version 1.0
Listeria monocytogenes str. 4b F2365, complete genome - 1..2905187 2821 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 236 42.37 +1 239677..240672 + 331 85700164 - LMOf2365_0239 - dihydrouridine synthase family protein 237 39.14 0 240787..242283 + 498 46906461 lysS LMOf2365_0240 - lysyl-tRNA synthetase 238 31.37 -1 253816..254274 + 152 46906462 ctsR LMOf2365_0241 - transcriptional regulator CtsR 239 39.69 0 254287..254805 + 172 46906463 - LMOf2365_0242 - UVR domain-containing protein 240 36.75 0 254802..255824 + 340 46906464 - LMOf2365_0243 - ATP:guanido phosphotransferase 241 40.40 0 255853..258315 + 820 46906465 - LMOf2365_0244 - ClpC ATPase 242 41.92 +1 258462..259835 + 457 46906466 radA LMOf2365_0245 - DNA repair protein RadA 243 35.38 0 259968..261041 + 357 46906467 - LMOf2365_0246 - PIN/TRAM domain-containing protein 244 41.77 +1 261061..261759 + 232 46906468 ispD LMOf2365_0247 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 245 42.19 +1 261752..262225 + 157 46906469 ispF LMOf2365_0248 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 246 37.94 0 262244..263719 + 491 46906470 gltX LMOf2365_0249 - glutamyl-tRNA synthetase 247 43.74 +1 264118..264732 + 204 46906471 cysE LMOf2365_0250 - serine O-acetyltransferase 248 40.40 0 264739..266154 + 471 46906472 cysS LMOf2365_0251 - cysteinyl-tRNA synthetase 249 41.08 0 266158..266583 + 141 46906473 - LMOf2365_0252 - hypothetical protein 250 40.74 0 266567..267322 + 251 46906474 - LMOf2365_0253 - RNA methyltransferase 251 40.74 0 267325..267837 + 170 46906475 - LMOf2365_0254 - hypothetical protein 252 37.46 0 267918..268523 + 201 46906476 sigH LMOf2365_0255 - RNA polymerase factor sigma-70 253 39.33 0 268627..268776 + 49 46906477 rpmG LMOf2365_0256 - 50S ribosomal protein L33 254 31.67 -1 268796..268975 + 59 46906478 secE LMOf2365_0257 - preprotein translocase subunit SecE 255 38.76 0 269105..269638 + 177 46906479 nusG LMOf2365_0258 - transcription antitermination protein NusG 256 35.67 0 269693..270163 + 156 46906480 - LMOf2365_0259 - hypothetical protein 257 40.85 0 270290..270715 + 141 46906481 rplK LMOf2365_0260 - 50S ribosomal protein L11 258 40.14 0 270755..271444 + 229 46906482 rplA LMOf2365_0261 - 50S ribosomal protein L1 259 39.92 0 271692..272192 + 166 46906483 rplJ LMOf2365_0262 - 50S ribosomal protein L10 260 39.12 0 272271..272633 + 120 46906484 rplL LMOf2365_0263 - 50S ribosomal protein L7/L12 261 38.05 0 272767..273381 + 204 46906485 - LMOf2365_0264 - hypothetical protein 262 39.86 0 273728..274906 + 392 46906486 - LMOf2365_0265 - hypothetical protein 263 35.04 0 275051..276046 + 331 46906487 - LMOf2365_0266 - DegA family transcriptional regulator 264 38.22 0 276184..277410 + 408 46906488 - LMOf2365_0267 - sugar ABC transporter, sugar-binding protein 265 37.14 0 277428..278765 + 445 46906489 - LMOf2365_0268 - sugar ABC transporter, permease protein 266 33.81 -1 278767..279597 + 276 46906490 - LMOf2365_0269 - sugar ABC transporter, permease protein 267 37.22 0 279612..281309 + 565 46906491 malL-2 LMOf2365_0270 - oligo-1,6-glucosidase 268 32.92 -1 281310..282752 + 480 46906492 gtfA LMOf2365_0271 - sucrose phosphorylase 269 30.08 -2 282818..283063 + 81 46906493 - LMOf2365_0272 - hypothetical protein 270 36.19 0 283072..283176 + 34 46906494 - LMOf2365_0273 - hypothetical protein 271 42.00 +1 283309..286863 + 1184 46906495 rpoB LMOf2365_0274 - DNA-directed RNA polymerase subunit beta 272 41.51 +1 287034..290639 + 1201 46906496 rpoC LMOf2365_0275 - DNA-directed RNA polymerase subunit beta' 273 40.23 0 290739..291260 + 173 46906497 - LMOf2365_0276 - hypothetical protein 274 40.66 0 291326..292786 + 486 46906498 - LMOf2365_0277 - glycosy hydrolase family protein 275 30.63 -2 293001..293444 + 147 46906499 - LMOf2365_0278 - hypothetical protein 276 27.44 -2 293496..295157 + 553 46906500 - LMOf2365_0279 - ABC transporter, ATP-binding protein, putative 277 28.83 -2 295154..296929 + 591 46906501 - LMOf2365_0280 - ABC transporter, ATP-binding/permease protein 278 37.28 0 297720..299366 + 548 46906502 inlC2 LMOf2365_0281 - internalin C2 279 36.56 0 299575..301281 + 568 46906503 inlD LMOf2365_0282 - internalin D 280 36.27 0 301493..302992 + 499 46906504 inlE LMOf2365_0283 - internalin E 281 38.25 0 303126..304265 + 379 161611353 - LMOf2365_0284 - succinyl-diaminopimelate desuccinylase 282 39.09 0 304412..304828 + 138 46906506 - LMOf2365_0285 - MarR family transcriptional regulator 283 42.60 +1 304835..305794 + 319 46906507 - LMOf2365_0286 - glyoxalase family protein 284 42.61 +1 305866..306501 + 211 46906508 - LMOf2365_0287 - phosphoglycerate mutase family protein 285 41.23 0 306585..308471 + 628 46906509 - LMOf2365_0288 - transporter, putative 286 34.35 0 308500..309585 - 361 46906510 - LMOf2365_0289 - leucine-rich repeat-containing protein 287 39.23 0 309719..310345 - 208 46906511 - LMOf2365_0290 - hypothetical protein 288 40.92 0 310346..311782 - 478 46906512 - LMOf2365_0291 - glycosy hydrolase family protein 289 38.13 0 311902..312714 - 270 46906513 - LMOf2365_0292 - HAD superfamily hydrolase 290 37.50 0 312850..313353 + 167 46906514 - LMOf2365_0293 - acetyltransferase 291 33.18 -1 313390..314052 - 220 46906515 - LMOf2365_0294 - hypothetical protein 292 37.13 0 314310..315152 - 280 46906516 - LMOf2365_0295 - competence protein ComEC/Rec2-related protein 293 38.32 0 315169..315990 - 273 46906517 - LMOf2365_0296 - HAD superfamily hydrolase 294 38.58 0 316106..317077 + 323 46906518 - LMOf2365_0297 - Gfo/Idh/MocA family oxidoreductase 295 38.33 0 317115..318215 - 366 46906519 - LMOf2365_0298 - sugar ABC transporter, ATP-binding protein 296 39.61 0 318506..320656 + 716 46906520 nrdD LMOf2365_0299 - anaerobic ribonucleoside triphosphate reductase 297 45.65 +2 320649..321200 + 183 46906521 nrdG LMOf2365_0300 - anaerobic ribonucleoside-triphosphate reductase activating protein 298 31.99 -1 321344..322015 - 223 46906522 - LMOf2365_0301 - hypothetical protein 299 39.10 0 322180..322959 - 259 46906523 - LMOf2365_0302 - carbon-nitrogen family hydrolase 300 40.42 0 323049..323711 - 220 46906524 - LMOf2365_0303 - ABC transporter, permease protein 301 41.20 0 323708..324724 - 338 46906525 - LMOf2365_0304 - ABC transporter, ATP-binding protein 302 35.64 0 324739..325560 - 273 46906526 - LMOf2365_0305 - ABC transporter, substrate-binding protein, putative 303 40.44 0 325941..327122 + 393 46906527 - LMOf2365_0306 - transaminase 304 39.36 0 327335..328048 + 237 46906528 - LMOf2365_0307 - DNA-binding response regulator 305 39.66 0 328233..330065 + 610 46906529 - LMOf2365_0308 - sensory box histidine kinase 306 35.37 0 330062..331384 + 440 46906530 - LMOf2365_0309 - hypothetical protein 307 36.90 0 331387..332226 + 279 46906531 - LMOf2365_0310 - hypothetical protein 308 38.27 0 332347..333177 + 276 46906532 - LMOf2365_0311 - metallo-beta-lactamase family protein 309 39.79 0 333275..334777 + 500 46906533 - LMOf2365_0312 - serine protease 310 38.54 0 335107..335202 + 31 46906534 - LMOf2365_0313 - hypothetical protein 311 46.04 +2 335465..335944 + 159 46906535 - LMOf2365_0314 - SPOUT methyltransferase superfamily protein 312 33.33 -1 335976..336839 - 287 46906536 - LMOf2365_0315 - LysR family transcriptional regulator 313 32.79 -1 336958..337695 + 245 46906537 - LMOf2365_0316 - nitroreductase family protein 314 41.94 +1 337906..338544 + 212 46906538 - LMOf2365_0317 - hypothetical protein 315 38.25 0 338549..340420 - 623 46906539 - LMOf2365_0318 - PRD/PTS system IIA 2 domain-containing protein 316 42.54 +1 340519..341832 - 437 46906540 - LMOf2365_0319 - PTS system, IIC component 317 43.30 +1 341837..342127 - 96 46906541 - LMOf2365_0320 - PTS system, cellobiose-specific, IIB component 318 43.53 +1 342144..343535 - 463 46906542 - LMOf2365_0321 - glycosy hydrolase family protein 319 42.69 +1 343528..343869 - 113 46906543 - LMOf2365_0322 - PTS system, beta-glucoside-specific, IIA component 320 26.44 -2 343921..344007 + 28 46906544 - LMOf2365_0323 - hypothetical protein 321 30.40 -2 344509..346176 - 555 46906545 - LMOf2365_0325 - type II restriction enzyme Sau3AI, putative 322 32.85 -1 346304..346510 + 68 46906546 - LMOf2365_0326 - DNA-binding protein 323 32.98 -1 346513..347922 + 469 46906547 - LMOf2365_0327 - C-5 cytosine-specific DNA methylase family protein 324 27.84 -2 348172..349026 + 284 46906548 - LMOf2365_0328 - hypothetical protein 325 30.81 -1 349247..349801 + 184 46906549 - LMOf2365_0329 - putative lipoprotein 326 43.52 +1 349992..351071 + 359 46906550 - LMOf2365_0330 - threonine aldolase family protein 327 32.03 -1 351321..352241 + 306 46906551 - LMOf2365_0331 - M48 family peptidase 328 46.06 +2 352266..353051 + 261 46906552 - LMOf2365_0332 - hypothetical protein 329 46.52 +2 353274..353948 + 224 46906553 - LMOf2365_0333 - TENA/THI-4 family protein 330 48.50 +2 353953..354750 + 265 46906554 thiM LMOf2365_0334 - hydroxyethylthiazole kinase 331 45.27 +2 354747..355550 + 267 46906555 thiD-1 LMOf2365_0335 - phosphomethylpyrimidine kinase 332 46.51 +2 355547..356191 + 214 46906556 thiE LMOf2365_0336 - thiamine-phosphate pyrophosphorylase 333 42.16 +1 356218..357633 - 471 46906557 bglH-1 LMOf2365_0337 - beta-glucosidase 334 39.95 0 357848..359116 - 422 46906558 - LMOf2365_0338 - cell wall surface anchor family protein 335 40.15 0 359444..360103 + 219 46906559 - LMOf2365_0339 - hypothetical protein 37.91 MEAN 3.60 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0