..1532610	+	121	152995402	-	Mmwyl1_1373	-	hypothetical protein
1360	 46.98	+1	1532723..1533499	+	258	152995403	-	Mmwyl1_1374	-	precorrin-3B C17-methyltransferase
1361	 45.74	0	1533547..1534320	+	257	152995404	-	Mmwyl1_1375	-	precorrin-4 C11-methyltransferase
1362	 44.69	0	1534360..1535442	+	360	152995405	-	Mmwyl1_1376	-	cobalamin biosynthesis protein CobW
1363	 48.33	+1	1535614..1539495	+	1293	152995406	-	Mmwyl1_1377	-	cobaltochelatase, CobN subunit
1364	 45.66	0	1539579..1540835	+	418	152995407	-	Mmwyl1_1378	-	cobalamin (vitamin B12) biosynthesis CbiX protein
1365	 37.85	-1	1540903..1542207	-	434	152995408	-	Mmwyl1_1379	-	hypothetical protein
1366	 45.60	0	1542410..1543648	-	412	152995409	-	Mmwyl1_1380	-	saccharopine dehydrogenase
1367	 41.53	0	1543685..1544782	-	365	152995410	-	Mmwyl1_1381	-	carboxynorspermidine decarboxylase
1368	 43.81	0	1545182..1545763	+	193	152995411	-	Mmwyl1_1382	-	NnrU family protein
1369	 41.39	0	1545844..1547754	-	636	152995412	-	Mmwyl1_1383	-	methyl-accepting chemotaxis sensory transducer
1370	 43.22	0	1547949..1549313	+	454	152995413	-	Mmwyl1_1384	-	putative chaperone
1371	 40.74	0	1549415..1551466	-	683	152995414	-	Mmwyl1_1385	-	methyl-accepting chemotaxis sensory transducer
1372	 44.60	0	1551684..1553396	-	570	152995415	-	Mmwyl1_1386	-	major facilitator transporter
1373	 40.97	0	1553680..1554753	+	357	152995416	-	Mmwyl1_1387	-	hypothetical protein
1374	 44.35	0	1555225..1555896	+	223	152995417	-	Mmwyl1_1388	-	hypothetical protein
1375	 41.55	0	1555962..1556849	-	295	152995418	-	Mmwyl1_1389	-	LysR family transcriptional regulator
1376	 43.47	0	1556965..1558167	+	400	152995419	-	Mmwyl1_1390	-	major facilitator transporter
1377	 41.99	0	1558312..1558773	+	153	152995420	-	Mmwyl1_1391	-	hypothetical protein
1378	 44.08	0	1558859..1560934	+	691	152995421	-	Mmwyl1_1392	-	TonB-dependent copper receptor
1379	 39.00	-1	1561623..1563281	+	552	152995422	-	Mmwyl1_1393	-	2-alkenal reductase
1380	 40.08	0	1563342..1565489	+	715	152995423	-	Mmwyl1_1394	-	heat shock protein DnaJ domain-containing protein
1381	 40.47	0	1565482..1566210	+	242	152995424	-	Mmwyl1_1395	-	hypothetical protein
1382	 39.76	0	1566288..1566707	+	139	152995425	-	Mmwyl1_1396	-	hypothetical protein
1383	 46.43	+1	1566736..1567323	+	195	152995426	-	Mmwyl1_1397	-	3'-5' exonuclease
1384	 41.89	0	1567814..1568035	+	73	152995427	-	Mmwyl1_1398	-	hypothetical protein
1385	 35.40	-2	1568028..1568318	+	96	152995428	-	Mmwyl1_1399	-	addiction module antitoxin
1386	 46.01	0	1568515..1568790	-	91	152995429	-	Mmwyl1_1400	-	prevent-host-death family protein
1387	 39.39	-1	1568916..1569179	-	87	152995430	-	Mmwyl1_1401	-	addiction module antitoxin
1388	 43.92	0	1569172..1569426	-	84	152995431	-	Mmwyl1_1402	-	prevent-host-death family protein
1389	 40.13	0	1569765..1571102	-	445	152995432	-	Mmwyl1_1403	-	deoxyguanosinetriphosphate triphosphohydrolase-like protein
1390	 37.75	-1	1571358..1572014	-	218	152995433	-	Mmwyl1_1404	-	hypothetical protein
