version 1.0
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 571 40.56 0 582760..584682 + 640 183219998 fliD LEPBI_I0580 - flagellar hook-associated protein 2 572 38.21 0 584679..585641 + 320 183219999 - LEPBI_I0581 - hypothetical protein 573 39.35 0 585638..585853 - 71 183220000 - LEPBI_I0582 - hypothetical protein 574 37.30 0 585948..586805 + 285 183220001 - LEPBI_I0583 - putative dehalogenase-like hydrolase 575 40.85 0 586779..587630 - 283 183220002 - LEPBI_I0584 - putative S-adenosyl-L-methionine-dependent methyltransferase 576 44.48 +1 587723..588583 + 286 183220003 dapF LEPBI_I0585 - diaminopimelate epimerase (DAP epimerase) 577 42.32 0 588615..589337 - 240 183220004 - LEPBI_I0586 - putative acyltransferase 578 42.92 +1 589339..589776 - 145 183220005 - LEPBI_I0587 - hypothetical protein 579 40.66 0 589858..590376 + 172 183220006 - LEPBI_I0589 - hypothetical protein 580 41.59 0 590387..590701 - 104 183220007 - LEPBI_I0590 - hypothetical protein 581 37.38 0 590724..592304 - 526 183220008 - LEPBI_I0591 - putative adenylate cyclase; putative membrane protein; putative signal peptide 582 38.60 0 592312..593697 - 461 183220009 - LEPBI_I0592 - major facilitator superfamily permease 583 36.48 0 593799..595610 - 603 183220010 - LEPBI_I0593 - hypothetical protein 584 36.26 0 595642..597933 - 763 183220011 - LEPBI_I0594 - hypothetical protein 585 38.59 0 598089..599780 + 563 183220012 - LEPBI_I0595 - putative aerotaxis sensor receptor; putative membrane protein 586 43.68 +1 599810..600244 + 144 183220013 - LEPBI_I0596 - hypothetical protein 587 42.18 0 600380..600820 - 146 183220014 - LEPBI_I0597 - hypothetical protein 588 43.60 +1 600825..602090 - 421 183220015 fadA2 LEPBI_I0598 - 3-ketoacyl-CoA thiolase 589 43.33 +1 602104..603414 - 436 183220016 fadB2 LEPBI_I0599 - 3-hydroxyacyl-CoA dehydrogenase, NAD binding FadB; putative signal peptide 590 30.23 -2 604024..604635 + 203 183220017 - LEPBI_I0600 - hypothetical protein 591 32.73 -1 604632..605132 + 166 183220018 - LEPBI_I0601 - hypothetical protein 592 37.42 0 605329..605817 - 162 183220019 - LEPBI_I0602 - hypothetical protein 593 40.80 0 605848..606798 - 316 183220020 dusC LEPBI_I0604 - tRNA-dihydrouridine synthase C 594 39.51 0 606806..608569 - 587 183220021 ilvI LEPBI_I0605 - acetolactate synthase large subunit 595 40.02 0 608599..610212 - 537 183220022 - LEPBI_I0606 - putative FAD binding dehydrogenase 596 35.78 0 610619..611476 + 285 183220023 - LEPBI_I0607 - hypothetical protein 597 31.90 -1 611478..613922 + 814 183220024 - LEPBI_I0608 - hypothetical protein 598 37.16 0 613929..614477 + 182 183220025 - LEPBI_I0609 - putative NADPH-dependent FMN reductase 599 38.92 0 615071..616108 + 345 183220026 - LEPBI_I0611 - hypothetical protein 600 33.81 -1 616127..617809 + 560 183220027 - LEPBI_I0612 - hypothetical protein 601 37.10 0 617813..618874 + 353 183220028 - LEPBI_I0614 - hypothetical protein 602 35.20 0 618941..619528 + 195 183220029 - LEPBI_I0615 - putative oxidoreductase 603 33.67 -1 619530..620426 + 298 183220030 - LEPBI_I0616 - alpha/beta family hydrolase 604 32.60 -1 620428..620976 + 182 183220031 - LEPBI_I0617 - PadR family