version 1.0
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 629 35.38 0 648348..648737 + 129 183220056 - LEPBI_I0643 - hypothetical protein 630 39.85 0 648747..649559 + 270 183220057 - LEPBI_I0644 - putative transketolase (TK) 631 37.81 0 649608..650501 + 297 183220058 - LEPBI_I0645 - hypothetical protein 632 35.43 0 650505..651458 + 317 183220059 ispA2 LEPBI_I0646 - octoprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase; OPP synthetase) 633 35.89 0 651483..653669 - 728 183220060 - LEPBI_I0647 - putative two-component sensor protein; putative membrane protein; putative signal peptide 634 41.39 0 653692..654411 - 239 183220061 - LEPBI_I0648 - hypothetical protein 635 41.43 0 654491..656305 + 604 183220062 - LEPBI_I0649 - putative voltage-gated ClC-type chloride channel eriC; putative membrane protein 636 35.21 0 656302..656886 + 194 183220063 - LEPBI_I0650 - putative signal peptide 637 35.48 0 656888..658474 + 528 183220064 - LEPBI_I0651 - hypothetical protein 638 43.11 +1 658471..659421 + 316 183220065 - LEPBI_I0652 - putative alpha-L-glutamate ligase 639 44.44 +1 659431..659943 - 170 183220066 - LEPBI_I0653 - hypothetical protein 640 42.50 0 660028..660900 + 290 183220067 - LEPBI_I0654 - putative nucleoside triphosphate pyrophosphohydrolase and pyrophosphatase MazG 641 40.46 0 660937..661329 + 130 183220068 - LEPBI_I0655 - hypothetical protein 642 32.70 -1 661330..661800 + 156 183220069 - LEPBI_I0656 - hypothetical protein 643 42.97 +1 661934..662992 - 352 183220070 lpxD2 LEPBI_I0657 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 644 43.61 +1 663086..663523 - 145 183220071 - LEPBI_I0658 - hypothetical protein 645 45.64 +1 663605..664246 - 213 183220072 - LEPBI_I0659 - putative riboflavin biosynthesis protein RibD:riboflavin-specific deaminase 646 42.26 0 664552..665907 + 451 183220073 - LEPBI_I0660 - major facilitator superfamily permease 647 39.47 0 665904..666131 + 75 183220074 - LEPBI_I0661 - hypothetical protein 648 39.01 0 666156..666965 - 269 183220075 - LEPBI_I0662 - putative signal peptide 649 46.23 +1 667034..668080 - 348 183220076 - LEPBI_I0663 - putative triacylglycerol lipase 650 39.77 0 668080..669570 - 496 183220077 - LEPBI_I0664 - hypothetical protein 651 35.76 0 669578..670567 - 329 183220078 - LEPBI_I0665 - hypothetical protein 652 41.76 0 670631..671413 + 260 183220079 - LEPBI_I0666 - hypothetical protein 653 38.29 0 671416..671778 - 120 183220080 - LEPBI_I0667 - putative signal peptide 654 38.36 0 671810..673063 - 417 183220081 - LEPBI_I0668 - major facilitator superfamily permease 655 40.68 0 673067..673747 - 226 183220082 hmuO LEPBI_I0669 - Heme oxygenase 656 44.39 +1 673828..674958 - 376 183220083 - LEPBI_I0670 - hypothetical protein 657 38.74 0 674955..675731 - 258 183220084 - LEPBI_I0671 - hypothetical protein 658 37.04 0 675974..677401 - 475 183220085 - LEPBI_I0673 - hypothetical protein 659 37.65 0 677667..680495 - 942 183220086 polA LEPBI_I0674 - DNA polymerase I (POL I) 660 38.66 0 680492..681598 - 368 183220087 - LEPBI_I0675 - glycosyl transferase 661 43.33 +1 681600..682229 - 209 183220088 - LEPBI_I0676 - hypothetical protein 662 42.86 0 682296..683849 - 517 