version 1.0
Magnetococcus sp. MC-1, complete genome - 1..4719581 3716 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 793 57.67 0 1000576..1002564 + 662 117924111 - Mmc1_0802 - hypothetical protein 794 42.22 -2 1002615..1003706 + 363 117924112 - Mmc1_0803 - hypothetical protein 795 52.44 0 1004964..1007015 - 683 117924113 - Mmc1_0805 - RpoD family RNA polymerase sigma factor 796 54.37 0 1007055..1008974 - 639 117924114 - Mmc1_0806 - DNA primase 797 54.05 0 1008983..1009426 - 147 117924115 - Mmc1_0807 - GatB/Yqey domain-containing protein 798 53.46 0 1009966..1010601 + 211 117924116 - Mmc1_0808 - carboxymuconolactone decarboxylase 799 51.98 0 1010927..1012111 + 394 117924117 - Mmc1_0809 - hypothetical protein 800 52.79 0 1012272..1012826 + 184 117924118 - Mmc1_0810 - polysaccharide export protein 801 58.72 +1 1013096..1015498 + 800 117924119 - Mmc1_0811 - hypothetical protein 802 54.98 0 1015627..1016088 - 153 117924120 - Mmc1_0812 - hypothetical protein 803 55.79 0 1016463..1017446 + 327 117924121 - Mmc1_0813 - malate dehydrogenase 804 56.45 0 1017596..1018789 + 397 117924122 - Mmc1_0814 - phosphoglycerate mutase 805 58.33 0 1018912..1019199 - 95 117924123 - Mmc1_0815 - 50S ribosomal protein L28P 806 55.71 0 1019561..1019779 + 72 117924124 - Mmc1_0816 - hypothetical protein 807 55.13 0 1020003..1021787 + 594 117924125 - Mmc1_0817 - TPR repeat-containing protein 808 60.05 +1 1021823..1022638 + 271 117924126 - Mmc1_0818 - hypothetical protein 809 58.70 +1 1022635..1023525 + 296 117924127 - Mmc1_0819 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 810 55.17 0 1023816..1024763 + 315 117924128 - Mmc1_0820 - ribose-phosphate pyrophosphokinase 811 54.10 0 1024885..1025481 + 198 117924129 - Mmc1_0821 - 50S ribosomal protein L25P 812 56.11 0 1025564..1026283 + 239 117924130 - Mmc1_0822 - peptidyl-tRNA hydrolase 813 54.14 0 1026470..1027579 + 369 117924131 - Mmc1_0823 - GTP-binding protein YchF 814 55.49 0 1027793..1028758 - 321 117924132 - Mmc1_0824 - homoserine kinase 815 54.13 0 1029017..1029646 + 209 117924133 - Mmc1_0825 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 816 51.91 0 1029669..1030766 + 365 117924134 - Mmc1_0826 - peptidase U32 817 51.61 0 1030766..1031695 + 309 117924135 - Mmc1_0827 - peptidase U32 818 56.06 0 1031826..1032089 + 87 117924136 - Mmc1_0828 - hypothetical protein 819 55.91 0 1032268..1033689 + 473 117924137 - Mmc1_0829 - aldehyde dehydrogenase 820 58.93 +1 1034006..1035568 + 520 117924138 - Mmc1_0830 - Mg chelatase, subunit ChlI 821 54.71 0 1035678..1036229 + 183 117924139 - Mmc1_0831 - XRE family transcriptional regulator 822 54.66 0 1036850..1038040 + 396 117924140 - Mmc1_0832 - elongation factor Tu 823 50.00 -1 1038342..1038497 + 51 117924141 - Mmc1_0833 - 50S ribosomal protein L33P 824 51.04 0 1038679..1038870 + 63 117924142 - Mmc1_0834 - protein translocase subunit secE/sec61 gamma 825 47.65 -1 1038977..1039507 + 176 117924143 - Mmc1_0835 - transcription antitermination protein nusG 826 54.08 0 1039544..1039972 + 142 117924144 - Mmc1_0836 - 50S ribosomal protein L11P 827 51.88 0 1039983..1040672 + 229 117924145 - Mmc1_0837 - 50S ribosomal protein L1P 828 53.56 0 1040956..1041474 + 172 117924146 - Mmc1_0838 - 50S ribosomal protein L10P 829 49.73 -1 1041544..1041915 + 123 117924147 - Mmc1_0839 - 50S ribosomal protein L12P 830 51.97 0 1042271..1046353 + 1360 117924148 - Mmc1_0840 - DNA-directed RNA polymerase, beta subunit 831 53.39 0 1046510..1050748 + 1412 117924149 - Mmc1_0841 - DNA-directed RNA polymerase, beta' subunit 832 54.03 0 1051014..1051385 + 123 117924150 rpsL Mmc1_0842 - 30S ribosomal protein S12 833 53.72 0 1051449..1051919 + 156 117924151 - Mmc1_0843 - 30S ribosomal protein S7 834 50.75 0 1051998..1054076 + 692 117924152 - Mmc1_0844 - translation elongation factor 2 (EF-2/EF-G) 835 54.91 0 1054110..1055300 + 396 117924153 - Mmc1_0845 - elongation factor Tu 836 48.08 -1 1055334..1055645 + 103 117924154 - Mmc1_0846 - SSU ribosomal protein S10P 837 52.71 0 1055769..1056413 + 214 117924155 - Mmc1_0847 - 50S ribosomal protein L3P 838 51.92 0 1056437..1057060 + 207 117924156 - Mmc1_0848 - 50S ribosomal protein L4P 839 52.00 0 1057057..1057356 + 99 117924157 - Mmc1_0849 - 50S ribosomal protein L23P 840 52.16 0 1057380..1058213 + 277 117924158 rplB Mmc1_0850 - 50S ribosomal protein L2 841 48.39 -1 1058234..1058512 + 92 117924159 - Mmc1_0851 - SSU ribosomal protein S19P 842 53.22 0 1058531..1058872 + 113 117924160 - Mmc1_0852 - 50S ribosomal protein L22P 843 51.97 0 1058895..1059527 + 210 117924161 - Mmc1_0853 - SSU ribosomal protein S3P 844 55.56 0 1059546..1059959 + 137 117924162 rplP Mmc1_0854 - 50S ribosomal protein L16 845 52.94 0 1059962..1060165 + 67 117924163 - Mmc1_0855 - 50S ribosomal protein L29P 846 50.00 -1 1060165..1060416 + 83 117924164 - Mmc1_0856 - SSU ribosomal protein S17P 847 52.30 0 1060429..1060797 + 122 117924165 - Mmc1_0857 - 50S ribosomal protein L14P 848 50.15 -1 1060813..1061151 + 112 117924166 - Mmc1_0858 - 50S ribosomal protein L24P 849 50.90 0 1061171..1061728 + 185 117924167 rplE Mmc1_0859 - 50S ribosomal protein L5 850 53.23 0 1061721..1061906 + 61 117924168 - Mmc1_0860 - SSU ribosomal protein S14P 851 49.87 -1 1061934..1062332 + 132 117924169 - Mmc1_0861 - SSU ribosomal protein S8P 852 50.75 0 1062349..1062882 + 177 117924170 - Mmc1_0862 - 50S ribosomal protein L6P 853 52.73 0 1062898..1063263 + 121 117924171 - Mmc1_0863 - 50S ribosomal protein L18P 854 51.87 0 1063277..1063810 + 177 117924172 - Mmc1_0864 - SSU ribosomal protein S5P 855 48.89 -1 1063824..1064003 + 59 117924173 - Mmc1_0865 - 50S ribosomal protein L30P 856 53.80 0 1064023..1064496 + 157 117924174 - Mmc1_0866 - 50S ribosomal protein L15P 857 48.98 -1 1064530..1065858 + 442 117924175 - Mmc1_0867 - protein translocase subunit secY/sec61 alpha 858 45.61 -2 1065911..1066024 + 37 117924176 - Mmc1_0868 - 50S ribosomal protein L36P 859 55.28 0 1066186..1066554 + 122 117924177 rpsM Mmc1_0869 - 30S ribosomal protein S13 860 53.79 0 1066569..1066964 + 131 117924178 - Mmc1_0870 - 30S ribosomal protein S11 861 48.96 -1 