transcriptional regulator 605 33.80 -1 621042..623192 + 716 183220032 - LEPBI_I0618 - putative two-component sensor protein; putative signal peptide 606 31.79 -1 623380..624351 + 323 183220033 - LEPBI_I0619 - hypothetical protein 607 33.17 -1 624360..624971 + 203 183220034 - LEPBI_I0620 - hypothetical protein 608 30.49 -2 624961..625488 + 175 183220035 - LEPBI_I0621 - hypothetical protein 609 34.74 0 625485..626408 + 307 183220036 - LEPBI_I0622 - alpha/beta family hydrolase 610 35.88 0 626405..627112 + 235 183220037 - LEPBI_I0623 - SDR family dehydrogenase 611 36.78 0 627114..627635 - 173 183220038 - LEPBI_I0624 - putative cyclic-nucleotide binding protein 612 37.24 0 627625..628059 - 144 183220039 - LEPBI_I0625 - putative cyclic nucleotide-binding protein 613 34.88 0 628059..629999 - 646 183220040 - LEPBI_I0626 - ankyrin repeat-containing protein 614 38.16 0 629996..631549 - 517 183220041 - LEPBI_I0627 - M23 family metalloendopeptidase 615 37.19 0 631601..632119 - 172 183220042 - LEPBI_I0628 - LuxR family transcriptional regulator 616 42.24 0 632185..632577 + 130 183220043 - LEPBI_I0629 - hypothetical protein 617 33.52 -1 632590..634677 - 695 183220044 - LEPBI_I0631 - putative adenylate cyclase 618 36.09 0 634674..638411 - 1245 183220045 - LEPBI_I0632 - putative adenylate cyclase; putative membrane protein; putative signal peptide 619 35.74 0 638462..639460 - 332 183220046 - LEPBI_I0633 - putative DNA repair photolyase 620 37.72 0 639453..640319 - 288 183220047 - LEPBI_I0634 - hypothetical protein 621 37.76 0 640416..640889 + 157 183220048 - LEPBI_I0635 - putative glutathione peroxidase 622 38.48 0 640933..641748 + 271 183220049 - LEPBI_I0636 - putative signal peptide 623 41.50 0 641764..644346 + 860 183220050 mrcA LEPBI_I0637 - penicillin-binding protein 1A (PBP-1a; PBP1a) 624 36.07 0 644347..645333 + 328 183220051 - LEPBI_I0638 - hypothetical protein 625 40.34 0 645333..645803 + 156 183220052 - LEPBI_I0639 - hypothetical protein 626 36.34 0 646210..646542 + 110 183220053 - LEPBI_I0640 - hypothetical protein 627 32.50 -1 647104..647343 + 79 183220054 - LEPBI_I0641 - putative nucleotidyltransferase protein 628 26.78 -2 647333..647683 + 116 183220055 - LEPBI_I0642 - putative nucleotidyltransferase 629 35.38 0 648348..648737 + 129 183220056 - LEPBI_I0643 - hypothetical protein 630 39.85 0 648747..649559 + 270 183220057 - LEPBI_I0644 - putative transketolase (TK) 631 37.81 0 649608..650501 + 297 183220058 - LEPBI_I0645 - hypothetical protein 632 35.43 0 650505..651458 + 317 183220059 ispA2 LEPBI_I0646 - octoprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase; OPP synthetase) 633 35.89 0 651483..653669 - 728 183220060 - LEPBI_I0647 - putative two-component sensor protein; putative membrane protein; putative signal peptide 634 41.39 0 653692..654411 - 239 183220061 - LEPBI_I0648 - hypothetical protein 635 41.43 0 654491..656305 + 604 183220062 - LEPBI_I0649 - putative voltage-gated ClC-type chloride channel eriC; putative membrane protein 636 35.21 0 656302..656886 + 194 183220063 - LEPBI_I0650 - putative signal peptide 637 35.48 0 656888..658474 + 528 183220064 - LEPBI_I0651 - hypothetical