version 1.0
Magnetococcus sp. MC-1, complete genome - 1..4719581 3716 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 90 54.55 0 93846..94439 + 197 117923408 - Mmc1_0090 - shikimate kinase 91 58.16 0 95149..95442 + 97 117923409 - Mmc1_0091 - hypothetical protein 92 48.45 -1 95540..95830 - 96 117923410 - Mmc1_0092 - integration host factor, alpha subunit 93 55.68 0 96408..97709 + 433 117923411 - Mmc1_0093 - glutamate-1-semialdehyde 2,1-aminomutase 94 57.37 0 97882..99483 - 533 117923412 - Mmc1_0094 - hypothetical protein 95 53.80 0 99703..100650 + 315 117923413 - Mmc1_0095 - beta-lactamase domain-containing protein 96 58.16 0 100922..101356 - 144 117923414 - Mmc1_0096 - hypothetical protein 97 58.67 +1 101607..102569 + 320 117923415 - Mmc1_0097 - sigma-54 dependent trancsriptional regulator 98 59.74 +1 102678..103601 - 307 117923416 - Mmc1_0098 - dihydroorotate oxidase B, electron transfer subunit 99 53.78 0 103804..104160 - 118 117923417 - Mmc1_0099 - hypothetical protein 100 56.01 0 104173..104538 - 121 117923418 - Mmc1_0100 - nitrogen regulatory protein P-II 101 54.37 0 104535..106340 - 601 117923419 - Mmc1_0101 - hypothetical protein 102 60.53 +1 106509..107795 - 428 117923420 - Mmc1_0102 - dihydroorotase 103 57.88 0 107792..108781 - 329 117923421 - Mmc1_0103 - aspartate carbamoyltransferase 104 56.10 0 108831..109379 - 182 117923422 - Mmc1_0104 - phosphoribosyltransferase 105 59.41 +1 109450..110055 + 201 117923423 - Mmc1_0105 - NUDIX hydrolase 106 59.30 +1 110180..111577 + 465 117923424 - Mmc1_0106 - hypothetical protein 107 58.54 +1 111585..112298 - 237 117923425 - Mmc1_0107 - hypothetical protein 108 58.55 +1 112295..113317 - 340 117923426 - Mmc1_0108 - hypothetical protein 109 54.32 0 113431..113673 + 80 117923427 - Mmc1_0109 - hypothetical protein 110 57.04 0 114158..115123 + 321 117923428 - Mmc1_0110 - permease 111 60.68 +1 115146..115379 + 77 117923429 - Mmc1_0111 - thiol-disulfide isomerase and thioredoxins 112 50.04 -1 115802..117094 + 430 117923430 - Mmc1_0112 - hypothetical protein 113 50.78 0 117099..117803 + 234 117923431 - Mmc1_0113 - hypothetical protein 114 54.18 0 118832..120241 + 469 117923432 - Mmc1_0116 - hypothetical protein 115 57.32 0 120076..121734 - 552 117923433 - Mmc1_0117 - putative nitric oxide reductase activation protein 116 57.50 0 121739..122698 - 319 117923434 - Mmc1_0118 - iron-sulfur cluster-binding protein 117 56.95 0 122737..123549 - 270 117923435 - Mmc1_0119 - ATPase 118 55.39 0 123629..125011 - 460 117923436 - Mmc1_0120 - cytochrome c oxidase, subunit I 119 51.47 0 125025..125465 - 146 117923437 - Mmc1_0121 - nitric-oxide reductase 120 45.61 -2 126903..127619 - 238 117923438 - Mmc1_0122 - hypothetical protein 121 53.07 0 127974..128348 + 124 117923439 - Mmc1_0123 - hypothetical protein 122 54.90 0 128914..131037 + 707 117923440 - Mmc1_0124 - translation elongation factor G 123 51.14 0 131289..131552 + 87 117923441 - Mmc1_0125 - hypothetical protein 124 54.47 0 131620..132234 + 204 117923442 - Mmc1_0126 - hypothetical protein 125 56.39 0 133279..134679 + 466 117923443 - Mmc1_0127 - peptidase M16 domain-containing protein 126 47.29 -1 134709..135095 - 128 117923444 - Mmc1_0128 - hypothetical protein 127 57.43 0 135318..136931 - 537 117923445 - Mmc1_0129 - type I restriction-modification system, M subunit 128 54.04 0 136928..138028 - 366 117923446 - Mmc1_0130 - anticodon nuclease 129 59.82 +1 138025..139032 - 335 117923447 - Mmc1_0131 - DNA-binding protein 130 47.43 -1 139029..140312 - 427 117923448 - Mmc1_0132 - restriction modification system DNA specificity subunit 131 58.98 +1 140391..141236 - 281 117923449 dinD Mmc1_0133 - DNA-damage-inducible protein D 132 56.23 0 141254..144301 - 1015 117923450 - Mmc1_0134 - HsdR family type I site-specific deoxyribonuclease 133 56.91 0 144686..145177 - 163 117923451 - Mmc1_0135 - methylated-DNA--protein-cysteine methyltransferase 134 51.90 0 145506..145715 - 69 117923452 - Mmc1_0136 - 50S ribosomal protein L31P 135 54.66 0 145879..147144 - 421 117923453 rho Mmc1_0137 - transcription termination factor Rho 136 58.31 0 147442..148494 + 350 117923454 - Mmc1_0138 - pseudouridylate synthase 137 56.14 0 148539..149393 - 284 117923455 - Mmc1_0139 - oxidoreductase FAD/NAD(P)-binding subunit 138 59.38 +1 149649..150197 + 182 117923456 - Mmc1_0140 - hypothetical protein 139 57.47 0 150542..151063 + 173 117923457 - Mmc1_0141 - hypothetical protein 140 53.83 0 151501..152022 + 173 117923458 - Mmc1_0142 - peptide deformylase 141 59.64 +1 152019..152957 + 312 117923459 - Mmc1_0143 - methionyl-tRNA formyltransferase 142 58.98 +1 153069..153914 + 281 117923460 - Mmc1_0144 - HtpX-2 peptidase 143 55.37 0 153996..154907 - 303 117923461 - Mmc1_0145 - hypothetical protein 144 50.98 0 155144..156010 - 288 117923462 - Mmc1_0146 - hypothetical protein 145 57.00 0 156172..158757 - 861 117923463 - Mmc1_0147 - ATPase 146 56.07 0 158901..159929 + 342 117923464 - Mmc1_0148 - polysaccharide deacetylase 147 55.67 0 159960..160250 + 96 117923465 - Mmc1_0149 - hypothetical protein 148 60.05 +1 160250..161941 + 563 117923466 - Mmc1_0150 - FkbH like protein 149 56.95 0 161928..162956 + 342 117923467 - Mmc1_0151 - hypothetical protein 150 48.15 -1 163172..163576 + 134 117923468 - Mmc1_0152 - anti-sigma-factor antagonist 151 49.52 -1 163846..164055 + 69 117923469 - Mmc1_0153 - hypothetical protein 152 52.54 0 164855..165130 + 91 117923470 - Mmc1_0154 - hypothetical protein 153 44.44 -2 165365..165859 - 164 117923471 - Mmc1_0155 - hypothetical protein 154 48.49 -1 166168..167097 + 309 117923472 - Mmc1_0156 - type IV pilus assembly PilZ 155 58.41 0 167323..168606 - 427 117923473 - Mmc1_0157 - nucleoside recognition domain-containing protein 156 51.45 0 169785..170987 - 400 117923474 - Mmc1_0158 - hypothetical protein 157 52.83 0 171166..173550 - 794 117923475 - Mmc1_0159 - AsmA family protein 158 55.31 0 173579..174511 - 310 117923476 - Mmc1_0160 - NAD-dependent epimerase/dehydratase 159 53.81 0 174594..175565 - 323 117923477 - Mmc1_0161 - hypothetical protein 160 58.50 +1 175862..176632 - 256 117923478 - Mmc1_0162 - hypothetical protein 161 52.51 0 177972..178988 - 338 117923479 - Mmc1_0163 - thiamine-monophosphate kinase 162 53.82 0 178991..179488 - 165 117923480 - Mmc1_0164 - NusB antitermination factor 163 49.68 -1 179498..179968 - 156 117923481 - Mmc1_0165 - 6,7-dimethyl-8-ribityllumazine synthase 164 52.65 0 179987..181213 - 408 117923482 - Mmc1_0166 - 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II 165 56.25 0 181224..181895 - 223 117923483 - Mmc1_0167 - riboflavin synthase subunit alpha 166 57.65 0 182103..183233 - 376 117923484 - Mmc1_0168 - diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase 167 55.32 0 183412..184680 - 422 117923485 - Mmc1_0169 - serine hydroxymethyltransferase 168 59.96 +1 184748..185194 - 148 117923486 - Mmc1_0170 - ribose-5-phosphate isomerase 169 55.13 0 185502..186671 + 389 117923487 - Mmc1_0171 - glycosyl transferase, group 1 170 53.77 0 186895..188607 - 570 117923488 - Mmc1_0172 - SSU ribosomal protein S1P 171 58.11 0 188971..189648 - 225 117923489 - Mmc1_0173 - cytidylate kinase 172 59.79 +1 189641..190978 - 445 117923490 - Mmc1_0174 - 3-phosphoshikimate 1-carboxyvinyltransferase 173 54.36 0 192502..193395 - 297 117923491 - Mmc1_0175 - prephenate dehydrogenase 174 55.28 0 193405..194511 - 368 117923492 - Mmc1_0176 - chorismate mutase / prephenate dehydratase 175 56.60 0 194853..196163 + 436 117923493 - Mmc1_0177 - ammonium transporter 176 58.91 +1 196232..197314 - 360 117923494 - Mmc1_0178 - hypothetical protein 177 58.52 +1 197339..198001 - 220 117923495 - Mmc1_0179 - hypothetical protein 178 56.35 0 197982..198572 - 196 117923496 - Mmc1_0180 - hypothetical protein 179 56.17 0 198575..198955 - 126 117923497 - Mmc1_0181 - hypothetical protein 180 52.17 0 198968..199864 - 298 117923498 - Mmc1_0182 - hypothetical protein 181 55.09 0 199864..200442 - 192 117923499 - Mmc1_0183 - hypothetical protein 182 56.36 0 200822..202267 - 481 117923500 - Mmc1_0184 - hypothetical protein 183 51.55 0 202264..202779 - 171 117923501 - Mmc1_0185 - hypothetical protein 184 53.68 0 202776..204407 - 543 117923502 - Mmc1_0186 - hypothetical protein 185 46.99 -1 204404..204901 - 165 117923503 - Mmc1_0187 - lytic transglycosylase, catalytic 186 72.59 +2 205097..205366 - 89 117923504 - Mmc1_0188 - CG10910 gene product from transcript CG10910-RB 187 57.07 0 205704..206516 - 270 117923505 - Mmc1_0189 - lytic transglycosylase, catalytic 188 49.48 -1 206550..206840 - 96 117923506 - Mmc1_0190 - hypothetical protein 189 51.32 0 206837..207253 - 138 117923507 - Mmc1_0191 - hypothetical protein 54.32 MEAN 4.16 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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