IslandPathversion 1.0

IslandPath Analysis: Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 37.86 STD DEV: 3.35
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293, complete genome - 1..2038396
1970 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1332	 39.22	0	1403464..1406472	-	1002	116618506	-	LEUM_1411	-	hypothetical protein
1333	 34.40	-1	1406628..1407659	-	343	116618507	-	LEUM_1412	-	polysaccharide biosynthesis protein (putative)
1334	 39.65	0	1407720..1409033	-	437	116618508	-	LEUM_1413	-	Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
1335	 36.86	0	1409079..1409588	-	169	116618509	-	LEUM_1414	-	lipoprotein
1336	 32.54	-1	1409693..1410700	-	335	116618510	-	LEUM_1415	-	hypothetical protein
1337	 32.00	-1	1410823..1411872	-	349	116618511	-	LEUM_1416	-	cell surface protein
1338	 36.54	0	1411901..1412680	-	259	116618512	-	LEUM_1417	-	cell surface protein
1339	 38.35	0	1412673..1413071	-	132	116618513	-	LEUM_1418	-	hypothetical protein
1340	 35.29	0	1413080..1414612	-	510	116618514	-	LEUM_1419	-	hypothetical protein
1341	 46.43	+2	1414997..1415836	-	279	116618515	-	LEUM_1420	-	dTDP-4-dehydrorhamnose reductase
1342	 42.00	+1	1415885..1416922	-	345	116618516	-	LEUM_1421	-	dTDP-glucose 4,6-dehydratase
1343	 40.91	0	1416936..1417529	-	197	116618517	-	LEUM_1422	-	dTDP-4-dehydrorhamnose 3,5-epimerase related enzyme
1344	 40.18	0	1417539..1418414	-	291	116618518	-	LEUM_1423	-	glucose-1-phosphate thymidylyltransferase
1345	 37.82	0	1418467..1419624	-	385	116618519	-	LEUM_1424	-	glycosyltransferase-like protein
1346	 27.80	-2	1420556..1421965	-	469	116618520	-	LEUM_1425	-	polysaccharide transporter
1347	 29.69	-2	1421958..1423001	-	347	116618521	-	LEUM_1426	-	exopolysaccharide biosynthesis protein
1348	 29.29	-2	1423023..1424111	-	362	116618522	-	LEUM_1427	-	hypothetical protein
1349	 30.25	-2	1424140..1425111	-	323	116618523	-	LEUM_1428	-	glycosyltransferase-like protein
1350	 31.50	-1	1425108..1426034	-	308	116618524	-	LEUM_1429	-	lipopolysaccharide biosynthesis glycosyltransferase
1351	 31.36	-1	1426031..1426993	-	320	116618525	-	LEUM_1430	-	hypothetical protein
1352	 29.32	-2	1427020..1427991	-	323	116618526	-	LEUM_1431	-	glycosyltransferase-like protein
1353	 32.04	-1	1428010..1429170	-	386	116618527	-	LEUM_1432	-	glycosyltransferase
1354	 33.85	-1	1429163..1429747	-	194	116618528	-	LEUM_1433	-	lipopolysaccharide synthesis sugar transferase
1355	 42.03	+1	1429783..1430541	-	252	116618529	-	LEUM_1434	-	tyrosine-protein kinase
1356	 38.26	0	1430560..1431453	-	297	116618530	-	LEUM_1435	-	capsular polysaccharide biosynthesis protein
1357	 38.26	0	1431476..1432246	-	256	116618531	-	LEUM_1436	-	capsular polysaccharide biosynthesis protein
1358	 44.74	+2	1432348..1433136	-	262	116618532	-	LEUM_1437	-	methionine aminopeptidase, type I
1359	 40.19	0	1433252..1434214	-	320	116618533	-	LEUM_1438	-	transcriptional regulator
1360	 41.83	+1	1434347..1434958	-	203	116618534	-	LEUM_1439	-	Uracil phosphoribosyltransferase
1361	 42.05	+1	1435130..1436482	-	450	116618535	-	LEUM_1440	-	branched-chain amino acid permease
1362	 43.81	+1	1436853..1437272	-	139	116618536	-	LEUM_1441	-	50S ribosomal protein L20P