1066997..1067623 + 208 117924179 - Mmc1_0871 - SSU ribosomal protein S4P 862 46.14 -1 1067659..1068681 + 340 117924180 - Mmc1_0872 - DNA-directed RNA polymerase, alpha subunit 863 51.97 0 1068693..1069073 + 126 117924181 - Mmc1_0873 - 50S ribosomal protein L17P 864 49.79 -1 1069783..1070025 + 80 117924182 - Mmc1_0874 - hypothetical protein 865 54.66 0 1070041..1071639 + 532 117924183 - Mmc1_0875 - transposase IS66 866 45.44 -2 1071772..1072572 + 266 117924184 - Mmc1_0876 - hypothetical protein 867 50.54 0 1073480..1075135 + 551 117924185 - Mmc1_0877 - cytochrome c family protein 868 49.66 -1 1075135..1075728 + 197 117924186 - Mmc1_0878 - cytochrome B561 869 53.12 0 1075785..1076633 - 282 117924187 - Mmc1_0879 - glutamine amidotransferase, class-II 870 55.31 0 1076962..1078062 + 366 117924188 - Mmc1_0880 - hydrogenase formation HypD protein 871 54.86 0 1078439..1079488 + 349 117924189 - Mmc1_0881 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 872 60.21 +1 1079485..1080336 + 283 117924190 - Mmc1_0882 - oxidoreductase FAD-binding subunit 873 57.36 0 1080338..1081186 + 282 117924191 - Mmc1_0883 - NADH ubiquinone oxidoreductase, 20 kDa subunit 874 58.12 0 1081189..1082487 + 432 117924192 - Mmc1_0884 - nickel-dependent hydrogenase, large subunit 875 64.29 +2 1082487..1082990 + 167 117924193 - Mmc1_0885 - hypothetical protein 876 53.28 0 1083369..1084601 + 410 117924194 - Mmc1_0886 - Ste24 endopeptidase 877 53.81 0 1084668..1086401 + 577 117924195 - Mmc1_0887 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 878 54.25 0 1086579..1087295 + 238 117924196 - Mmc1_0888 - 3'-5' exonuclease 879 58.41 0 1087330..1087656 - 108 117924197 - Mmc1_0889 - hypothetical protein 880 57.88 0 1087966..1089741 + 591 117924198 - Mmc1_0890 - WD-40 repeat-containing protein 881 60.06 +1 1089829..1091901 - 690 117924199 - Mmc1_0891 - AMP-dependent synthetase and ligase 882 57.93 0 1091957..1093330 - 457 117924200 - Mmc1_0892 - hypothetical protein 883 55.99 0 1093476..1094561 + 361 117924201 - Mmc1_0893 - radical SAM domain-containing protein 884 50.54 0 1094721..1095179 + 152 117924202 - Mmc1_0894 - ferric uptake regulator family protein 885 55.72 0 1095304..1097988 - 894 117924203 - Mmc1_0895 - PAS/PAC sensor hybrid histidine kinase 886 54.14 0 1098272..1099780 - 502 117924204 - Mmc1_0896 - hypothetical protein 887 52.15 0 1100089..1101390 + 433 117924205 - Mmc1_0897 - citrate synthase 888 55.52 0 1101642..1103336 + 564 117924206 - Mmc1_0898 - acetolactate synthase, large subunit 889 55.56 0 1103348..1103851 + 167 117924207 - Mmc1_0899 - acetolactate synthase, small subunit 890 55.36 0 1104032..1105048 + 338 117924208 - Mmc1_0900 - ketol-acid reductoisomerase 891 54.64 0 1105314..1105970 + 218 117924209 - Mmc1_0901 - phosphatidylserine decarboxylase related protein 892 54.60 0 1105975..1106778 + 267 117924210 - Mmc1_0902 - CDP-diacylglycerol--serine O-phosphatidyltransferase 54.32 MEAN 4.16 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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