IslandPathversion 1.0

IslandPath Analysis: Marinomonas sp. MWYL1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.05 STD DEV: 3.35
Marinomonas sp. MWYL1, complete genome - 1..5100344
4439 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1168	 49.52	+1	1318734..1319252	+	172	152995211	-	Mmwyl1_1182	-	hypothetical protein
1169	 51.94	+2	1319447..1321531	+	694	152995212	-	Mmwyl1_1183	-	Rhs element Vgr protein
1170	 38.49	-1	1321571..1322869	+	432	152995213	-	Mmwyl1_1184	-	hypothetical protein
1171	 39.78	0	1322899..1324185	+	428	152995214	-	Mmwyl1_1185	-	hypothetical protein
1172	 29.41	-2	1324179..1324892	+	237	152995215	-	Mmwyl1_1186	-	hypothetical protein
1173	 43.86	0	1325046..1325558	+	170	152995216	-	Mmwyl1_1187	-	hypothetical protein
1174	 36.75	-1	1325563..1326324	+	253	152995217	-	Mmwyl1_1188	-	hypothetical protein
1175	 51.01	+2	1326658..1327251	+	197	152995218	-	Mmwyl1_1189	-	VgrG protein
1176	 40.76	0	1327253..1327777	+	174	152995219	-	Mmwyl1_1190	-	hypothetical protein
1177	 40.47	0	1327789..1328811	+	340	152995220	-	Mmwyl1_1191	-	peptidoglycan-binding LysM
1178	 42.27	0	1328787..1331450	+	887	152995221	-	Mmwyl1_1192	-	hypothetical protein
1179	 38.74	-1	1331432..1332448	+	338	152995222	-	Mmwyl1_1193	-	hypothetical protein
1180	 52.03	+2	1333278..1335245	-	655	152995223	-	Mmwyl1_1194	-	Rhs element Vgr protein
1181	 48.94	+1	1335440..1335958	-	172	152995224	-	Mmwyl1_1195	-	hypothetical protein
1182	 37.13	-1	1336721..1337221	+	166	152995225	-	Mmwyl1_1196	-	hypothetical protein
1183	 40.89	0	1337275..1338756	+	493	152995226	-	Mmwyl1_1197	-	hypothetical protein
1184	 38.13	-1	1338761..1339198	+	145	152995227	-	Mmwyl1_1198	-	GPW/gp25 family protein
1185	 40.12	0	1339201..1340967	+	588	152995228	-	Mmwyl1_1199	-	hypothetical protein
1186	 42.41	0	1340931..1341944	+	337	152995229	-	Mmwyl1_1200	-	hypothetical protein
1187	 37.24	-1	1341947..1343458	+	503	152995230	-	Mmwyl1_1201	-	FHA domain-containing protein
1188	 35.77	-2	1343448..1343939	+	163	152995231	-	Mmwyl1_1202	-	hypothetical protein
1189	 38.65	-1	1343942..1345276	+	444	152995232	-	Mmwyl1_1203	-	hypothetical protein
1190	 33.85	-2	1345279..1346055	+	258	152995233	-	Mmwyl1_1204	-	hypothetical protein
1191	 42.45	0	1346109..1348730	+	873	152995234	-	Mmwyl1_1205	-	ATPase
1192	 41.91	0	1348733..1350283	+	516	152995235	-	Mmwyl1_1206	-	sigma-54 dependent trancsriptional regulator
1193	 44.50	0	1350276..1350902	+	208	152995236	-	Mmwyl1_1207	-	hypothetical protein
1194	 41.56	0	1350913..1352322	+	469	152995237	-	Mmwyl1_1208	-	ImpA domain-containing protein
1195	 41.73	0	1352337..1355885	+	1182	152995238	-	Mmwyl1_1209	-	ImcF domain-containing protein
1196	 40.56	0	1355932..1356609	+	225	152995239	-	Mmwyl1_1210	-	hypothetical protein
1197	 49.13	+1	1356826..1357344	+	172	152995240	-	Mmwyl1_1211	-	hypothetical protein
1198	 53.00	+2	1357553..1359652	+	699	152995241	-	Mmwyl1_1212	-	Rhs element Vgr protein
1199	 43.15	0	1359649..1360575	+	308	152995242	-	Mmwyl1_1213	-	hypothetical protein
1200	 42.68	0	1360572..1363964	+	1130	152995243	-	Mmwyl1_1214	-	peptidoglycan-binding LysM