1363	 46.46	+2	1437317..1437514	-	65	116618537	-	LEUM_1442	-	50S ribosomal protein L35P
1364	 43.52	+1	1437580..1438011	-	143	116618538	-	LEUM_1443	-	translation initiation factor 3
1365	 35.94	0	1438268..1438918	-	216	116618539	-	LEUM_1444	-	hypothetical protein
1366	 41.26	+1	1439249..1440043	+	264	116618540	-	LEUM_1445	-	nicotinamide mononucleotide transporter
1367	 43.10	+1	1440140..1440313	+	57	116618541	-	LEUM_1446	-	50S ribosomal protein L32P
1368	 40.28	0	1440373..1441005	+	210	116618542	-	LEUM_1447	-	copper resistance protein
1369	 38.79	0	1441046..1441687	+	213	116618543	-	LEUM_1448	-	nucleoside-diphosphate-sugar epimerase
1370	 37.14	0	1441751..1442065	-	104	116618544	-	LEUM_1449	-	small membrane protein
1371	 40.88	0	1442278..1442847	+	189	116618545	-	LEUM_1450	-	peroxiredoxin
1372	 40.88	0	1442858..1444567	+	569	116618546	-	LEUM_1451	-	Alkyl hydroperoxide reductase, large subunit
1373	 40.00	0	1444762..1446456	+	564	116618547	-	LEUM_1452	-	fibronectin-binding protein
1374	 32.94	-1	1446506..1447264	-	252	116618548	-	LEUM_1453	-	SAM-dependent methyltransferase
1375	 35.02	0	1447245..1448252	-	335	116618549	-	LEUM_1454	-	thymidylate synthase
1376	 35.88	0	1448277..1448747	-	156	116618550	-	LEUM_1455	-	nucleoside 2-deoxyribosyltransferase
1377	 39.63	0	1449343..1451709	+	788	116618551	-	LEUM_1456	-	putative phosphoketolase
1378	 38.15	0	1451794..1452810	-	338	116618552	-	LEUM_1457	-	ornithine carbamoyltransferase
1379	 39.99	0	1452810..1454192	-	460	116618553	-	LEUM_1458	-	argininosuccinate lyase
1380	 40.42	0	1454248..1455474	-	408	116618554	-	LEUM_1459	-	argininosuccinate synthase
1381	 38.63	0	1455664..1456947	-	427	116618555	-	LEUM_1460	-	adenylosuccinate synthetase
1382	 43.57	+1	1457292..1458014	-	240	116618556	-	LEUM_1461	-	hypothetical protein
1383	 39.26	0	1458099..1458587	-	162	116618557	-	LEUM_1462	-	phosphatidylglycerophosphatase A
1384	 38.85	0	1458604..1459782	-	392	116618558	-	LEUM_1463	-	D-3-phosphoglycerate dehydrogenase
1385	 37.92	0	1459779..1460867	-	362	116618559	-	LEUM_1464	-	phosphoserine aminotransferase
1386	 42.71	+1	1461235..1462215	-	326	116618560	-	LEUM_1466	-	phosphotransacetylase
1387	 42.23	+1	1462321..1462983	-	220	116618561	-	LEUM_1467	-	uracil-DNA glycosylase
1388	 37.22	0	1463032..1463571	+	179	116618562	-	LEUM_1468	-	hypothetical protein
1389	 44.27	+1	1463613..1464755	-	380	116618563	-	LEUM_1469	-	membrane protein, putative toxin regulator
1390	 36.14	0	1465135..1465455	+	106	116618564	-	LEUM_1470	-	hypothetical protein
1391	 38.44	0	1465439..1466143	+	234	116618565	-	LEUM_1471	-	SAM-dependent methyltransferase
1392	 38.47	0	1466184..1467020	-	278	116618566	-	LEUM_1472	-	hypothetical protein
1393	 39.55	0	1467101..1467631	-	176	116618567	-	LEUM_1473	-	adenine phosphoribosyltransferase
1394	 38.41	0	1467666..1469633	-	655	116618568	-	LEUM_1474	-	single-stranded DNA-specific exonuclease
1395	 39.60	0	1469620..1470576	-	318	116618569	-	LEUM_1475	-	beta-lactamase superfamily hydrolase
1396	 39.73	0	1470702..1471217	-	171	116618570	-	LEUM_1476	-	peptide methionine sulfoxide reductase
1397	 36.59	0	1471278..1472291	-	337	116618571	-	LEUM_1477	-	ketopantoate reductase
