version 1.0
Magnetococcus sp. MC-1, complete genome - 1..4719581 3716 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 272 46.71 -1 312216..312671 + 151 117923590 - Mmc1_0274 - hypothetical protein 273 56.56 0 312740..313471 - 243 117923591 - Mmc1_0275 - short-chain dehydrogenase/reductase SDR 274 56.35 0 313530..314450 + 306 117923592 - Mmc1_0276 - tRNA delta(2)-isopentenylpyrophosphate transferase 275 45.35 -2 314696..314953 + 85 117923593 - Mmc1_0277 - RNA-binding protein Hfq 276 54.20 0 315020..316318 + 432 117923594 - Mmc1_0278 - GTP-binding protein, HSR1-related 277 50.35 0 318313..319587 - 424 117923595 - Mmc1_0279 - metal dependent phosphohydrolase 278 53.33 0 320040..320384 + 114 117923596 - Mmc1_0280 - hypothetical protein 279 51.30 0 320472..321011 - 179 117923597 - Mmc1_0281 - hypothetical protein 280 49.10 -1 321021..321242 - 73 117923598 - Mmc1_0282 - rubredoxin-type Fe(Cys)4 protein 281 52.67 0 321914..322363 + 149 117923599 - Mmc1_0283 - hypothetical protein 282 58.09 0 322581..323186 + 201 117923600 - Mmc1_0284 - hypothetical protein 283 52.17 0 323330..323605 + 91 117923601 - Mmc1_0285 - hypothetical protein 284 52.71 0 323709..324059 - 116 117923602 - Mmc1_0286 - arsenate reductase 285 54.85 0 324075..324497 - 140 117923603 - Mmc1_0287 - hypothetical protein 286 58.32 0 324717..327485 + 922 117923604 - Mmc1_0288 - hypothetical protein 287 55.04 0 327824..329053 + 409 117923605 - Mmc1_0289 - hypothetical protein 288 54.19 0 329100..330926 + 608 117923606 - Mmc1_0290 - hypothetical protein 289 61.14 +1 330926..332011 + 361 117923607 - Mmc1_0291 - FAD dependent oxidoreductase 290 56.17 0 332469..333011 - 180 117923608 - Mmc1_0292 - hypothetical protein 291 55.27 0 333465..335834 + 789 117923609 - Mmc1_0293 - TPR repeat-containing protein 292 58.10 0 335845..336171 - 108 117923610 - Mmc1_0294 - hypothetical protein 293 56.94 0 336285..337940 - 551 117923611 - Mmc1_0295 - chaperonin GroEL 294 51.02 0 338016..338309 - 97 117923612 - Mmc1_0296 - chaperonin Cpn10 295 55.93 0 338740..339885 - 381 117923613 - Mmc1_0297 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 296 49.63 -1 340981..343680 - 899 117923614 - Mmc1_0298 - periplasmic sensor hybrid histidine kinase 297 57.71 0 343683..344162 - 159 117923615 - Mmc1_0299 - hypothetical protein 298 53.86 0 344509..345882 - 457 117923616 - Mmc1_0300 - two component, sigma54 specific, Fis family transcriptional regulator 299 52.23 0 345888..348623 - 911 117923617 - Mmc1_0301 - TPR repeat-containing protein 300 51.22 0 348623..349684 - 353 117923618 - Mmc1_0302 - sigma-54 dependent trancsriptional regulator 301 55.03 0 350214..351236 + 340 117923619 - Mmc1_0303 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 302 57.49 0 351233..352627 + 464 117923620 - Mmc1_0304 - diguanylate cyclase 303 57.29 0 352637..353521 + 294 117923621 - Mmc1_0305 - squalene/phytoene synthase 304 57.44 0 353518..354384 + 288 117923622 - Mmc1_0306 - squalene/phytoene synthase 305 