version 1.0
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 448 43.06 +1 451926..452891 + 321 183219875 pfaP LEPBI_I0456 - peptidase PfaP (periplasmic flagella-associated protein; PF-associated peptidase) 449 36.45 0 452888..453496 + 202 183219876 - LEPBI_I0457 - hypothetical protein 450 43.41 +1 453497..454240 + 247 183219877 surE LEPBI_I0458 - 5'-nucleotidase SurE 451 39.43 0 454243..454914 + 223 183219878 - LEPBI_I0459 - TPR repeat-containing protein 452 34.57 -1 455964..457340 + 458 183219879 - LEPBI_I0461 - hypothetical protein 453 40.86 0 457418..457603 + 61 183219880 - LEPBI_I0462 - hypothetical protein 454 35.29 0 457793..459841 + 682 183219881 - LEPBI_I0463 - putative methyl-accepting chemotaxis protein; putative signal peptide 455 42.11 0 459903..460529 + 208 183219882 - LEPBI_I0464 - putative signal peptide 456 35.17 0 460633..461559 + 308 183219883 - LEPBI_I0465 - hypothetical protein 457 30.89 -1 461585..462199 + 204 183219884 - LEPBI_I0466 - putative two-component sensor protein 458 30.86 -1 462358..463569 - 403 183219885 - LEPBI_I0467 - putative acyltransferase; putative membrane protein 459 39.73 0 463750..464046 + 98 183219886 - LEPBI_I0468 - hypothetical protein 460 32.09 -1 464228..464629 - 133 183219887 - LEPBI_I0469 - hypothetical protein 461 33.45 -1 464631..465524 - 297 183219888 - LEPBI_I0470 - hypothetical protein 462 36.29 0 465708..466994 - 428 183219889 - LEPBI_I0471 - putative integrase/recombinase 463 32.41 -1 467111..467326 + 71 183219890 - LEPBI_I0472 - hypothetical protein 464 42.13 0 467471..469072 - 533 183219891 nadB LEPBI_I0473 - L-aspartate oxidase (LASPO; quinolinate synthetase B) 465 38.21 0 469124..470968 - 614 183219892 - LEPBI_I0474 - S41 family peptidase 466 43.83 +1 471060..472088 + 342 183219893 - LEPBI_I0475 - hypothetical protein 467 41.25 0 472054..472836 - 260 183219894 pdxJ LEPBI_I0476 - pyridoxal phosphate biosynthetic protein PdxJ (PNP synthase) 468 45.63 +1 472941..473444 + 167 183219895 - LEPBI_I0477 - hypothetical protein 469 43.77 +1 473441..474331 + 296 183219896 miaA LEPBI_I0478 - tRNA delta(2)-isopentenylpyrophosphate transferase 470 36.51 0 474353..474604 + 83 183219897 hfq LEPBI_I0479 - RNA-binding protein Hfq 471 42.20 0 474657..475727 + 356 183219898 manC LEPBI_I0480 - mannose-1-phosphate guanylyltransferase [GDP] (GDP-mannose pyrophosphorylase; GMP) 472 45.53 +1 476055..476636 + 193 183219899 - LEPBI_I0481 - hypothetical protein 473 42.35 0 476657..477133 + 158 183219900 - LEPBI_I0482 - putative chemotaxis protein CheW 474 41.70 0 477167..477883 + 238 183219901 - LEPBI_I0483 - putative transport system 475 33.84 -1 478194..479969 + 591 183219902 - LEPBI_I0484 - putative methyl-accepting chemotaxis protein; putative membrane protein 476 35.19 0 479966..480289 + 107 183219903 - LEPBI_I0485 - hypothetical protein 477 32.29 -1 480329..480424 - 31 183219904 - LEPBI_I0486 - putative two-component response regulator 478 36.07 0 480441..482231 - 596 183219905 - LEPBI_I0487 - putative two-component sensor protein 479 35.28 0 482500..483168 - 222 183219906 - LEPBI_I0488 - hypothetical protein 480 37.08 0 483294..485324 + 676 183219907 - LEPBI_I0489 - TPR repeat-containing