protein 638 43.11 +1 658471..659421 + 316 183220065 - LEPBI_I0652 - putative alpha-L-glutamate ligase 639 44.44 +1 659431..659943 - 170 183220066 - LEPBI_I0653 - hypothetical protein 640 42.50 0 660028..660900 + 290 183220067 - LEPBI_I0654 - putative nucleoside triphosphate pyrophosphohydrolase and pyrophosphatase MazG 641 40.46 0 660937..661329 + 130 183220068 - LEPBI_I0655 - hypothetical protein 642 32.70 -1 661330..661800 + 156 183220069 - LEPBI_I0656 - hypothetical protein 643 42.97 +1 661934..662992 - 352 183220070 lpxD2 LEPBI_I0657 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 644 43.61 +1 663086..663523 - 145 183220071 - LEPBI_I0658 - hypothetical protein 645 45.64 +1 663605..664246 - 213 183220072 - LEPBI_I0659 - putative riboflavin biosynthesis protein RibD:riboflavin-specific deaminase 646 42.26 0 664552..665907 + 451 183220073 - LEPBI_I0660 - major facilitator superfamily permease 647 39.47 0 665904..666131 + 75 183220074 - LEPBI_I0661 - hypothetical protein 648 39.01 0 666156..666965 - 269 183220075 - LEPBI_I0662 - putative signal peptide 649 46.23 +1 667034..668080 - 348 183220076 - LEPBI_I0663 - putative triacylglycerol lipase 650 39.77 0 668080..669570 - 496 183220077 - LEPBI_I0664 - hypothetical protein 651 35.76 0 669578..670567 - 329 183220078 - LEPBI_I0665 - hypothetical protein 652 41.76 0 670631..671413 + 260 183220079 - LEPBI_I0666 - hypothetical protein 653 38.29 0 671416..671778 - 120 183220080 - LEPBI_I0667 - putative signal peptide 654 38.36 0 671810..673063 - 417 183220081 - LEPBI_I0668 - major facilitator superfamily permease 655 40.68 0 673067..673747 - 226 183220082 hmuO LEPBI_I0669 - Heme oxygenase 656 44.39 +1 673828..674958 - 376 183220083 - LEPBI_I0670 - hypothetical protein 657 38.74 0 674955..675731 - 258 183220084 - LEPBI_I0671 - hypothetical protein 658 37.04 0 675974..677401 - 475 183220085 - LEPBI_I0673 - hypothetical protein 659 37.65 0 677667..680495 - 942 183220086 polA LEPBI_I0674 - DNA polymerase I (POL I) 660 38.66 0 680492..681598 - 368 183220087 - LEPBI_I0675 - glycosyl transferase 661 43.33 +1 681600..682229 - 209 183220088 - LEPBI_I0676 - hypothetical protein 662 42.86 0 682296..683849 - 517 183220089 gltX LEPBI_I0677 - glutamyl-tRNA synthetase (glutamate--tRNA ligase; GluRS) 663 35.97 0 683846..684718 - 290 183220090 - LEPBI_I0678 - hypothetical protein 664 39.11 0 684784..686169 + 461 183220091 gyrA2 LEPBI_I0679 - DNA gyrase/topoisomerase, type IV, subunit A 665 40.67 0 686176..688302 + 708 183220092 gyrB2 LEPBI_I0680 - DNA gyrase/topoisomerase, type IIA, subunit B 666 40.82 0 688380..690368 + 662 183220093 - LEPBI_I0681 - putative penicillin binding protein, beta-lactamase class C 667 37.88 0 690465..690926 - 153 183220094 - LEPBI_I0682 - hypothetical protein 668 38.38 0 690939..691334 - 131 183220095 - LEPBI_I0683 - putative lipoprotein; putative signal peptide 669 41.73 0 691394..692203 - 269 183220096 - LEPBI_I0684 - hypothetical protein 670 39.52 0 692347..694287 + 646 183220097 - LEPBI_I0685 - hypothetical protein 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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