62.29 +1 354371..355717 + 448 117923623 - Mmc1_0307 - amine oxidase 306 50.94 0 355731..356639 + 302 117923624 - Mmc1_0308 - DNA uptake lipoprotein-like protein 307 58.44 0 356719..357849 + 376 117923625 - Mmc1_0309 - RND family efflux transporter MFP subunit 308 51.73 0 357893..360877 - 994 117923626 - Mmc1_0310 - methyl-accepting chemotaxis sensory transducer 309 56.85 0 360992..362356 - 454 117923627 - Mmc1_0311 - periplasmic sensor signal transduction histidine kinase 310 56.16 0 362353..363018 - 221 117923628 - Mmc1_0312 - two component transcriptional regulator 311 56.29 0 363021..363338 - 105 117923629 - Mmc1_0313 - membrane protein 312 52.68 0 363331..363909 - 192 117923630 - Mmc1_0314 - hypothetical protein 313 56.18 0 363925..364296 - 123 117923631 - Mmc1_0315 - hypothetical protein 314 56.77 0 364293..364868 - 191 117923632 - Mmc1_0316 - cytochrome B561 315 44.95 -2 365328..371249 + 1973 117923633 - Mmc1_0317 - superfamily I DNA/RNA helicase 316 52.02 0 371461..371931 - 156 117923634 - Mmc1_0318 - transposase IS66 317 50.88 0 372074..372415 + 113 117923635 - Mmc1_0319 - hypothetical protein 318 50.56 0 372415..372774 + 119 117923636 - Mmc1_0320 - IS66 Orf2 family protein 319 52.94 0 372810..374390 + 526 117923637 - Mmc1_0321 - transposase IS66 320 53.16 0 374290..375474 - 394 117923638 - Mmc1_0322 - transposase IS66 321 50.56 0 375510..375869 - 119 117923639 - Mmc1_0323 - IS66 Orf2 family protein 322 50.88 0 375869..376210 - 113 117923640 - Mmc1_0324 - hypothetical protein 323 52.98 0 376826..378067 - 413 117923641 - Mmc1_0326 - hypothetical protein 324 52.65 0 378341..378982 + 213 117923642 - Mmc1_0327 - 3'-5' exonuclease 325 61.56 +1 378995..379738 + 247 117923643 - Mmc1_0328 - short-chain dehydrogenase/reductase SDR 326 51.97 0 379735..380115 + 126 117923644 - Mmc1_0329 - dihydroneopterin aldolase 327 59.56 +1 380144..380692 + 182 117923645 - Mmc1_0330 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 328 52.53 0 380721..383252 + 843 117923646 - Mmc1_0331 - PAS/PAC sensor hybrid histidine kinase 329 58.44 0 383425..384834 - 469 117923647 - Mmc1_0332 - phosphomannomutase 330 54.59 0 384839..386155 - 438 117923648 - Mmc1_0333 - UDP-glucose 6-dehydrogenase 331 55.36 0 386473..387144 - 223 117923649 - Mmc1_0334 - methyltransferase type 11 332 52.49 0 387132..388013 - 293 117923650 - Mmc1_0335 - UDP-glucose pyrophosphorylase 333 53.33 0 388146..388535 - 129 117923651 - Mmc1_0336 - transmembrane region and signal peptide prediction 334 57.75 0 389056..390300 + 414 117923652 - Mmc1_0337 - tryptophan synthase subunit beta 335 56.92 0 390297..391076 + 259 117923653 trpA Mmc1_0338 - tryptophan synthase subunit alpha 336 54.78 0 391210..392286 - 358 117923654 - Mmc1_0339 - hypothetical protein 337 55.56 0 392443..393855 - 470 117923655 - Mmc1_0340 - two component, sigma54 specific, Fis family transcriptional regulator 338 51.72 0 394483..396081 + 532 117923656 - Mmc1_0341 - phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase 