version 1.0
Magnetococcus sp. MC-1, complete genome - 1..4719581 3716 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3454 52.69 0 4369409..4370095 + 228 117926772 - Mmc1_3498 - heme exporter protein CcmA 3455 56.16 0 4370089..4370754 + 221 117926773 - Mmc1_3499 - cytochrome c-type biogenesis protein CcmB 3456 58.41 0 4370754..4371443 + 229 117926774 - Mmc1_3500 - heme exporter protein CcmC 3457 50.96 0 4371576..4372046 + 156 117926775 - Mmc1_3501 - CcmE/CycJ protein 3458 54.45 0 4372083..4374047 + 654 117926776 - Mmc1_3502 - cytochrome c assembly protein 3459 53.12 0 4374049..4374609 + 186 117926777 - Mmc1_3503 - periplasmic protein thiol--disulphide oxidoreductase DsbE 3460 55.04 0 4374609..4375124 + 171 117926778 - Mmc1_3504 - cytochrome C biogenesis protein 3461 53.68 0 4375376..4376245 + 289 117926779 - Mmc1_3505 - HemK family modification methylase 3462 54.31 0 4376466..4378691 - 741 117926780 - Mmc1_3506 - peptidase M23B 3463 54.33 0 4379198..4380526 + 442 117926781 - Mmc1_3507 - diguanylate cyclase 3464 57.00 0 4380677..4382125 - 482 117926782 - Mmc1_3508 - protein of unknown function DUF610, YibQ 3465 52.38 0 4382250..4383635 - 461 117926783 - Mmc1_3509 - carboxyl-terminal protease 3466 58.04 0 4383891..4385084 - 397 117926784 - Mmc1_3510 - peptidase M23B 3467 57.55 0 4385077..4386633 - 518 117926785 - Mmc1_3511 - phosphoglyceromutase 3468 53.31 0 4387116..4388942 + 608 117926786 - Mmc1_3512 - TrkA domain-containing protein 3469 52.16 0 4389507..4390616 - 369 117926787 - Mmc1_3513 - filamentation induced by cAMP protein Fic 3470 48.72 -1 4391422..4393377 - 651 117926788 - Mmc1_3514 - alpha amylase, catalytic region 3471 56.35 0 4393507..4394340 - 277 117926789 - Mmc1_3515 - HAD family hydrolase 3472 54.07 0 4394337..4396487 - 716 117926790 - Mmc1_3516 - sucrose-phosphate synthase 3473 57.23 0 4396790..4397626 - 278 117926791 - Mmc1_3517 - methyltransferase type 11 3474 54.75 0 4397780..4398643 + 287 117926792 - Mmc1_3518 - hypothetical protein 3475 53.25 0 4399238..4401727 + 829 117926793 - Mmc1_3519 - metal dependent phosphohydrolase 3476 50.90 0 4401720..4402442 + 240 117926794 - Mmc1_3520 - CRISPR-associated Cas5 family protein 3477 53.60 0 4402439..4404382 + 647 117926795 - Mmc1_3521 - CRISPR-associated RAMP Csd1 family protein 3478 52.26 0 4404409..4405227 + 272 117926796 - Mmc1_3522 - CRISPR-associated Csd2 family protein 3479 56.01 0 4405236..4405892 + 218 117926797 - Mmc1_3523 - CRISPR-associated exonuclease Cas4 family protein 3480 54.39 0 4405889..4406914 + 341 117926798 - Mmc1_3524 - CRISPR-associated Cas1 family protein 3481 51.39 0 4406927..4407214 + 95 117926799 - Mmc1_3525 - CRISPR-associated Cas2 family protein 3482 51.39 0 4416909..4419671 - 920 117926800 - Mmc1_3526 - Hpt sensor hybrid histidine kinase 3483 46.15 -1 4419683..4420345 - 220 117926801 - Mmc1_3527 - CheC, inhibitor of MCP methylation 3484 51.34 0 4420815..4421747 - 310 117926802 - Mmc1_3528 - response regulator receiver modulated diguanylate cyclase 3485 54.07 0 4422345..4423463 + 372 117926803 - Mmc1_3529 - metal dependent phosphohydrolase 3486 49.36 -1 4423448..4425412 - 654 117926804 - Mmc1_3530 - diguanylate cyclase