protein 481 36.65 0 485308..485880 - 190 183219908 - LEPBI_I0490 - hypothetical protein 482 36.51 0 485912..486100 - 62 183219909 - LEPBI_I0491 - hypothetical protein 483 38.27 0 486107..487240 - 377 183219910 - LEPBI_I0492 - putative signal peptide 484 33.55 -1 487237..487701 - 154 183219911 - LEPBI_I0493 - polyglutamyl synthetase CapC family protein 485 37.51 0 487694..488890 - 398 183219912 - LEPBI_I0494 - polyglutamyl synthetase CapB family protein 486 36.50 0 488975..491371 + 798 183219913 - LEPBI_I0495 - hypothetical protein 487 38.35 0 491412..491750 - 112 183219914 - LEPBI_I0496 - putative anti-sigma-B factor antagonist (anti-anti-sigma-B factor) 488 36.26 0 491795..493843 - 682 183219915 - LEPBI_I0497 - putative penicillin-binding protein, transpeptidase 489 39.99 0 493858..495510 - 550 183219916 gpmI LEPBI_I0498 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 490 39.53 0 495546..496739 - 397 183219917 - LEPBI_I0499 - hypothetical protein 491 37.23 0 496739..498817 - 692 183219918 - LEPBI_I0500 - putative TonB-dependent outer membrane receptor; putative signal peptide 492 40.21 0 498841..499902 + 353 183219919 - LEPBI_I0501 - carbohydrate kinase PfkB family 493 39.14 0 499916..500311 - 131 183219920 - LEPBI_I0502 - putative two-component response regulator 494 38.22 0 500308..501822 - 504 183219921 - LEPBI_I0503 - sensor protein 495 38.39 0 501855..502784 + 309 183219922 - LEPBI_I0504 - ABC-type transport system, ATPase 496 37.57 0 502781..503512 + 243 183219923 - LEPBI_I0505 - ABC-type transport system, permease; putative membrane protein 497 38.09 0 503516..505387 + 623 183219924 - LEPBI_I0506 - hypothetical protein 498 38.73 0 505384..506457 + 357 183219925 - LEPBI_I0507 - hypothetical protein 499 38.54 0 506459..507073 + 204 183219926 - LEPBI_I0508 - hypothetical protein 500 40.07 0 507070..508464 + 464 183219927 mpl LEPBI_I0509 - UDP-n-acetylmuramate:l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase 501 43.47 +1 508461..509486 + 341 183219928 pheS LEPBI_I0510 - phenylalanyl-tRNA synthetase alpha chain (phenylalanine--tRNA ligase alpha chain; PheRS) 502 44.18 +1 509530..511059 - 509 183219929 - LEPBI_I0511 - putative thiolase 503 37.61 0 511075..511869 - 264 183219930 - LEPBI_I0512 - hypothetical protein 504 38.33 0 511866..513005 - 379 183219931 - LEPBI_I0513 - hypothetical protein 505 39.65 0 513002..513286 - 94 183219932 - LEPBI_I0514 - hypothetical protein 506 40.58 0 513407..513682 + 91 183219933 rpsT LEPBI_I0515 - 30S ribosomal protein S20 507 38.34 0 513965..515341 + 458 183219934 - LEPBI_I0516 - putative phosphomannomutase/phosphoglucomutase (PMM/PGM) 508 40.58 0 515326..517161 + 611 183219935 glmS LEPBI_I0517 - glucosamine--fructose-6-phosphate aminotransferase 509 35.95 0 517165..518196 + 343 183219936 rfbA LEPBI_I0518 - glucose-1-phosphate thymidylyltransferase 510 34.66 -1 518200..519105 + 301 183219937 - LEPBI_I0519 - alpha/beta family hydrolase 511 41.57 0 519107..520708 + 533 183219938 - LEPBI_I0520 - Acetyl-coenzyme A carboxyltransferase 512 40.00 0 520753..521112 + 119 183219939 - LEPBI_I0521 - anti-sigma factor antagonist 513 44.97 +1 521100..521666 - 188 183219940 - LEPBI_I0522 - ThiJ/PfpI family peptidase 514 45.08 +1 521784..522941 + 385 183219941 - LEPBI_I0523 - putative serine-type endopeptidase; putative signal peptide 515 48.93 +2 522943..523968 + 341 183219942 ruvB LEPBI_I0524 - Holliday junction DNA helicase RuvB 516 42.31 0 523976..524866 + 296 183219943 - LEPBI_I0525 - hypothetical protein 517 36.22 0 524873..525184 - 103 183219944 - LEPBI_I0526 - putative signal peptide 518 40.19 0 525189..526370 - 393 183219945 - LEPBI_I0527 - putative penicillin-binding protein, transpeptidase; putative signal peptide 519 37.20 0 526444..526857 - 137 183219946 sufE LEPBI_I0528 - putative Fe-S cluster assembly protein 520 31.69 -1 526841..527206 - 121 183219947 - LEPBI_I0529 - hypothetical protein 521 39.04 0 527203..528219 - 338 183219948 - LEPBI_I0530 - hypothetical protein 522 46.67 +1 528290..528469 + 59 183219949 - LEPBI_I0531 - hypothetical protein 523 34.66 -1 528471..528998 + 175 183219950 - LEPBI_I0532 - putative signal peptide 524 38.37 0 528999..529613 + 204 183219951 - LEPBI_I0533 - putative methyltransferase 525 39.85 0 529657..531774 + 705 183219952 pbpC LEPBI_I0534 - penicillin-binding protein 1C, transpeptidase and transglycosylase 526 38.73 0 531780..532205 + 141 183219953 - LEPBI_I0535 - putative thioesterase 527 36.37 0 532202..533485 + 427 183219954 - LEPBI_I0536 - putative phosphoserine phosphatase 528 36.85 0 533482..534618 + 378 183219955 - LEPBI_I0537 - hypothetical protein 529 36.17 0 534732..536177 - 481 183219956 - LEPBI_I0538 - putative FAD-linked oxidase 530 40.37 0 536179..536931 - 250 183219957 - LEPBI_I0539 - SDR family dehydrogenase 531 40.72 0 536983..537483 + 166 183219958 - LEPBI_I0540 - hypothetical protein 532 35.77 0 537485..538963 + 492 183219959 - LEPBI_I0541 - putative alginate o-acetyltransferase; putative membrane protein 533 34.43 -1 538973..540070 + 365 183219960 - LEPBI_I0542 - hypothetical protein 534 41.88 0 540043..540639 - 198 183219961 - LEPBI_I0543 - hypothetical protein 535 35.53 0 540692..541876 - 394 183219962 - LEPBI_I0544 - hypothetical protein 536 34.02 -1 541873..543774 - 633 183219963 - LEPBI_I0545 - hypothetical protein 537 36.46 0 543771..545624 - 617 183219964 - LEPBI_I0546 - adenylate/guanylate cyclase family protein 3 538 40.67 0 545702..547009 - 435 183219965 - LEPBI_I0547 - hypothetical protein 539 45.63 +1 547009..547569 - 186 183219966 - LEPBI_I0548 - putative signal peptide 540 44.53 +1 547619..548413 - 264 183219967 truA LEPBI_I0549 - tRNA pseudouridine synthase A 541 44.03 +1 548418..549296 - 292 183219968 - LEPBI_I0550 - hypothetical protein 542 40.49 0 549448..550551 + 367 183219969 - LEPBI_I0551 - putative signal peptide 543 37.31 0 550648..551451 + 267 183219970 - LEPBI_I0552 - putative phospholipid/glycerol acyltransferase 544 39.84 0 551448..552446 - 332 183219971 - LEPBI_I0553 - putative tyrosine specific protein phosphatase 545 37.38 0 552436..553818 - 460 183219972 - LEPBI_I0554 - hypothetical protein 546 42.54 0 553865..554179 + 104 183219973 - LEPBI_I0555 - hypothetical protein 547 35.78 0 554159..556159 - 666 183219974 - LEPBI_I0556 - phosphoglycerol transferase 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0