1391	 48.60	+1	1574030..1576426	-	798	152995434	-	Mmwyl1_1405	-	phosphoenolpyruvate synthase
1392	 44.40	0	1576667..1577470	+	267	152995435	-	Mmwyl1_1406	-	hypothetical protein
1393	 44.49	0	1577825..1580467	+	880	152995436	-	Mmwyl1_1407	-	ribonuclease R
1394	 46.88	+1	1580556..1581323	+	255	152995437	-	Mmwyl1_1408	-	RNA methyltransferase
1395	 45.57	0	1581337..1582398	+	353	152995438	-	Mmwyl1_1409	-	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
1396	 41.22	0	1582442..1583227	+	261	152995439	-	Mmwyl1_1410	-	cobalamin-5-phosphate synthase CobS
1397	 43.94	0	1583224..1583817	+	197	152995440	-	Mmwyl1_1411	-	phosphoglycerate mutase
1398	 40.16	0	1583887..1584501	+	204	152995441	-	Mmwyl1_1412	-	hypothetical protein
1399	 46.05	0	1584520..1585164	+	214	152995442	-	Mmwyl1_1413	-	cob(I)alamin adenosyltransferase
1400	 41.67	0	1585379..1585822	+	147	152995443	-	Mmwyl1_1414	-	hypothetical protein
1401	 39.92	0	1586064..1586579	+	171	152995444	-	Mmwyl1_1415	-	superoxide dismutase Ni-type
1402	 41.58	0	1586602..1586904	+	100	152995445	-	Mmwyl1_1416	-	putative phage repressor
1403	 38.65	-1	1587043..1587663	+	206	152995446	-	Mmwyl1_1417	-	hypothetical protein
1404	 42.61	0	1587828..1588883	-	351	152995447	-	Mmwyl1_1418	-	iron-containing alcohol dehydrogenase
1405	 42.76	0	1589141..1590445	-	434	152995448	-	Mmwyl1_1419	-	short chain fatty acid transporter
1406	 42.94	0	1590883..1591413	+	176	152995449	-	Mmwyl1_1420	-	GCN5-related N-acetyltransferase
1407	 42.46	0	1591444..1592133	+	229	152995450	-	Mmwyl1_1421	-	pseudouridine synthase
1408	 45.16	0	1592146..1592517	+	123	152995451	-	Mmwyl1_1422	-	hypothetical protein
1409	 42.86	0	1592712..1593341	+	209	152995452	-	Mmwyl1_1423	-	TetR family transcriptional regulator
1410	 43.16	0	1593348..1596806	-	1152	152995453	-	Mmwyl1_1424	-	multi-sensor hybrid histidine kinase
1411	 44.90	0	1597031..1597393	+	120	152995454	-	Mmwyl1_1425	-	DOPA 45-dioxygenase
1412	 43.97	0	1597435..1597857	+	140	152995455	-	Mmwyl1_1426	-	GCN5-related N-acetyltransferase
1413	 46.17	0	1598159..1598641	+	160	152995456	-	Mmwyl1_1427	-	peptidylprolyl isomerase FKBP-type
1414	 38.66	-1	1598855..1599643	+	262	152995457	-	Mmwyl1_1428	-	hypothetical protein
1415	 44.98	0	1599704..1600330	+	208	152995458	-	Mmwyl1_1429	-	uracil-DNA glycosylase superfamily protein
1416	 40.81	0	1600299..1600766	-	155	152995459	-	Mmwyl1_1430	-	GCN5-related N-acetyltransferase
1417	 39.90	0	1600926..1601732	+	268	152995460	-	Mmwyl1_1431	-	PhzF family phenazine biosynthesis protein
1418	 37.85	-1	1601801..1601977	+	58	152995461	-	Mmwyl1_1432	-	hypothetical protein
1419	 38.92	-1	1602075..1602593	+	172	152995462	-	Mmwyl1_1433	-	hypothetical protein
1420	 37.45	-1	1602780..1603022	-	80	152995463	-	Mmwyl1_1434	-	hypothetical protein
1421	 41.35	0	1603177..1603650	-	157	152995464	-	Mmwyl1_1435	-	AsnC family transcriptional regulator
1422	 45.06	0	1603803..1605038	+	411	152995465	-	Mmwyl1_1436	-	aminotransferase class V
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.