with PAS/PAC sensor 3487 50.82 0 4425582..4426010 - 142 117926805 - Mmc1_3531 - general secretion pathway protein G 3488 50.86 0 4427110..4430925 + 1271 117926806 - Mmc1_3532 - PAS/PAC sensor hybrid histidine kinase 3489 47.24 -1 4431400..4431780 + 126 117926807 - Mmc1_3533 - hypothetical protein 3490 48.05 -1 4432066..4433247 + 393 117926808 - Mmc1_3534 - response regulator receiver protein 3491 48.12 -1 4433727..4434578 + 283 117926809 - Mmc1_3535 - phosphonate ABC transporter, periplasmic phosphonate-binding protein 3492 50.63 0 4434581..4436488 + 635 117926810 - Mmc1_3536 - periplasmic sensor signal transduction histidine kinase 3493 52.51 0 4437544..4438617 + 357 117926811 - Mmc1_3537 - DNA-directed DNA polymerase 3494 53.95 0 4438628..4439626 + 332 117926812 - Mmc1_3538 - alcohol dehydrogenase 3495 54.40 0 4440902..4442116 + 404 117926813 - Mmc1_3539 - metallophosphoesterase 3496 56.07 0 4442113..4445574 + 1153 117926814 - Mmc1_3540 - hypothetical protein 3497 55.83 0 4445674..4446780 - 368 117926815 - Mmc1_3541 - hypothetical protein 3498 53.88 0 4447163..4447678 - 171 117926816 - Mmc1_3542 - hypothetical protein 3499 59.26 +1 4447675..4448133 - 152 117926817 - Mmc1_3543 - hypothetical protein 3500 57.48 0 4448143..4448730 - 195 117926818 - Mmc1_3544 - ECF subfamily RNA polymerase sigma-24 factor 3501 53.81 0 4448790..4449419 - 209 117926819 - Mmc1_3545 - signal transduction protein 3502 53.99 0 4449639..4450064 - 141 117926820 - Mmc1_3546 - BadM/Rrf2 family transcriptional regulator 3503 51.50 0 4450218..4452248 - 676 117926821 - Mmc1_3547 - methyl-accepting chemotaxis sensory transducer 3504 55.23 0 4452879..4454207 + 442 117926822 - Mmc1_3548 - putative deoxyguanosinetriphosphate triphosphohydrolase 3505 56.36 0 4454816..4456648 - 610 117926823 - Mmc1_3549 - hypothetical protein 3506 53.25 0 4456921..4457628 - 235 117926824 - Mmc1_3550 - phage lambda repressor protein. Serine peptidase. MEROPS family S24 3507 54.15 0 4458137..4459015 + 292 117926825 - Mmc1_3551 - 3-hydroxyisobutyrate dehydrogenase 3508 58.77 +1 4459043..4460575 + 510 117926826 - Mmc1_3552 - TPR repeat-containing protein 3509 52.45 0 4460661..4461068 - 135 117926827 - Mmc1_3553 - cytochrome c, class I 3510 55.27 0 4461434..4462144 - 236 117926828 - Mmc1_3554 - phosphate uptake regulator, PhoU 3511 57.19 0 4462595..4464124 - 509 117926829 - Mmc1_3555 - AMP-dependent synthetase and ligase 3512 59.70 +1 4464282..4466435 - 717 117926830 - Mmc1_3556 - short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase 3513 61.28 +1 4466432..4467748 - 438 117926831 - Mmc1_3557 - acetyl-CoA acetyltransferase 3514 58.79 +1 4467745..4470081 - 778 117926832 fadE Mmc1_3558 - acyl-CoA dehydrogenase 3515 54.05 0 4470209..4471270 - 353 117926833 - Mmc1_3559 - hypothetical protein 3516 55.41 0 4471636..4473723 + 695 117926834 - Mmc1_3560 - TonB-dependent copper receptor 3517 63.86 +2 4473802..4474728 + 308 117926835 - Mmc1_3561 - TonB family protein 3518 54.90 0 4474721..4475332 + 203 117926836 - Mmc1_3562 - MotA/TolQ/ExbB proton channel 3519 57.25 0 4475329..4475742 + 137 117926837 - Mmc1_3563 - biopolymer transport protein ExbD/TolR 3520 57.58 0 