339 51.90 0 396405..397034 + 209 117923657 - Mmc1_0342 - hypothetical protein 340 53.55 0 397061..397525 - 154 117923658 - Mmc1_0343 - hypothetical protein 341 50.41 0 397822..398307 + 161 117923659 - Mmc1_0344 - XRE family transcriptional regulator 342 47.14 -1 398658..399041 + 127 117923660 - Mmc1_0345 - hypothetical protein 343 53.94 0 399227..400585 - 452 117923661 - Mmc1_0346 - tryptophan synthase subunit beta 344 56.91 0 400801..401589 + 262 117923662 - Mmc1_0347 - dienelactone hydrolase 345 52.52 0 401760..402374 - 204 117923663 - Mmc1_0348 - lytic transglycosylase, catalytic 346 51.09 0 402539..403135 - 198 117923664 - Mmc1_0349 - peptidyl-prolyl cis-trans isomerase, cyclophilin type 347 52.16 0 403543..404445 + 300 117923665 - Mmc1_0350 - Ppx/GppA phosphatase 348 54.06 0 404673..405140 - 155 117923666 - Mmc1_0351 - 17 kDa surface antigen 349 50.99 0 405437..406546 + 369 117923667 - Mmc1_0352 - RelA/SpoT domain-containing protein 350 54.26 0 406650..407189 + 179 117923668 - Mmc1_0353 - hypothetical protein 351 49.70 -1 407300..407629 - 109 117923669 - Mmc1_0354 - glutaredoxin-like protein 352 48.15 -1 407661..407903 - 80 117923670 - Mmc1_0355 - BolA family protein 353 49.88 -1 408250..409083 - 277 117923671 - Mmc1_0356 - cytochrome c1 354 51.74 0 409103..410308 - 401 117923672 - Mmc1_0357 - cytochrome b/b6 domain-containing protein 355 54.75 0 410344..410880 - 178 117923673 - Mmc1_0358 - ubiquinol-cytochrome c reductase, iron-sulfur subunit 356 55.05 0 411082..411606 + 174 117923674 - Mmc1_0359 - tRNA/rRNA methyltransferase (SpoU) 357 58.61 +1 411709..413160 + 483 117923675 - Mmc1_0360 - phosphoglucosamine mutase 358 55.26 0 413297..414304 + 335 117923676 - Mmc1_0361 - hypothetical protein 359 55.90 0 414288..416702 + 804 117923677 - Mmc1_0362 - TPR repeat-containing protein 360 53.67 0 416837..418783 + 648 117923678 - Mmc1_0363 - threonyl-tRNA synthetase 361 51.37 0 418910..419458 + 182 117923679 - Mmc1_0364 - translation initiation factor 3 362 49.49 -1 419701..419898 + 65 117923680 - Mmc1_0365 - 50S ribosomal protein L35P 363 51.13 0 420008..420361 + 117 117923681 - Mmc1_0366 - 50S ribosomal protein L20P 364 53.01 0 421259..422305 + 348 117923682 - Mmc1_0367 - phenylalanyl-tRNA synthetase, alpha subunit 365 58.59 +1 422398..424788 + 796 117923683 - Mmc1_0368 - phenylalanyl-tRNA synthetase beta subunit 366 54.17 0 424942..426558 - 538 117923684 - Mmc1_0369 - phosphoenolpyruvate carboxykinase 367 58.62 +1 427075..428205 - 376 117923685 - Mmc1_0370 - peptidase M23B 368 55.79 0 428193..428771 - 192 117923686 - Mmc1_0371 - hypothetical protein 369 61.57 +1 428780..429466 - 228 117923687 - Mmc1_0372 - protein-L-isoaspartate O-methyltransferase 370 57.60 0 429448..430197 - 249 117923688 - Mmc1_0373 - 5'-nucleotidase / 3'-nucleotidase / exopolyphosphatase 371 59.62 +1 430516..431466 - 316 117923689 - Mmc1_0374 - hypothetical protein 54.32 MEAN 4.16 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0