183220089 gltX LEPBI_I0677 - glutamyl-tRNA synthetase (glutamate--tRNA ligase; GluRS) 663 35.97 0 683846..684718 - 290 183220090 - LEPBI_I0678 - hypothetical protein 664 39.11 0 684784..686169 + 461 183220091 gyrA2 LEPBI_I0679 - DNA gyrase/topoisomerase, type IV, subunit A 665 40.67 0 686176..688302 + 708 183220092 gyrB2 LEPBI_I0680 - DNA gyrase/topoisomerase, type IIA, subunit B 666 40.82 0 688380..690368 + 662 183220093 - LEPBI_I0681 - putative penicillin binding protein, beta-lactamase class C 667 37.88 0 690465..690926 - 153 183220094 - LEPBI_I0682 - hypothetical protein 668 38.38 0 690939..691334 - 131 183220095 - LEPBI_I0683 - putative lipoprotein; putative signal peptide 669 41.73 0 691394..692203 - 269 183220096 - LEPBI_I0684 - hypothetical protein 670 39.52 0 692347..694287 + 646 183220097 - LEPBI_I0685 - hypothetical protein 671 39.45 0 694388..695728 - 446 183220098 - LEPBI_I0686 - hypothetical protein 672 39.92 0 695730..696503 - 257 183220099 - LEPBI_I0687 - oxidoreductase 673 37.53 0 696500..696928 - 142 183220100 rimL LEPBI_I0688 - ribosomal-protein-alanine acetyltransferase 674 41.29 0 696979..697896 + 305 183220101 - LEPBI_I0689 - hypothetical protein 675 41.32 0 697908..698834 + 308 183220102 - LEPBI_I0690 - DNA processing chain DprA 676 47.15 +2 698824..699858 - 344 183220103 - LEPBI_I0691 - putative cation exchanger; putative membrane protein 677 40.71 0 699875..700498 + 207 183220104 - LEPBI_I0692 - hypothetical protein 678 44.18 +1 700693..702960 - 755 183220105 - LEPBI_I0693 - lysine decarboxylase 679 39.89 0 703009..705327 - 772 183220106 - LEPBI_I0694 - hypothetical protein 680 43.69 +1 705324..706598 - 424 183220107 - LEPBI_I0695 - putative valine--pyruvate transaminase 681 37.81 0 706732..707826 + 364 183220108 - LEPBI_I0696 - DegT/DnrJ/EryC1/StrS family aminotransferase 682 39.09 0 707926..708984 + 352 183220109 - LEPBI_I0697 - hypothetical protein 683 40.03 0 708996..709607 - 203 183220110 - LEPBI_I0698 - hypothetical protein 684 35.49 0 709836..710159 + 107 183220111 - LEPBI_I0699 - putative divalent ion tolerance protein CutA1; cytochrome c biogenesis 685 35.50 0 710129..710866 - 245 183220112 - LEPBI_I0700 - hypothetical protein 686 36.48 0 710967..712172 + 401 183220113 - LEPBI_I0701 - M23B family peptidase 687 34.49 -1 712169..713377 + 402 183220114 - LEPBI_I0702 - M23B family peptidase 688 43.47 +1 713540..713914 + 124 183220115 - LEPBI_I0703 - hypothetical protein 689 35.96 0 713911..715167 - 418 183220116 - LEPBI_I0704 - putative signal peptide 690 33.57 -1 715174..716013 - 279 183220117 - LEPBI_I0705 - hypothetical protein 691 37.62 0 716149..717012 + 287 183220118 - LEPBI_I0706 - hypothetical protein 692 43.86 +1 717252..718571 - 439 183220119 - LEPBI_I0707 - putative acetyl-CoA acetyltransferase (acetoacetyl-CoA thiolase); putative signal peptide 693 44.51 +1 718620..719621 - 333 183220120 ilvC LEPBI_I0708 - ketol-acid reductoisomerase 694 43.97 +1 719914..720261 + 115 183220121 - LEPBI_I0709 - hypothetical protein 695 41.37 0 720266..720850 + 194 183220122 - LEPBI_I0710 - hypothetical protein 696 35.65 0 720867..721556 + 229 183220123 - LEPBI_I0711 - hypothetical protein 