1398	 43.03	+1	1472341..1473072	-	243	116618572	-	LEUM_1478	-	tRNA (Guanine37-N1) methyltransferase
1399	 35.06	0	1473072..1473593	-	173	116618573	-	LEUM_1479	-	16S rRNA processing protein RimM
1400	 35.40	0	1473669..1474151	-	160	116618574	-	LEUM_1480	-	methylated DNA-protein cysteine methyltransferase
1401	 38.21	0	1474202..1477894	-	1230	116618575	-	LEUM_1481	-	DNA helicase/exodeoxyribonuclease V, subunit A
1402	 38.56	0	1477894..1481373	-	1159	116618576	-	LEUM_1482	-	ATP-dependent nuclease, subunit B
1403	 37.88	0	1481373..1482164	-	263	116618577	-	LEUM_1483	-	esterase
1404	 35.63	0	1482252..1484033	-	593	116618578	-	LEUM_1484	-	hypothetical protein
1405	 41.19	0	1484134..1484553	-	139	116618579	-	LEUM_1485	-	SSU ribosomal protein S16P
1406	 34.83	0	1484692..1484892	-	66	116618580	-	LEUM_1486	-	hypothetical protein
1407	 39.74	0	1485039..1487831	-	930	116618581	-	LEUM_1487	-	isoleucyl-tRNA synthetase
1408	 40.27	0	1488141..1488803	-	220	116618582	-	LEUM_1488	-	cell division initiation protein
1409	 34.96	0	1488864..1489661	-	265	116618583	-	LEUM_1489	-	cell division protein
1410	 34.47	-1	1489658..1489921	-	87	116618584	-	LEUM_1490	-	cell division membrane protein
1411	 40.44	0	1489927..1490376	-	149	116618585	-	LEUM_1491	-	cell division protein
1412	 41.97	+1	1490386..1491693	-	435	116618586	-	LEUM_1492	-	cell division protein FtsZ
1413	 39.86	0	1491717..1493048	-	443	116618587	-	LEUM_1493	-	cell division protein FtsA
1414	 34.18	-1	1493140..1493844	-	234	116618588	-	LEUM_1494	-	cell division protein FtsQ
1415	 40.48	0	1493844..1494935	-	363	116618589	-	LEUM_1495	-	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
1416	 38.22	0	1494946..1496295	-	449	116618590	-	LEUM_1496	-	UDP-N-acetylmuramoylalanine--D-glutamate ligase
1417	 38.32	0	1496339..1497301	-	320	116618591	-	LEUM_1497	-	phospho-N-acetylmuramoyl-pentapeptide-transferase
1418	 38.27	0	1497311..1499437	-	708	116618592	-	LEUM_1498	-	cell division protein FtsI/penicillin-binding protein 2
1419	 38.21	0	1499452..1499820	-	122	116618593	-	LEUM_1499	-	cell division protein FtsL
1420	 40.26	0	1499879..1500817	-	312	116618594	-	LEUM_1500	-	SAM-dependent methyltransferase for cell envelope biogenesis
1421	 38.43	0	1500856..1501287	-	143	116618595	-	LEUM_1501	-	hypothetical protein
1422	 35.09	0	1501439..1501780	-	113	116618596	-	LEUM_1502	-	hypothetical protein
1423	 38.16	0	1501881..1502087	+	68	116618597	-	LEUM_1503	-	hypothetical protein
1424	 39.95	0	1502135..1503841	-	568	116618598	-	LEUM_1504	-	dihydroxyacetone kinase-like protein
1425	 36.53	0	1503850..1504224	-	124	116618599	-	LEUM_1505	-	hypothetical protein
1426	 43.78	+1	1504418..1504618	-	66	116618600	-	LEUM_1506	-	50S ribosomal protein L28P
1427	 38.41	0	1504709..1505023	-	104	116618601	-	LEUM_1507	-	Thiol-disulfide isomerase and thioredoxin
1428	 35.30	0	1505013..1505672	-	219	116618602	-	LEUM_1508	-	thiamine pyrophosphokinase
1429	 40.33	0	1505672..1506328	-	218	116618603	-	LEUM_1509	-	ribulose-5-phosphate 3-epimerase
1430	 38.51	0	1506342..1507229	-	295	116618604	-	LEUM_1510	-	GTPase
1431	 38.89	0	1507281..1509206	-	641	116618605	-	LEUM_1511	-	serine/threonine kinase protein
37.86	MEAN

3.35	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.