1201	 41.30	0	1363961..1364914	+	317	152995244	-	Mmwyl1_1215	-	hypothetical protein
1202	 44.12	0	1365005..1365421	+	138	152995245	-	Mmwyl1_1216	-	hypothetical protein
1203	 43.05	0	1365590..1366546	+	318	152995246	-	Mmwyl1_1217	-	hypothetical protein
1204	 42.05	0	1366704..1367759	+	351	152995247	-	Mmwyl1_1218	-	hypothetical protein
1205	 42.49	0	1367762..1368853	+	363	152995248	-	Mmwyl1_1219	-	hypothetical protein
1206	 41.21	0	1368856..1369947	+	363	152995249	-	Mmwyl1_1220	-	hypothetical protein
1207	 44.60	0	1370071..1370487	+	138	152995250	-	Mmwyl1_1221	-	hypothetical protein
1208	 41.03	0	1370668..1371615	+	315	152995251	-	Mmwyl1_1222	-	hypothetical protein
1209	 44.84	0	1371708..1372124	+	138	152995252	-	Mmwyl1_1223	-	hypothetical protein
1210	 40.45	0	1372504..1373922	+	472	152995253	-	Mmwyl1_1224	-	hypothetical protein
1211	 37.35	-1	1374000..1374920	-	306	152995254	-	Mmwyl1_1225	-	LysR family transcriptional regulator
1212	 42.64	0	1375240..1376550	+	436	152995255	-	Mmwyl1_1226	-	CitMHS family citrate/H+ symporter
1213	 44.69	0	1376648..1377994	+	448	152995256	-	Mmwyl1_1227	-	hypothetical protein
1214	 41.33	0	1377991..1378290	+	99	152995257	-	Mmwyl1_1228	-	hypothetical protein
1215	 45.62	0	1378489..1378968	+	159	152995258	-	Mmwyl1_1229	-	MgtC/SapB transporter
1216	 38.46	-1	1379000..1379428	+	142	152995259	-	Mmwyl1_1230	-	GCN5-related N-acetyltransferase
1217	 35.65	-2	1379430..1380467	-	345	152995260	-	Mmwyl1_1231	-	diguanylate cyclase
1218	 38.25	-1	1380732..1381463	+	243	152995261	-	Mmwyl1_1232	-	hypothetical protein
1219	 38.59	-1	1381514..1382236	-	240	152995262	-	Mmwyl1_1233	-	integrase catalytic region
1220	 41.91	0	1382341..1382748	-	135	152995263	-	Mmwyl1_1234	-	transposase
1221	 42.01	0	1382846..1383721	-	291	152995264	-	Mmwyl1_1235	-	carboxylate/amino acid/amine transporter
1222	 40.85	0	1384037..1384648	+	203	152995265	-	Mmwyl1_1236	-	OmpW family protein
1223	 42.10	0	1384778..1385416	+	212	152995266	-	Mmwyl1_1237	-	metal dependent phosphohydrolase
1224	 38.79	-1	1385442..1385771	-	109	152995267	-	Mmwyl1_1238	-	Rieske (2Fe-2S) domain-containing protein
1225	 43.55	0	1386058..1388358	+	766	152995268	-	Mmwyl1_1239	-	peptidoglycan glycosyltransferase
1226	 42.51	0	1388643..1389470	+	275	152995269	-	Mmwyl1_1240	-	extracellular solute-binding protein
1227	 43.19	0	1389531..1390961	-	476	152995270	-	Mmwyl1_1241	-	glycogen/starch synthase, ADP-glucose type
1228	 41.71	0	1391055..1392308	+	417	152995271	-	Mmwyl1_1242	-	glucose-1-phosphate adenylyltransferase
1229	 41.86	0	1392680..1393312	+	210	152995272	-	Mmwyl1_1243	-	riboflavin synthase, alpha subunit
1230	 42.58	0	1393560..1395365	+	601	152995273	-	Mmwyl1_1244	-	GTP-binding protein LepA
1231	 39.64	-1	1395416..1396240	+	274	152995274	-	Mmwyl1_1245	-	signal peptidase I
1232	 42.54	0	1396258..1396941	+	227	152995275	-	Mmwyl1_1246	-	ribonuclease III
1233	 41.31	0	1396934..1397836	+	300	152995276	-	Mmwyl1_1247	-	GTP-binding protein Era
1234	 42.28	0	1397842..1398579	+	245	152995277	-	Mmwyl1_1248	-	DNA repair protein RecO
1235	 41.67	0	1398607..1398990	+	127	152995278	-	Mmwyl1_1249	-	holo-acyl-carrier-protein synthase