697 36.92 0 721616..722089 + 157 183220124 - LEPBI_I0712 - putative protein with phosphopantetheine attachment site 698 41.14 0 722166..723869 - 567 183220125 - LEPBI_I0713 - putative phosphoserine phosphatase; putative membrane protein 699 38.39 0 723898..725775 - 625 183220126 - LEPBI_I0714 - ABC-type transport system, ATP binding protein 700 37.80 0 725815..729309 - 1164 183220127 - LEPBI_I0715 - putative two-component sensor protein 701 37.93 0 729363..731975 + 870 183220128 - LEPBI_I0716 - putative signal peptide 702 40.77 0 732192..733562 + 456 183220129 - LEPBI_I0717 - hemolysin-related CBS regulatory domain 703 44.26 +1 733563..734093 + 176 183220130 dfpA LEPBI_I0718 - phosphopantothenoylcysteine decarboxylase (PPCDC; CoaC) 704 40.56 0 734090..734767 + 225 183220131 dfpB LEPBI_I0719 - phosphopantothenate--cysteine ligase 705 35.01 0 734753..735109 - 118 183220132 - LEPBI_I0720 - hypothetical protein 706 41.67 0 735265..736020 - 251 183220133 - LEPBI_I0721 - putative NAD-dependent deacetylase 707 40.85 0 736095..737264 + 389 183220134 bioF LEPBI_I0722 - 8-amino-7-oxononanoate synthase 708 37.00 0 737359..737931 - 190 183220135 ccmH LEPBI_I0723 - cytochrome c-type biogenesis protein CcmH; putative membrane protein 709 40.10 0 737934..740135 - 733 183220136 ccmF LEPBI_I0724 - cytochrome c-type biogenesis protein CcmF 710 41.48 0 740132..740524 - 130 183220137 ccmE LEPBI_I0725 - cytochrome-c biosynthesis protein CcmE 711 38.10 0 740627..741403 - 258 183220138 - LEPBI_I0726 - hypothetical protein 712 43.31 +1 741432..741872 - 146 183220139 - LEPBI_I0727 - hypothetical protein 713 41.76 0 741925..742731 + 268 183220140 - LEPBI_I0728 - putative hydrolase 714 41.46 0 742778..744253 + 491 183220141 - LEPBI_I0729 - putative signal peptide 715 39.94 0 744275..745819 + 514 183220142 hutH LEPBI_I0730 - histidine ammonia-lyase (Histidase) 716 39.63 0 745785..746768 - 327 183220143 - LEPBI_I0731 - hypothetical protein 717 36.67 0 746796..747875 - 359 183220144 - LEPBI_I0732 - phospho-N-acetylmuramoyl-pentapeptide-transferase 718 43.73 +1 747953..748837 + 294 183220145 dapA LEPBI_I0733 - dihydrodipicolinate synthase (DHDPS) 719 41.42 0 748830..749633 + 267 183220146 dapB LEPBI_I0734 - dihydrodipicolinate reductase (dhpr) 720 40.79 0 749635..750465 + 276 183220147 - LEPBI_I0735 - hypothetical protein 721 38.03 0 750486..751508 + 340 183220148 - LEPBI_I0736 - hypothetical protein 722 37.24 0 751610..752506 - 298 183220149 - LEPBI_I0737 - alpha/beta family hydrolase 723 40.12 0 752584..755145 + 853 183220150 - LEPBI_I0738 - adenylate cyclase family protein 724 42.50 0 755184..756884 - 566 183220151 fliF LEPBI_I0739 - flagellar M-ring FliF protein 725 43.78 +1 757029..757277 + 82 183220152 - LEPBI_I0740 - putative PemI family protein 726 37.35 0 757271..757594 + 107 183220153 - LEPBI_I0741 - putative PemK family protein 727 43.90 +1 757654..759120 - 488 183220154 hemL2 LEPBI_I0742 - glutamate-1-semialdehyde 2,1-aminomutase 728 39.88 0 759288..759944 + 218 183220155 - LEPBI_I0743 - putative transcriptional regulator 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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