IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1254	 44.61	0	1418274..1419311	-	345	152995297	-	Mmwyl1_1268	-	tetrahydrodipicolinate succinylase, putative
1255	 44.78	0	1419357..1420544	-	395	152995298	-	Mmwyl1_1269	-	aminotransferase class I and II
1256	 44.14	0	1420551..1423244	-	897	152995299	-	Mmwyl1_1270	-	metal dependent phosphohydrolase
1257	 46.85	+1	1423332..1424189	-	285	152995300	-	Mmwyl1_1271	-	methionine aminopeptidase, type I
1258	 41.90	0	1424522..1425256	+	244	152995301	-	Mmwyl1_1272	-	ribosomal protein S2
1259	 44.37	0	1425342..1426202	+	286	152995302	-	Mmwyl1_1273	-	translation elongation factor Ts
1260	 43.57	0	1426333..1427055	+	240	152995303	-	Mmwyl1_1274	-	uridylate kinase
1261	 39.43	-1	1427063..1427620	+	185	152995304	-	Mmwyl1_1275	-	ribosome recycling factor
1262	 44.13	0	1427670..1428401	+	243	152995305	-	Mmwyl1_1276	-	undecaprenyl diphosphate synthase
1263	 41.17	0	1428404..1429207	+	267	152995306	-	Mmwyl1_1277	-	phosphatidate cytidylyltransferase
1264	 42.78	0	1429198..1430382	+	394	152995307	-	Mmwyl1_1278	-	1-deoxy-D-xylulose 5-phosphate reductoisomerase
1265	 40.91	0	1430379..1431725	+	448	152995308	-	Mmwyl1_1279	-	putative membrane-associated zinc metalloprotease
1266	 38.24	-1	1431706..1434051	+	781	152995309	-	Mmwyl1_1280	-	surface antigen (D15)
1267	 39.80	0	1434083..1434577	+	164	152995310	-	Mmwyl1_1281	-	outer membrane chaperone Skp (OmpH)
1268	 41.28	0	1434581..1435612	+	343	152995311	-	Mmwyl1_1282	-	UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
1269	 39.73	0	1435619..1436056	+	145	152995312	-	Mmwyl1_1283	-	(3R)-hydroxymyristoyl-ACP dehydratase
1270	 40.80	0	1436056..1436832	+	258	152995313	-	Mmwyl1_1284	-	acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase
1271	 41.88	0	1436897..1438054	+	385	152995314	-	Mmwyl1_1285	-	lipid-A-disaccharide synthase
1272	 41.67	0	1438054..1438653	+	199	152995315	-	Mmwyl1_1286	-	ribonuclease H
1273	 43.28	0	1438658..1442134	+	1158	152995316	-	Mmwyl1_1287	-	DNA polymerase III, alpha subunit
1274	 43.46	0	1442261..1443208	+	315	152995317	-	Mmwyl1_1288	-	acetyl-CoA carboxylase, carboxyl transferase, alpha subunit
1275	 42.41	0	1443290..1444600	+	436	152995318	-	Mmwyl1_1289	-	tRNA(Ile)-lysidine synthetase
1276	 38.24	-1	1444756..1444959	+	67	152995319	-	Mmwyl1_1290	-	hypothetical protein
1277	 42.31	0	1444964..1445821	+	285	152995320	-	Mmwyl1_1291	-	secretion protein HlyD family protein
1278	 44.13	0	1445836..1447881	+	681	152995321	-	Mmwyl1_1292	-	fusaric acid resistance protein region
1279	 39.94	0	1447914..1448594	-	226	152995322	-	Mmwyl1_1293	-	hypothetical protein
1280	 38.05	-1	1448723..1449019	+	98	152995323	-	Mmwyl1_1294	-	hypothetical protein
1281	 44.31	0	1449035..1449754	-	239	152995324	-	Mmwyl1_1295	-	GntR family transcriptional regulator
1282	 45.11	0	1449978..1451081	+	367	152995325	-	Mmwyl1_1296	-	Rieske (2Fe-2S) domain-containing protein
1283	 41.90	0	1451144..1452100	+	318	152995326	-	Mmwyl1_1297	-	ferredoxin
1284	 42.81	0	1452277..1453911	+	544	152995327	-	Mmwyl1_1298	-	CTP synthetase
1285	 42.40	0	1454099..1455400	+	433	152995328	-	Mmwyl1_1299	-	phosphopyruvate hydratase
1286	 42.29	0	1455511..1455789	+	92	152995329	-	Mmwyl1_1300	-	septum formation initiator