1236	 38.95	-1	1398983..1401793	-	936	152995279	-	Mmwyl1_1250	-	multi-sensor hybrid histidine kinase
1237	 43.51	0	1402177..1403070	+	297	152995280	-	Mmwyl1_1251	-	cysteine synthase B
1238	 41.57	0	1403211..1404533	+	440	152995281	-	Mmwyl1_1252	-	RNA methyltransferase
1239	 43.24	0	1404550..1406799	+	749	152995282	-	Mmwyl1_1253	-	(p)ppGpp synthetase I, SpoT/RelA
1240	 43.06	0	1406829..1407599	+	256	152995283	-	Mmwyl1_1254	-	MazG family protein
1241	 45.04	0	1407667..1410297	+	876	152995284	-	Mmwyl1_1255	-	phosphoenolpyruvate carboxylase
1242	 42.62	0	1410524..1411180	+	218	152995285	-	Mmwyl1_1256	-	nucleoside-triphosphate--adenylate kinase
1243	 44.77	0	1411188..1411895	+	235	152995286	-	Mmwyl1_1257	-	peptidase M22 glycoprotease
1244	 40.32	0	1411900..1412700	+	266	152995287	-	Mmwyl1_1258	-	putative undecaprenol kinase
1245	 41.76	0	1412898..1413692	+	264	152995288	-	Mmwyl1_1259	-	hypothetical protein
1246	 37.09	-1	1413704..1413916	-	70	152995289	-	Mmwyl1_1260	-	SlyX family protein
1247	 41.19	0	1414206..1414676	+	156	152995290	-	Mmwyl1_1261	-	cold-shock DNA-binding domain-containing protein
1248	 43.78	0	1414699..1415196	+	165	152995291	-	Mmwyl1_1262	-	redoxin domain-containing protein
1249	 41.47	0	1415313..1415693	-	126	152995292	-	Mmwyl1_1263	-	aspartate 1-decarboxylase
1250	 40.74	0	1415761..1416138	-	125	152995293	-	Mmwyl1_1264	-	hypothetical protein
1251	 38.95	-1	1416143..1416409	-	88	152995294	-	Mmwyl1_1265	-	hypothetical protein
1252	 45.23	0	1416439..1417581	-	380	152995295	-	Mmwyl1_1266	-	succinyl-diaminopimelate desuccinylase
1253	 37.39	-1	1417861..1418205	-	114	152995296	-	Mmwyl1_1267	-	arsenate reductase and related
1254	 44.61	0	1418274..1419311	-	345	152995297	-	Mmwyl1_1268	-	tetrahydrodipicolinate succinylase, putative
1255	 44.78	0	1419357..1420544	-	395	152995298	-	Mmwyl1_1269	-	aminotransferase class I and II
1256	 44.14	0	1420551..1423244	-	897	152995299	-	Mmwyl1_1270	-	metal dependent phosphohydrolase
1257	 46.85	+1	1423332..1424189	-	285	152995300	-	Mmwyl1_1271	-	methionine aminopeptidase, type I
1258	 41.90	0	1424522..1425256	+	244	152995301	-	Mmwyl1_1272	-	ribosomal protein S2
1259	 44.37	0	1425342..1426202	+	286	152995302	-	Mmwyl1_1273	-	translation elongation factor Ts
1260	 43.57	0	1426333..1427055	+	240	152995303	-	Mmwyl1_1274	-	uridylate kinase
1261	 39.43	-1	1427063..1427620	+	185	152995304	-	Mmwyl1_1275	-	ribosome recycling factor
1262	 44.13	0	1427670..1428401	+	243	152995305	-	Mmwyl1_1276	-	undecaprenyl diphosphate synthase
1263	 41.17	0	1428404..1429207	+	267	152995306	-	Mmwyl1_1277	-	phosphatidate cytidylyltransferase
1264	 42.78	0	1429198..1430382	+	394	152995307	-	Mmwyl1_1278	-	1-deoxy-D-xylulose 5-phosphate reductoisomerase
1265	 40.91	0	1430379..1431725	+	448	152995308	-	Mmwyl1_1279	-	putative membrane-associated zinc metalloprotease
1266	 38.24	-1	1431706..1434051	+	781	152995309	-	Mmwyl1_1280	-	surface antigen (D15)
1267	 39.80	0	1434083..1434577	+	164	152995310	-	Mmwyl1_1281	-	outer membrane chaperone Skp (OmpH)
43.05	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.