4475749..4476639 - 296 117926838 - Mmc1_3564 - putative agmatinase 3521 49.68 -1 4477501..4478283 - 260 117926839 fliP Mmc1_3565 - flagellar biosynthesis protein FliP 3522 52.56 0 4478283..4478672 - 129 117926840 - Mmc1_3566 - hypothetical protein 3523 48.07 -1 4478904..4479317 - 137 117926841 - Mmc1_3567 - flagellar motor switch protein FliN 3524 51.25 0 4479356..4480354 - 332 117926842 - Mmc1_3568 - flagellar motor switch protein FliM 3525 51.50 0 4480466..4480966 - 166 117926843 - Mmc1_3569 - flagellar basal body-associated protein FliL 3526 52.98 0 4481119..4482609 - 496 117926844 - Mmc1_3570 - hypothetical protein 3527 50.81 0 4482714..4483388 - 224 117926845 - Mmc1_3571 - flagellar hook capping protein 3528 53.44 0 4483802..4484905 - 367 117926846 - Mmc1_3572 - flagellar hook-length control protein 3529 51.62 0 4485525..4488308 - 927 117926847 - Mmc1_3573 - methyl-accepting chemotaxis sensory transducer 3530 53.11 0 4488639..4489634 - 331 117926848 - Mmc1_3574 - 2-nitropropane dioxygenase, NPD 3531 50.56 0 4489739..4490098 - 119 117926849 - Mmc1_3575 - hypothetical protein 3532 53.54 0 4491327..4494641 + 1104 117926850 - Mmc1_3576 - CheA signal transduction histidine kinases 3533 47.78 -1 4494730..4495248 + 172 117926851 - Mmc1_3577 - CheW protein 3534 46.79 -1 4495739..4496734 + 331 117926852 - Mmc1_3578 - methyl-accepting chemotaxis sensory transducer 3535 41.82 -2 4496819..4497136 + 105 117926853 - Mmc1_3579 - anti-sigma-factor antagonist 3536 49.20 -1 4497153..4498847 + 564 117926854 - Mmc1_3580 - response regulator receiver protein 3537 55.35 0 4498866..4500146 + 426 117926855 - Mmc1_3581 - response regulator receiver modulated CheB methylesterase 3538 49.72 -1 4500206..4501114 + 302 117926856 - Mmc1_3582 - MCP methyltransferase, CheR-type 3539 47.62 -1 4501124..4501501 + 125 117926857 - Mmc1_3583 - response regulator receiver protein 3540 48.15 -1 4501596..4502054 + 152 117926858 - Mmc1_3584 - hypothetical protein 3541 48.61 -1 4502172..4502531 + 119 117926859 - Mmc1_3585 - response regulator receiver protein 3542 52.79 0 4502655..4504139 + 494 117926860 - Mmc1_3586 - CBS domain-containing protein 3543 53.02 0 4504427..4505914 - 495 117926861 - Mmc1_3587 - small GTP-binding protein 3544 58.29 0 4506148..4507317 - 389 117926862 - Mmc1_3588 - Pyrrolo-quinoline quinone 3545 54.38 0 4507348..4508055 - 235 117926863 - Mmc1_3589 - TPR repeat-containing protein 3546 58.77 +1 4508174..4509376 - 400 117926864 - Mmc1_3590 - histidyl-tRNA synthetase 3547 56.45 0 4509416..4510531 - 371 117926865 - Mmc1_3591 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 3548 59.73 +1 4510553..4512253 - 566 117926866 - Mmc1_3592 - hypothetical protein 3549 56.34 0 4512379..4514112 - 577 117926867 - Mmc1_3593 - NAD+ synthetase 3550 56.92 0 4514296..4515393 + 365 117926868 - Mmc1_3594 - histidinol phosphate aminotransferase 3551 50.81 0 4515478..4516278 - 266 117926869 - Mmc1_3595 - hypothetical protein 3552 51.43 0 4516292..4517098 - 268 117926870 - Mmc1_3596 - hypothetical protein 3553 57.12 0 4517318..4517893 + 191 117926871 - Mmc1_3597 - hypothetical protein 54.32 MEAN 4.16 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.