1287	 43.56	0	1455786..1456499	+	237	152995330	-	Mmwyl1_1301	-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
1288	 42.15	0	1456552..1457073	+	173	152995331	-	Mmwyl1_1302	-	2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
1289	 43.86	0	1457070..1458161	+	363	152995332	-	Mmwyl1_1303	-	tRNA pseudouridine synthase D TruD
1290	 44.98	0	1458142..1458888	+	248	152995333	-	Mmwyl1_1304	-	stationary-phase survival protein SurE
1291	 43.96	0	1458864..1459550	+	228	152995334	-	Mmwyl1_1305	-	protein-L-isoaspartate O-methyltransferase
1292	 38.60	-1	1459543..1460472	+	309	152995335	-	Mmwyl1_1306	-	hypothetical protein
1293	 39.85	0	1460552..1461349	+	265	152995336	-	Mmwyl1_1307	-	peptidase M23B
1294	 42.18	0	1461377..1462393	+	338	152995337	-	Mmwyl1_1308	-	RpoD family RNA polymerase sigma factor
1295	 37.49	-1	1462458..1463900	-	480	152995338	-	Mmwyl1_1309	-	hypothetical protein
1296	 41.67	0	1464047..1464958	+	303	152995339	-	Mmwyl1_1310	-	phosphoserine phosphatase SerB
1297	 42.13	0	1465059..1466024	+	321	152995340	-	Mmwyl1_1311	-	LysR family transcriptional regulator
1298	 36.62	-1	1466043..1466468	-	141	152995341	-	Mmwyl1_1312	-	hypothetical protein
1299	 45.56	0	1466584..1467777	-	397	152995342	-	Mmwyl1_1313	-	molybdenum cofactor synthesis domain-containing protein
1300	 41.25	0	1467783..1468325	-	180	152995343	-	Mmwyl1_1314	-	molybdenum cofactor biosynthesis protein B
1301	 42.59	0	1468338..1469363	-	341	152995344	-	Mmwyl1_1315	-	molybdenum cofactor biosynthesis protein A
1302	 43.12	0	1469541..1470398	+	285	152995345	-	Mmwyl1_1316	-	palmitoyl-CoA hydrolase
1303	 44.32	0	1470402..1471475	-	357	152995346	-	Mmwyl1_1317	-	putative iron-sulfur cluster binding protein
1304	 37.93	-1	1471534..1471794	-	86	152995347	-	Mmwyl1_1318	-	hypothetical protein
1305	 44.95	0	1472233..1473945	+	570	152995348	-	Mmwyl1_1319	-	acetolactate synthase, large subunit, biosynthetic type
1306	 44.11	0	1473947..1474438	+	163	152995349	-	Mmwyl1_1320	-	acetolactate synthase, small subunit
1307	 41.34	0	1474530..1474991	+	153	152995350	-	Mmwyl1_1321	-	AsnC family transcriptional regulator
1308	 43.20	0	1474988..1475869	-	293	152995351	-	Mmwyl1_1322	-	hypothetical protein
1309	 43.24	0	1476182..1476817	+	211	152995352	-	Mmwyl1_1323	-	lysine exporter protein LysE/YggA
1310	 42.11	0	1476908..1477420	-	170	152995353	-	Mmwyl1_1324	-	S-ribosylhomocysteinase
1311	 42.10	0	1477485..1478762	-	425	152995354	-	Mmwyl1_1325	-	amino acid permease-associated region
1312	 42.19	0	1478920..1479348	+	142	152995355	-	Mmwyl1_1326	-	AsnC family transcriptional regulator
1313	 41.84	0	1479398..1481137	+	579	152995356	-	Mmwyl1_1327	-	chloride channel core
1314	 43.77	0	1481259..1482542	+	427	152995357	-	Mmwyl1_1328	-	glutamate-1-semialdehyde-2,1-aminomutase
1315	 43.45	0	1482572..1483342	+	256	152995358	-	Mmwyl1_1329	-	CDP-diacylglycerol--serine O-phosphatidyltransferase
1316	 40.38	0	1483469..1484461	+	330	152995359	-	Mmwyl1_1330	-	putative sulfite oxidase subunit YedY
1317	 36.42	-1	1484550..1485068	+	172	152995360	-	Mmwyl1_1331	-	ferric reductase domain-containing protein
1318	 40.95	0	1491539..1492024	+	161	152995361	-	Mmwyl1_1332	-	hypothetical protein
1319	 38.71	-1	1492142..1494019	+	625	152995362	-	Mmwyl1_1333	-	hypothetical protein
1320	 38.46	-1	1494063..1494998	-	311	152995363	-	Mmwyl1_1334	-	LysR family transcriptional regulator
1321	 39.82	0	1495106..1496014	+	302	152995364	-	Mmwyl1_1335	-	hypothetical protein
1322	 40.63	0	1496000..1496602	-	200	152995365	-	Mmwyl1_1336	-	TetR family transcriptional regulator
1323	 44.91	0	1496721..1498742	+	673	152995366	-	Mmwyl1_1337	-	NADH:flavin oxidoreductase/NADH oxidase
1324	 46.61	+1	1498816..1499169	-	117	152995367	-	Mmwyl1_1338	-	hypothetical protein
1325	 38.72	-1	1499307..1500809	+	500	152995368	-	Mmwyl1_1339	-	phospholipase D/transphosphatidylase
1326	 38.74	-1	1500851..1501627	+	258	152995369	-	Mmwyl1_1340	-	hypothetical protein
1327	 40.16	0	1501657..1503003	-	448	152995370	-	Mmwyl1_1341	-	hypothetical protein
1328	 39.88	0	1503040..1503558	-	172	152995371	-	Mmwyl1_1342	-	hypothetical protein
1329	 42.94	0	1503831..1504319	+	162	152995372	-	Mmwyl1_1343	-	BadM/Rrf2 family transcriptional regulator
1330	 42.45	0	1504394..1505830	+	478	152995373	-	Mmwyl1_1344	-	cysteine desulfurase activator complex subunit SufB
1331	 44.40	0	1505844..1506629	+	261	152995374	-	Mmwyl1_1345	-	FeS assembly ATPase SufC
1332	 43.97	0	1506633..1507892	+	419	152995375	-	Mmwyl1_1346	-	FeS assembly protein SufD
1333	 46.22	0	1507904..1509121	+	405	152995376	-	Mmwyl1_1347	-	SufS subfamily cysteine desulfurase
1334	 43.30	0	1509131..1509481	+	116	152995377	-	Mmwyl1_1348	-	iron-sulfur cluster assembly accessory protein
1335	 45.39	0	1509486..1510016	+	176	152995378	-	Mmwyl1_1349	-	hypothetical protein
1336	 46.24	0	1510135..1510560	+	141	152995379	-	Mmwyl1_1350	-	Fe-S metabolism associated SufE
1337	 46.49	+1	1510613..1511767	+	384	152995380	-	Mmwyl1_1351	-	aminotransferase class V
1338	 44.12	0	1511924..1512331	+	135	152995381	-	Mmwyl1_1352	-	nucleoside-diphosphate kinase
1339	 42.20	0	1512476..1513591	+	371	152995382	-	Mmwyl1_1353	-	radical SAM protein
1340	 40.63	0	1513634..1514359	+	241	152995383	-	Mmwyl1_1354	-	hypothetical protein
1341	 40.35	0	1514343..1515368	+	341	152995384	-	Mmwyl1_1355	-	hypothetical protein
1342	 41.69	0	1515377..1516489	+	370	152995385	-	Mmwyl1_1356	-	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
1343	 42.35	0	1516499..1517773	+	424	152995386	-	Mmwyl1_1357	-	histidyl-tRNA synthetase
1344	 40.03	0	1517835..1518476	+	213	152995387	-	Mmwyl1_1358	-	hypothetical protein
1345	 42.95	0	1518479..1519612	+	377	152995388	-	Mmwyl1_1359	-	Pyrrolo-quinoline quinone
1346	 42.15	0	1519705..1521042	+	445	152995389	-	Mmwyl1_1360	-	small GTP-binding protein
1347	 43.05	0	1521253..1522158	+	301	152995390	-	Mmwyl1_1361	-	alpha-L-glutamate ligase
1348	 43.43	0	1522158..1523207	+	349	152995391	-	Mmwyl1_1362	-	succinylglutamate desuccinylase/aspartoacylase
1349	 38.67	-1	1523348..1523965	+	205	152995392	-	Mmwyl1_1363	-	hypothetical protein
1350	 44.53	0	1524059..1526326	-	755	152995393	-	Mmwyl1_1364	-	radical SAM domain-containing protein
1351	 42.75	0	1526466..1527113	-	215	152995394	-	Mmwyl1_1365	-	thiopurine S-methyltransferase
1352	 38.73	-1	1527286..1527489	+	67	152995395	-	Mmwyl1_1366	-	hypothetical protein
1353	 43.61	0	1527589..1527948	+	119	152995396	-	Mmwyl1_1367	-	hypothetical protein
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.